Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH75226 | Soybean | cytosol | 94.08 | 94.62 |
VIT_01s0010g00990.t01 | Wine grape | cytosol | 72.96 | 71.94 |
Solyc05g010420.1.1 | Tomato | cytosol | 72.39 | 71.39 |
PGSC0003DMT400019451 | Potato | cytosol | 72.11 | 71.11 |
AT3G25570.2 | Thale cress | cytosol | 67.89 | 69.05 |
PGSC0003DMT400041339 | Potato | cytosol | 68.73 | 67.22 |
Solyc01g010050.2.1 | Tomato | cytosol | 67.61 | 65.93 |
KRH01466 | Soybean | cytosol, golgi, nucleus | 65.92 | 65.18 |
KRH45175 | Soybean | cytosol | 65.63 | 64.9 |
KRH02991 | Soybean | cytosol | 46.76 | 46.37 |
GSMUA_Achr9P18460_001 | Banana | cytosol | 55.21 | 46.12 |
KRH50975 | Soybean | cytosol | 38.03 | 39.02 |
KRH11332 | Soybean | cytosol | 38.31 | 38.86 |
KRH20949 | Soybean | cytosol | 38.31 | 38.86 |
KRH02157 | Soybean | cytosol | 38.31 | 38.53 |
Protein Annotations
KEGG:00270+4.1.1.50 | KEGG:00330+4.1.1.50 | Gene3D:3.30.360.50 | Gene3D:3.60.90.10 | EntrezGene:547981 | MapMan:8.2.1 |
EMBL:ACUP02000855 | EMBL:AF488307 | EnsemblPlantsGene:GLYMA_02G128000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004014 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
GO:GO:0006557 | GO:GO:0006596 | GO:GO:0006597 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008295 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016831 | EnsemblPlants:KRH71078 | ProteinID:KRH71078 |
ProteinID:KRH71078.1 | PFAM:PF01536 | PIRSF:PIRSF001355 | ScanProsite:PS01336 | PANTHER:PTHR11570 | PANTHER:PTHR11570:SF15 |
MetaCyc:PWY-6834 | UniProt:Q8S3F8 | InterPro:S-AdoMet_deCO2ase_CS | InterPro:S-AdoMet_deCO2ase_core | InterPro:S-AdoMet_decarboxylase | SUPFAM:SSF56276 |
TIGRFAMs:TIGR00535 | UniParc:UPI00000A79E3 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:13048160..13051248
Molecular Weight (calculated)
38989.2 Da
IEP (calculated)
4.577
GRAVY (calculated)
-0.092
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAVSAIGF EGFEKRLEIS FFQPGLFADP EGRGLRALTK SQLGEILTPA ACTIVSSLKN DNVDSYVLSE SSLFVYAYKI IIKTCGTTKL LLAIPPILKF
101: AEMLSLNVKS VNYTRGSFIF PSAQPYPHRN FSEEVAILDG YFGKLGAGSN AYILGGQDKA QNWHVYSASA DSVTQCDNVY TLEMCMTGLD REKAQVFYKE
201: QSASAAMMTV NSGIRKILPD SEICDFDFEP CGYSMNSVEG AAVSTIHVTP EDGFSYASFE TVGYDFKAVN LNEMVQRVLA CFLPTEFSVA VHVDGASKSF
301: EQTCFLDVKG YCREERSHEG LGMGGSVVYQ KFGKTSDCGS PRSTLKCWNE EDEEE
101: AEMLSLNVKS VNYTRGSFIF PSAQPYPHRN FSEEVAILDG YFGKLGAGSN AYILGGQDKA QNWHVYSASA DSVTQCDNVY TLEMCMTGLD REKAQVFYKE
201: QSASAAMMTV NSGIRKILPD SEICDFDFEP CGYSMNSVEG AAVSTIHVTP EDGFSYASFE TVGYDFKAVN LNEMVQRVLA CFLPTEFSVA VHVDGASKSF
301: EQTCFLDVKG YCREERSHEG LGMGGSVVYQ KFGKTSDCGS PRSTLKCWNE EDEEE
001: MAVSATGFEG FEKRLEISFF ETTDFLDPQG KSLRSLTKSQ LDEILTPAEC TIVSSLTNSF VDSYVLSESS LFVYPYKIII KTCGTTKLLL SIPHILRLAD
101: SLCLTVKSVR YTRGSFIFPG AQSYPHRSFS EEVALLDDYF GKLNAGSKAF VMGGSDNNPQ RWHVYSASST EESAVCDKPV YTLEMCMTGL DNIKASVFFK
201: TNSVSASEMT ISSGIRNILP GSEICDFNFE PCGYSMNSIE GDAVSTIHVT PEDGFSYASF ETVGYDLKAL NFKELVDRVL VCFGPEEFSV AVHANLGTEV
301: LASDCVADVN GYFSQERELE ELGLGGSVLY QRFVKTVECC SPKSTLGFC
101: SLCLTVKSVR YTRGSFIFPG AQSYPHRSFS EEVALLDDYF GKLNAGSKAF VMGGSDNNPQ RWHVYSASST EESAVCDKPV YTLEMCMTGL DNIKASVFFK
201: TNSVSASEMT ISSGIRNILP GSEICDFNFE PCGYSMNSIE GDAVSTIHVT PEDGFSYASF ETVGYDLKAL NFKELVDRVL VCFGPEEFSV AVHANLGTEV
301: LASDCVADVN GYFSQERELE ELGLGGSVLY QRFVKTVECC SPKSTLGFC
Arabidopsis Description
SAMDC3S-adenosylmethionine decarboxylase proenzyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSU6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.