Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51562 | Soybean | nucleus | 91.14 | 85.29 |
| Bra008259.1-P | Field mustard | cytosol | 42.86 | 46.88 |
| CDY45986 | Canola | cytosol | 42.86 | 46.88 |
| CDY20411 | Canola | cytosol | 42.86 | 46.73 |
| CDX88273 | Canola | cytosol | 44.86 | 46.59 |
| Bra015750.1-P | Field mustard | cytosol | 44.57 | 46.57 |
| CDX87602 | Canola | cytosol | 44.57 | 46.57 |
| AT1G76420.1 | Thale cress | cytosol | 44.29 | 46.41 |
| PGSC0003DMT400025690 | Potato | nucleus | 44.0 | 43.38 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 38.86 | 42.9 |
| EES14261 | Sorghum | nucleus | 37.71 | 38.71 |
| TraesCS7D01G246100.1 | Wheat | cytosol | 36.86 | 38.51 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 46.57 | 38.35 |
| Os08t0511200-00 | Rice | cytosol | 38.0 | 38.33 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 36.57 | 38.32 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 36.86 | 38.28 |
| KRH48487 | Soybean | nucleus | 35.43 | 38.27 |
| KRH41635 | Soybean | nucleus | 33.43 | 37.38 |
| KRH27280 | Soybean | nucleus | 36.29 | 37.03 |
| KRH60340 | Soybean | nucleus | 33.71 | 36.76 |
| KRH39185 | Soybean | nucleus | 34.57 | 36.56 |
| KRH22042 | Soybean | nucleus | 36.57 | 36.36 |
| KRH03497 | Soybean | nucleus | 36.29 | 36.29 |
| KRH56898 | Soybean | nucleus | 36.29 | 36.29 |
| KRH63309 | Soybean | nucleus | 36.57 | 35.85 |
| KRH54575 | Soybean | nucleus | 36.29 | 35.57 |
| KRH26232 | Soybean | nucleus | 36.86 | 35.25 |
| KRH40061 | Soybean | nucleus | 36.29 | 34.99 |
| KRH13649 | Soybean | nucleus | 30.29 | 34.98 |
| KRH43817 | Soybean | nucleus | 30.0 | 34.77 |
| KRG93561 | Soybean | nucleus | 35.43 | 34.25 |
| KRH61984 | Soybean | nucleus | 34.86 | 34.17 |
| KRH55187 | Soybean | nucleus | 36.57 | 34.13 |
| KRH18465 | Soybean | nucleus | 34.86 | 34.08 |
| KRH52643 | Soybean | cytoskeleton, cytosol, nucleus | 34.29 | 33.8 |
| KRH16201 | Soybean | cytoskeleton, cytosol, nucleus | 35.43 | 33.24 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 27.71 | 32.77 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 27.43 | 32.65 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 26.57 | 31.42 |
| Zm00001d031463_P002 | Maize | mitochondrion | 37.43 | 31.04 |
| KRH01200 | Soybean | mitochondrion, nucleus | 34.29 | 30.93 |
| KRG94783 | Soybean | nucleus | 35.14 | 30.37 |
| KRH06738 | Soybean | nucleus | 34.86 | 29.98 |
| KRH70130 | Soybean | nucleus | 34.57 | 29.51 |
| KRH08479 | Soybean | nucleus | 34.57 | 29.51 |
Protein Annotations
| EntrezGene:100808967 | MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:ACUP02002142 | EnsemblPlantsGene:GLYMA_04G014900 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:K7KHL1 | EnsemblPlants:KRH60880 |
| ProteinID:KRH60880 | ProteinID:KRH60880.1 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF50 | SUPFAM:SSF101941 | UniParc:UPI000233A6A3 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:+:1134897..1137831
Molecular Weight (calculated)
39924.4 Da
IEP (calculated)
7.979
GRAVY (calculated)
-0.567
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAMEELLCE LSDHEKRNEQ GLPPGFRFHP TDEELITFYL ASKVFNDTFS NLKFAEVDLN RCEPWELPDV AKMGEREWYL FSLRDRKYPT GLRTNRATGA
101: GYWKATGKDK EVYSASSGTL LGMKKTLVFY KGRAPRGEKT KWVMHEYRLD AHFSLPHTYP SKEEWVICRI FHKSGEKRTP VLQVQGHSDA SSSPIKSSLS
201: PLLASSSHSQ LRDFQSPVLI HQQDQNGLSH PHLFPLEISN ARNHPSDLLF KPLQQNCTLK TKEQTIIPKV IKTEDATFYH QLLDDHNNMR CVNKLNQNPS
301: NFLNTFPLEV DAGLMAFSGA ANAQAREIST ASTPFNRVAL QQMLDSWPLT
101: GYWKATGKDK EVYSASSGTL LGMKKTLVFY KGRAPRGEKT KWVMHEYRLD AHFSLPHTYP SKEEWVICRI FHKSGEKRTP VLQVQGHSDA SSSPIKSSLS
201: PLLASSSHSQ LRDFQSPVLI HQQDQNGLSH PHLFPLEISN ARNHPSDLLF KPLQQNCTLK TKEQTIIPKV IKTEDATFYH QLLDDHNNMR CVNKLNQNPS
301: NFLNTFPLEV DAGLMAFSGA ANAQAREIST ASTPFNRVAL QQMLDSWPLT
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.