Factsheet for GSMUA_Achr6P30570_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P27530_001	Banana	nucleus	72.92	71.39
GSMUA_Achr9P00570_001	Banana	nucleus	26.77	51.79
GSMUA_Achr10P...	Banana	cytosol	35.69	50.88
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	36.0	50.65
GSMUA_Achr5P07600_001	Banana	cytosol	37.54	49.59
PGSC0003DMT400083083	Potato	cytosol	47.38	45.83
Solyc06g069710.2.1	Tomato	nucleus	46.46	44.54
GSMUA_Achr9P16920_001	Banana	cytosol	40.92	43.46
GSMUA_Achr3P18020_001	Banana	nucleus	38.77	43.0
Solyc03g115850.2.1	Tomato	nucleus	43.08	42.94
GSMUA_Achr7P18330_001	Banana	nucleus	40.0	42.21
PGSC0003DMT400050262	Potato	nucleus	43.08	42.17
KRH40061	Soybean	nucleus	46.77	41.87
GSMUA_Achr8P18420_001	Banana	nucleus	36.0	40.62
KRG93561	Soybean	nucleus	44.62	40.06
VIT_14s0108g01070.t01	Wine grape	nucleus	51.69	39.91
GSMUA_Achr6P08600_001	Banana	nucleus	42.15	39.48
GSMUA_Achr7P11500_001	Banana	nucleus	41.23	39.41
GSMUA_Achr10P...	Banana	nucleus	40.0	39.16
KRH18465	Soybean	nucleus	42.77	38.83
GSMUA_Achr10P...	Banana	cytosol	42.15	38.59
GSMUA_Achr3P09520_001	Banana	cytosol	37.54	38.36
GSMUA_Achr11P...	Banana	nucleus	30.77	38.17
KRH01200	Soybean	mitochondrion, nucleus	45.54	38.14
GSMUA_Achr5P18670_001	Banana	nucleus	32.0	38.1
GSMUA_Achr9P10210_001	Banana	nucleus	28.0	37.76
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	37.54	37.31
GSMUA_Achr6P32290_001	Banana	nucleus	39.69	37.28
GSMUA_Achr10P...	Banana	nucleus	37.23	36.89
GSMUA_Achr11P...	Banana	nucleus	31.38	36.69
GSMUA_Achr8P18980_001	Banana	nucleus	30.46	36.26
GSMUA_Achr9P20090_001	Banana	cytosol	35.08	35.96
GSMUA_Achr11P...	Banana	nucleus	30.77	35.84
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	30.46	35.74
GSMUA_Achr3P23360_001	Banana	nucleus	30.77	35.71
GSMUA_Achr6P30050_001	Banana	nucleus	31.08	35.44
GSMUA_Achr6P36550_001	Banana	nucleus	30.15	35.25
GSMUA_AchrUn_...	Banana	nucleus	27.69	35.02
GSMUA_Achr8P24680_001	Banana	cytosol	34.15	35.02
GSMUA_Achr8P33310_001	Banana	nucleus	29.85	34.28
GSMUA_Achr6P31350_001	Banana	nucleus	31.38	34.23
GSMUA_Achr5P00500_001	Banana	nucleus	28.62	33.94
GSMUA_AchrUn_...	Banana	nucleus	30.15	33.79
GSMUA_Achr5P26640_001	Banana	nucleus	31.08	33.78
GSMUA_Achr8P07120_001	Banana	nucleus	31.08	33.55
GSMUA_Achr9P26140_001	Banana	cytosol	31.69	32.7
GSMUA_Achr1P10860_001	Banana	nucleus	28.62	31.96
GSMUA_Achr8P21470_001	Banana	nucleus	43.38	27.33

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G30570_001
EnsemblPlants:GSMUA_Achr6P30570_001	EnsemblPlants:GSMUA_Achr6T30570_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TBK2	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF7	SUPFAM:SSF101941
UniParc:UPI0002967D52	SEG:seg	:	:	:	:

Description

no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G30570_001]

Coordinates

chr6:+:30528929..30530130

Molecular Weight (calculated)

36296.3 Da

IEP (calculated)

8.307

GRAVY (calculated)

-0.382

Length

325 amino acids

Sequence
(BLAST)

001: MEDGVAVLSR GKNQVMELPP GFRFQPTDEE LITHYLAKKV TDASFHAVAI GEVDLNKYEP WDLPCKAKTG EKEWYFFCVR DRKYPTGLRT NRATKAGYWK
101: ATGKDNAIYR EKILVGMKKT LVFYTGRAPK GEKSNWVMHE YRLEGKCYVH NLPPKMIAMN EWVVCRIFHK ISSIKKPVKA DVSLVPPANE NDDISKNEAF
201: PTFDSPNVTC FSNTTGINDE LLDECFRFPS AAARQGSPTP RFLSMMCLSS SLCSSGMQSP PDVSSVKKQM SGTELLSASW DSGFTSVISS IVSSDESGKR
301: PFAAQEIPSA SAGHILLADR CLWNY

Best Arabidopsis Sequence Match ( AT5G07680.2 )
(BLAST)

001: MDLPPGFRFH PTDEELITHY LHKKVLDLGF SAKAIGEVDL NKAEPWELPY KAKIGEKEWY FFCVRDRKYP TGLRTNRATQ AGYWKATGKD KEIFRGKSLV
101: GMKKTLVFYR GRAPKGQKTN WVMHEYRLDG KLSAHNLPKT AKNEWVICRV FHKTAGGKKI PISTLIRIGS YGTGSSLPPL TDSSPYNDKT KTEPVYVPCF
201: SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI SESSNPVLTQ EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP
301: SPSSGPVDLE PFWNY

Arabidopsis Description

NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.