CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40061	Soybean	nucleus	83.51	89.26
KRH18465	Soybean	nucleus	52.06	56.42
KRG93561	Soybean	nucleus	51.03	54.7
KRH03497	Soybean	nucleus	43.56	48.29
KRH56898	Soybean	nucleus	43.56	48.29
PGSC0003DMT400083083	Potato	cytosol	40.46	46.73
Solyc03g115850.2.1	Tomato	nucleus	38.66	46.01
Solyc06g069710.2.1	Tomato	nucleus	39.95	45.72
GSMUA_Achr6P30570_001	Banana	cytosol, nucleus, plastid	38.14	45.54
PGSC0003DMT400050262	Potato	nucleus	38.66	45.18
KRH54575	Soybean	nucleus	40.72	44.26
KRH63309	Soybean	nucleus	40.21	43.7
VIT_14s0108g01070.t01	Wine grape	nucleus	46.65	42.99
GSMUA_Achr9P27530_001	Banana	nucleus	36.08	42.17
KRH27280	Soybean	nucleus	35.05	39.65
KRH22042	Soybean	nucleus	35.57	39.2
KRH48487	Soybean	nucleus	32.22	38.58
KRH60340	Soybean	nucleus	31.7	38.32
KRH41635	Soybean	nucleus	30.41	37.7
KRH13649	Soybean	nucleus	29.38	37.62
KRH39185	Soybean	nucleus	31.96	37.46
KRH43817	Soybean	nucleus	28.61	36.76
KRG94783	Soybean	nucleus	37.89	36.3
KRH06738	Soybean	nucleus	37.89	36.12
KRH26232	Soybean	nucleus	34.02	36.07
KRH55187	Soybean	nucleus	34.02	35.2
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	31.96	34.93
KRH61984	Soybean	nucleus	31.96	34.73
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	32.99	34.32
KRH60880	Soybean	nucleus	30.93	34.29
KRH08479	Soybean	nucleus	35.57	33.66
KRH70130	Soybean	nucleus	35.31	33.41
KRH67403	Soybean	cytosol, nucleus, plastid	24.74	32.43
KRG95684	Soybean	cytosol, nucleus, peroxisome	24.48	32.31
KRH51562	Soybean	nucleus	30.93	32.09
KRH32193	Soybean	cytosol, nucleus, plastid	24.23	31.76

Protein Annotations

EntrezGene:100790888	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:ACUP02011507	EnsemblPlantsGene:GLYMA_18G261300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:K7MUT8	EnsemblPlants:KRH01200
ProteinID:KRH01200	ProteinID:KRH01200.1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF50	SUPFAM:SSF101941	UniParc:UPI0002959669	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:+:54721097..54723680

Molecular Weight (calculated)

43932.7 Da

IEP (calculated)

6.067

GRAVY (calculated)

-0.668

Length

388 amino acids

Sequence
(BLAST)

001: MSLFVFPRGK HISASFFNGG FWCRMGSIEN ASKPRKENPK FELPAGFRFH PTDEELINQY LTKKVVDNCF CAIAIGEVDL NKCEPWDLPG LAKMGETEWY
101: FFCVRDRKFP TGIRTNRATD IGYWKATGKD KEIIMENALI GMKKTLVFYK GRAPKGEKTN WVMHEYRLEG KHNQPKPGKS EWVICRVFEK SRCGKKMHVP
201: KCGRFNNPFG EEPSSGASLL PPLMDSSPYN SETRTTTAGE LSQVTCFSDP NQTEDQNNTH DDIVDSMETP ILNFSPFSRP DDASTLAKAT LSSASNQSAQ
301: IAHQIGESQF PDYCYAPQEP SMLRMLMENH EPCAKQTQKE EFPEGRDFDG DISSMIYSSD MINRMFGNQE HSSSASAGPV DTDFLWNY

Best Arabidopsis Sequence Match ( AT3G29035.1 )
(BLAST)

001: MDYKVSRSGE IVEGEVEDSE KIDLPPGFRF HPTDEELITH YLRPKVVNSF FSAIAIGEVD LNKVEPWDLP WKAKLGEKEW YFFCVRDRKY PTGLRTNRAT
101: KAGYWKATGK DKEIFKGKSL VGMKKTLVFY KGRAPKGVKT NWVMHEYRLE GKFAIDNLSK TAKNECVISR VFHTRTDGTK EHMSVGLPPL MDSSPYLKSR
201: GQDSLAGTTL GGLLSHVTYF SDQTTDDKSL VADFKTTMFG SGSTNFLPNI GSLLDFDPLF LQNNSSVLKM LLDNEETQFK KNLHNSGSSE SELTASSWQG
301: HNSYGSTGPV NLDCVWKF

Arabidopsis Description

NAC59NAC domain-containing protein 59 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.