CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36919	Soybean	nucleus	95.19	95.19
Solyc01g057850.2.1	Tomato	cytosol	40.16	78.06
VIT_05s0077g00460.t01	Wine grape	cytosol	72.88	73.72
CDY21443	Canola	cytosol	67.63	72.24
PGSC0003DMT400003104	Potato	cytosol	36.57	71.82
CDX83176	Canola	cytosol	66.84	71.74
AT5G49930.1	Thale cress	cytosol	67.72	71.67
GSMUA_Achr3P24450_001	Banana	cytosol	63.43	71.36
Bra000600.1-P	Field mustard	cytosol	67.63	70.79
Zm00001d003610_P001	Maize	cytosol	6.21	64.55
VIT_05s0020g00170.t01	Wine grape	nucleus	48.21	63.92
Os12t0564600-01	Rice	plasma membrane	63.43	62.55
TraesCS5D01G098900.2	Wheat	cytosol	63.52	61.95
TraesCS5A01G087300.2	Wheat	cytosol	61.94	60.51
TraesCS5B01G093200.2	Wheat	cytosol	61.77	60.29
Zm00001d041582_P005	Maize	cytosol	62.99	59.5
KXG23713	Sorghum	cytosol	63.52	59.46
HORVU5Hr1G022740.2	Barley	nucleus	61.24	58.72

Protein Annotations

EntrezGene:100807437	MapMan:17.3.3.2.3	Gene3D:2.30.310.10	Gene3D:4.10.60.10	EMBL:ACUP02009243	ncoils:Coil
InterPro:DUF3441	InterPro:DUF814	EnsemblPlantsGene:GLYMA_15G136900	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0008270	UniProt:I1MGB1	InterPro:IPR001878	EnsemblPlants:KRH11885	ProteinID:KRH11885	ProteinID:KRH11885.1
PFAM:PF00098	PFAM:PF05670	PFAM:PF05833	PFAM:PF11923	PFscan:PS50158	PANTHER:PTHR15239
PANTHER:PTHR15239:SF6	SMART:SM00343	SUPFAM:SSF57756	UniParc:UPI0002949D27	InterPro:Znf_CCHC	InterPro:Znf_CCHC_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:11078315..11087150

Molecular Weight (calculated)

127865.0 Da

IEP (calculated)

7.062

GRAVY (calculated)

-0.663

Length

1143 amino acids

Sequence
(BLAST)

0001: MVKVRMNTAD VAAEVKCLRR LIGMRCSNVY DLSPKTYVFK LMNSSGVSES GESEKVLLLM ESGVRLHTTL YMRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIILFQ FGLGENANYV ILELYAQGNI LLTDSTFTVM TLLRSHRDDD KGLAIMSRHR YPVESCRVFE RTTIEKLRTS LVSSKEDDAD EAVKANGNGS
0201: NASNVAKEKQ ETRKGGKSSA TLKIVLGEAL GYGPALSEHI ILDAGLIPST KVPKDRTWDD ATVQALVQAV VKFEDWMQDV ISGEIVPEGY ILMQNKNLGK
0301: DSSISQPGSV SQMYDEFCPI LLNQFKSRDY TKFETFDAAL DEFYSKIESQ RAEQQQKSKE NSAAQKLNKI RQDQENRVHV LRKEADHCVK MAELIEYNLE
0401: DVDAAILAVR VALAKGMNWD DLARMVKEEK KAGNPVAGLI DKLHLERNCM NLLLSNNLDE MDDDEKTLPV DKVEVDLALS AHANARRWYE QKKKQESKQE
0501: KTVTAHEKAF KAAERKTRLQ LNQEKTVASI SHMRKVHWFE KFNWFISSEN YLVISGRDAQ QNELIVKRYM SKGDLYVHAD LHGASSTVIK NHKPAQPVPP
0601: LTLNQAGCFT VCHSQAWDSK IVTSAWWVYP HQVSKTAPTG EYLTVGSFMI RGKKNFLPPH PLIMGFGLLF RLDESSLGSH LNERRVRGEE EAADDYEETG
0701: PLEGKSDSEF EKDVTDIKSA TDSERNDNLS ADSHKPLPED FPADASQTSL ATINAETAIS QDFPAKETST LNVVDREILS DVSGNGLASV TPQLEELLDQ
0801: VLELGPIAKS NKKYGIEKSQ IDLDTEQYLE QSKTAVRDKP YISKAERRKL KKEQKHGEED LNVEHGKYES KLKDISANLQ AKEDQNLKKG GGQKISRGQK
0901: GKLKKIKEKY ADQDEEERSI RMALLASSGK SIKKEETSSE NDTLDQGKKP GSGPSDAPKV PSDAPKICYK CKKAGHLSRD CKEQPDGLLH RNAIGEAEEN
1001: PKSTAIDTSQ ADRVAMEEDD INEIGEEEKE KLNDVDYLTG NPLPNDILLY AVPVCGPYSA VQSYKYRVKI IPGPAKKGKA AKTAMNLFSH MSEATTREKE
1101: LMKACTDPEL VAAIVGNVKI SAAGLTQLKQ KQKKGKKSSK QES

Best Arabidopsis Sequence Match ( AT5G49930.1 )
(BLAST)

0001: MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS

Arabidopsis Description

emb1441Gb [Source:UniProtKB/TrEMBL;Acc:Q9LTX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.