Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g057850.2.1 | Tomato | cytosol | 41.83 | 72.28 |
| Zm00001d003610_P001 | Maize | cytosol | 7.28 | 67.27 |
| VIT_05s0077g00460.t01 | Wine grape | cytosol | 74.7 | 67.17 |
| PGSC0003DMT400003104 | Potato | cytosol | 37.7 | 65.81 |
| CDY21443 | Canola | cytosol | 68.5 | 65.05 |
| CDX83176 | Canola | cytosol | 68.11 | 64.98 |
| AT5G49930.1 | Thale cress | cytosol | 68.41 | 64.35 |
| Bra000600.1-P | Field mustard | cytosol | 68.5 | 63.74 |
| KRH36919 | Soybean | nucleus | 71.46 | 63.52 |
| KRH11885 | Soybean | cytosol | 71.36 | 63.43 |
| TraesCS5D01G098900.2 | Wheat | cytosol | 71.46 | 61.95 |
| Os12t0564600-01 | Rice | plasma membrane | 70.18 | 61.52 |
| TraesCS5A01G087300.2 | Wheat | cytosol | 69.69 | 60.51 |
| TraesCS5B01G093200.2 | Wheat | cytosol | 69.49 | 60.29 |
| Zm00001d041582_P005 | Maize | cytosol | 70.77 | 59.42 |
| KXG23713 | Sorghum | cytosol | 70.96 | 59.05 |
| HORVU5Hr1G022740.2 | Barley | nucleus | 68.7 | 58.56 |
| VIT_05s0020g00170.t01 | Wine grape | nucleus | 48.43 | 57.08 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P24450_001 | EnsemblPlants:GSMUA_Achr3T24450_001 | EnsemblPlantsGene:GSMUA_Achr3G24450_001 | Gene3D:2.30.310.10 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:DUF3441 | InterPro:DUF814 | ncoils:Coil | PANTHER:PTHR15239 |
| PANTHER:PTHR15239:SF6 | PFAM:PF05670 | PFAM:PF05833 | PFAM:PF11923 | SEG:seg | UniParc:UPI000294E2F1 |
| UniProt:M0SHG1 | MapMan:17.3.3.2.3 | : | : | : | : |
Description
Putative Serologically defined colon cancer antigen 1 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr3G24450_001]
Coordinates
chr3:+:24971111..24982993
Molecular Weight (calculated)
114303.0 Da
IEP (calculated)
8.255
GRAVY (calculated)
-0.556
Length
1016 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVKVRMNTAD VAAELKCLRK LIGMRCANVY DISPKTYLFK LMNSSGITES GESEKVLLLM ESGVRLHTTQ YVRDKNTTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIVLFQ FGLGSNAHYV ILELYAQGNI LLTDSDFTVM TLLRSHRDDD KGLVIMSRHR YPVDDKSNDQ SGCKSKNLPA SNKEASSKNQ SNKTTLKTVL
0201: GEALSYGPAL SEHIILDAGL LPNMKVGKDI DGKINEDNFE VLAQAVTRFE DWLADVIYGP TVPEGYILMQ SKTSGKKDLV VPQESAMDKV YDEFCPILLN
0301: QFKSRECMKF ETFDGALDEF YSKIESQRGE QQRKAKEESA MQKLDKIRLD QENRVHALKK EVDYSVKMAE LIEYNLEDVD AAIIAVRVAL ANGMNWEDLA
0401: RMVKEERKSG NPVAGLIDKL RLERNCITLL LSNNLDEMDD DEKTAPVEKV EVDLALSAHA NACRWYELKK RQENKQDKTI KAHEKAFKAA EKKTRHQLAQ
0501: EKTVAAISHM RKVHWFEKFN WFISSENYLI ISGRDAQQNE MIVKRYMSKG DLYVHADLHG ASSTVIKNHK PDNPIPPLTL NQAGCFTVCH SQAWESKIVT
0601: SAWWVYPHQV SKTAPTGEYL TVGSFMIRGK KNFLPPHPLV MGFGILFRLD ESSLASHINE RRVRGEDEGL HEMEESENYL NNLNAGSLSG INDSSSSQLD
0701: LLLDKALGLG PSPAKLSSKS SGLDSYESTP VEAHINDDKK AAGREKPYIS KAERRKLKKG QKSTADIVDV SEVKENNVDL QLDSSEKLRP ANLKFARGQR
0801: GKHKKIKEKY AEQDEEERRI RMALLASVGK APQKEKESDN HVAVAGKLTR SSTDEHDSSK ICYKCKKAGH LSKDSNIEMD VAAMEEDGIH DIGEEEREKL
0901: NDLDYLTGNP LPGDILLYAV PVCGPYSALQ TYKYRVKITP GTAKKGKAAK TAMNLFNHMP EVTNREKELM KACTDPELVA AIVSNVKITA PGLTQLKQKQ
1001: KKGKCFVVPC LVLLEY
0101: LGYDRIVLFQ FGLGSNAHYV ILELYAQGNI LLTDSDFTVM TLLRSHRDDD KGLVIMSRHR YPVDDKSNDQ SGCKSKNLPA SNKEASSKNQ SNKTTLKTVL
0201: GEALSYGPAL SEHIILDAGL LPNMKVGKDI DGKINEDNFE VLAQAVTRFE DWLADVIYGP TVPEGYILMQ SKTSGKKDLV VPQESAMDKV YDEFCPILLN
0301: QFKSRECMKF ETFDGALDEF YSKIESQRGE QQRKAKEESA MQKLDKIRLD QENRVHALKK EVDYSVKMAE LIEYNLEDVD AAIIAVRVAL ANGMNWEDLA
0401: RMVKEERKSG NPVAGLIDKL RLERNCITLL LSNNLDEMDD DEKTAPVEKV EVDLALSAHA NACRWYELKK RQENKQDKTI KAHEKAFKAA EKKTRHQLAQ
0501: EKTVAAISHM RKVHWFEKFN WFISSENYLI ISGRDAQQNE MIVKRYMSKG DLYVHADLHG ASSTVIKNHK PDNPIPPLTL NQAGCFTVCH SQAWESKIVT
0601: SAWWVYPHQV SKTAPTGEYL TVGSFMIRGK KNFLPPHPLV MGFGILFRLD ESSLASHINE RRVRGEDEGL HEMEESENYL NNLNAGSLSG INDSSSSQLD
0701: LLLDKALGLG PSPAKLSSKS SGLDSYESTP VEAHINDDKK AAGREKPYIS KAERRKLKKG QKSTADIVDV SEVKENNVDL QLDSSEKLRP ANLKFARGQR
0801: GKHKKIKEKY AEQDEEERRI RMALLASVGK APQKEKESDN HVAVAGKLTR SSTDEHDSSK ICYKCKKAGH LSKDSNIEMD VAAMEEDGIH DIGEEEREKL
0901: NDLDYLTGNP LPGDILLYAV PVCGPYSALQ TYKYRVKITP GTAKKGKAAK TAMNLFNHMP EVTNREKELM KACTDPELVA AIVSNVKITA PGLTQLKQKQ
1001: KKGKCFVVPC LVLLEY
0001: MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
Arabidopsis Description
emb1441Gb [Source:UniProtKB/TrEMBL;Acc:Q9LTX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.