Factsheet for Solyc06g069710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083083	Potato	cytosol	95.58	96.43
Solyc03g115850.2.1	Tomato	nucleus	68.14	70.86
Solyc02g088180.2.1	Tomato	cytosol	51.62	54.86
VIT_14s0108g01070.t01	Wine grape	nucleus	62.83	50.59
GSMUA_Achr9P27530_001	Banana	nucleus	47.79	48.8
GSMUA_Achr6P30570_001	Banana	cytosol, nucleus, plastid	44.54	46.46
KRH40061	Soybean	nucleus	47.2	44.08
KRH18465	Soybean	nucleus	44.84	42.46
KRG93561	Soybean	nucleus	45.13	42.27
Solyc08g006020.2.1	Tomato	nucleus	37.46	42.05
Solyc07g062840.2.1	Tomato	nucleus	43.66	42.05
KRH01200	Soybean	mitochondrion, nucleus	45.72	39.95
Solyc12g036480.1.1	Tomato	nucleus	38.35	39.88
Solyc08g074300.2.1	Tomato	nucleus	39.53	39.3
Solyc07g066330.2.1	Tomato	nucleus	34.81	34.5
Solyc09g025310.2.1	Tomato	nucleus	27.43	34.44
Solyc06g008360.2.1	Tomato	nucleus	28.61	34.4
Solyc06g069100.1.1	Tomato	nucleus	39.53	26.96

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4C8E4	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF7	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc06g069710.2	EnsemblPlants:Solyc06g069710.2.1	UniParc:UPI0002766D23
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:43419475..43420728

Molecular Weight (calculated)

38051.3 Da

IEP (calculated)

8.049

GRAVY (calculated)

-0.404

Length

339 amino acids

Sequence
(BLAST)

001: MENYSGVVKD DDQMELPPGF RFHPTDEELI THYLSNKVVD TNFVAIAIGD VDLNKVEPWD LPWKAKMGEK EWYFFCVRDK KYPTGLRTNR ATAAGYWKAT
101: GKDREIFRGK SLVGMKKTLV FYKGRAPKGE KTNWVIHEFR LEGKLSLQNL PKTAKNEWVI CRVFQKSSGG KKIHISGLLK LNSNENEMGN SFLPPLTDSA
201: TATASKSSHV HCFSNFLTAQ NNCFPLLSNP MDSYPTTSLV PNTFSCNQIA PFTTTNNPAS FGVQDPSILL RTSLDSYGLN FKKEDIFNVP QETGVISTDM
301: NTDITSVVSN LEMKRRFLED QVPSAGMVGL QGLDCLWSC

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.