Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0564600-01 | Rice | plasma membrane | 76.09 | 80.16 |
| TraesCS5A01G087300.2 | Wheat | cytosol | 76.25 | 79.57 |
| TraesCS5B01G093200.2 | Wheat | cytosol | 76.09 | 79.33 |
| TraesCS5D01G098900.2 | Wheat | cytosol | 73.79 | 76.88 |
| HORVU5Hr1G022740.2 | Barley | nucleus | 74.77 | 76.59 |
| Zm00001d003610_P001 | Maize | cytosol | 6.63 | 73.64 |
| Solyc01g057850.2.1 | Tomato | cytosol | 34.4 | 71.43 |
| GSMUA_Achr3P24450_001 | Banana | cytosol | 59.05 | 70.96 |
| PGSC0003DMT400003104 | Potato | cytosol | 31.2 | 65.46 |
| CDX83176 | Canola | cytosol | 56.67 | 64.98 |
| AT5G49930.1 | Thale cress | cytosol | 57.33 | 64.81 |
| CDY21443 | Canola | cytosol | 56.76 | 64.77 |
| VIT_05s0077g00460.t01 | Wine grape | cytosol | 59.71 | 64.51 |
| Bra000600.1-P | Field mustard | cytosol | 56.84 | 63.55 |
| KRH11885 | Soybean | cytosol | 59.46 | 63.52 |
| KRH36919 | Soybean | nucleus | 58.56 | 62.55 |
| VIT_05s0020g00170.t01 | Wine grape | nucleus | 39.89 | 56.5 |
Protein Annotations
| MapMan:17.3.3.2.3 | Gene3D:2.30.310.10 | Gene3D:4.10.60.10 | UniProt:A0A1B6PDF8 | ncoils:Coil | InterPro:DUF3441 |
| InterPro:DUF814 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR001878 |
| EnsemblPlants:KXG23713 | ProteinID:KXG23713 | ProteinID:KXG23713.1 | PFAM:PF00098 | PFAM:PF05670 | PFAM:PF05833 |
| PFAM:PF11923 | PFscan:PS50158 | PANTHER:PTHR15239 | PANTHER:PTHR15239:SF6 | SMART:SM00343 | EnsemblPlantsGene:SORBI_3008G131800 |
| SUPFAM:SSF57756 | UniParc:UPI00081AD358 | InterPro:Znf_CCHC | InterPro:Znf_CCHC_sf | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr8:-:55801939..55815614
Molecular Weight (calculated)
135744.0 Da
IEP (calculated)
6.779
GRAVY (calculated)
-0.699
Length
1221 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVKARMTTTD VAAEVKCLRR LIGMRLANVY DITPKTYLFK LMNSSGITES GESERVLLLM ESGVRFHTTQ YVRDKSTTPS GFTLKLRKHI RNKRLEDVRM
0101: LGYDRIILFQ FGLGSNAHFI ILELYAQGNI LLTDSEYTVM TLLRSHRDDN KGLAIMSRHR YPVEVCRVFV RTDFAKLKDM LTMPDKADDK EEITSGSTDA
0201: QEPSQSTNDE VLITEISEKS LSRKEKKAAA KAKQSGSNAK ANNGVQSNKA TLKTILGEAL AYGPALAEHI ILDAGLVPST KVGKDPESTV DDSTVQALME
0301: SITRFEDWLV DIISGQRIPE GYILMQNKLT AKKNLTPSEE ASTNHKIYDE YCPILLNQFK SREYNEFATF DAALDEFYSK IESQKVNQQQ KAKEESAAQR
0401: LNKIKLDQEN RVHTLRKEVD HCVKMAELIE YNLEDVDAAI LAVRVSLANE MSWEALTRMI KEERKAGNPV AGLIDKLNFE RNCITLLLSN NLDDMDEDEK
0501: TAPVEKVEVD IALSAHANAR RWYEMKKKQE SKQEKTITAH EKAFKAAEKK TRLQLAQEKT VAAITHMRKV HWFEKFNWFI SSENYLIISG RDAQQNELIV
0601: KRYMSKGDLY VHAELHGASS TIIKNHKPDT PIPPLTLNQA GCFTVCHSKA WDSKIVTSAW WVYPHQVSKT APTGEYLTVG SFMIRGKKNF LPPHPLVMGF
0701: GILFRLDESS LASHLNERRV RGEDEALQEM EAESRKKQSN PESDEEIGSD EGANKETHED ESSGQTTNIQ QNNDLELPDL SSNIGTANSP ELPEIQAEES
0801: LDNGSSISKE ETIQAEDLLD NGSSISKEET IEASVSSQLD DLLDKTLRLG PAKVSGKSSL LTSVPSSLAE DDDDLELKRP TIRDKPYISK AERRKLKKGQ
0901: VNGETATDSQ NGEAVETPGT SKQEKGKADT KAADSKASQP GTSQQEKGKA NTKATGSKLS QPGYSQQEKG KGSTQAANAK VSRGQKGKLK KIKEKYAEQD
1001: EEEREIRMAL LASSGKALRK DKPSQDEETS VKESKPSAGE DDSSKICYKC KKAGHLSRDC PESTSEVDRN DGSISKSRDV MGTNTSPAGG NSPMDEDDVQ
1101: EIGDEEKEKL IDLDYLTGNP LPSDILLYAV PVCAPYNALQ TYKYRVKITP GTAKKGKAAK TAMSLFLHIP DATNREKELM KACTDPELVA AIVGNAKITA
1201: PGLTQLKQKQ KQKGKKSAKQ K
0101: LGYDRIILFQ FGLGSNAHFI ILELYAQGNI LLTDSEYTVM TLLRSHRDDN KGLAIMSRHR YPVEVCRVFV RTDFAKLKDM LTMPDKADDK EEITSGSTDA
0201: QEPSQSTNDE VLITEISEKS LSRKEKKAAA KAKQSGSNAK ANNGVQSNKA TLKTILGEAL AYGPALAEHI ILDAGLVPST KVGKDPESTV DDSTVQALME
0301: SITRFEDWLV DIISGQRIPE GYILMQNKLT AKKNLTPSEE ASTNHKIYDE YCPILLNQFK SREYNEFATF DAALDEFYSK IESQKVNQQQ KAKEESAAQR
0401: LNKIKLDQEN RVHTLRKEVD HCVKMAELIE YNLEDVDAAI LAVRVSLANE MSWEALTRMI KEERKAGNPV AGLIDKLNFE RNCITLLLSN NLDDMDEDEK
0501: TAPVEKVEVD IALSAHANAR RWYEMKKKQE SKQEKTITAH EKAFKAAEKK TRLQLAQEKT VAAITHMRKV HWFEKFNWFI SSENYLIISG RDAQQNELIV
0601: KRYMSKGDLY VHAELHGASS TIIKNHKPDT PIPPLTLNQA GCFTVCHSKA WDSKIVTSAW WVYPHQVSKT APTGEYLTVG SFMIRGKKNF LPPHPLVMGF
0701: GILFRLDESS LASHLNERRV RGEDEALQEM EAESRKKQSN PESDEEIGSD EGANKETHED ESSGQTTNIQ QNNDLELPDL SSNIGTANSP ELPEIQAEES
0801: LDNGSSISKE ETIQAEDLLD NGSSISKEET IEASVSSQLD DLLDKTLRLG PAKVSGKSSL LTSVPSSLAE DDDDLELKRP TIRDKPYISK AERRKLKKGQ
0901: VNGETATDSQ NGEAVETPGT SKQEKGKADT KAADSKASQP GTSQQEKGKA NTKATGSKLS QPGYSQQEKG KGSTQAANAK VSRGQKGKLK KIKEKYAEQD
1001: EEEREIRMAL LASSGKALRK DKPSQDEETS VKESKPSAGE DDSSKICYKC KKAGHLSRDC PESTSEVDRN DGSISKSRDV MGTNTSPAGG NSPMDEDDVQ
1101: EIGDEEKEKL IDLDYLTGNP LPSDILLYAV PVCAPYNALQ TYKYRVKITP GTAKKGKAAK TAMSLFLHIP DATNREKELM KACTDPELVA AIVGNAKITA
1201: PGLTQLKQKQ KQKGKKSAKQ K
0001: MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
Arabidopsis Description
emb1441Gb [Source:UniProtKB/TrEMBL;Acc:Q9LTX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.