Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G087300.2 | Wheat | cytosol | 99.23 | 99.32 |
| TraesCS5D01G098900.2 | Wheat | cytosol | 96.5 | 96.42 |
| HORVU5Hr1G022740.2 | Barley | nucleus | 96.41 | 94.71 |
| Os12t0564600-01 | Rice | plasma membrane | 82.07 | 82.92 |
| KXG23713 | Sorghum | cytosol | 79.33 | 76.09 |
| Zm00001d041582_P005 | Maize | cytosol | 78.57 | 76.03 |
| Zm00001d003610_P001 | Maize | cytosol | 6.66 | 70.91 |
| Solyc01g057850.2.1 | Tomato | cytosol | 35.44 | 70.58 |
| GSMUA_Achr3P24450_001 | Banana | cytosol | 60.29 | 69.49 |
| PGSC0003DMT400003104 | Potato | cytosol | 32.37 | 65.12 |
| CDY21443 | Canola | cytosol | 58.75 | 64.3 |
| CDX83176 | Canola | cytosol | 58.41 | 64.23 |
| AT5G49930.1 | Thale cress | cytosol | 59.01 | 63.98 |
| Bra000600.1-P | Field mustard | cytosol | 58.92 | 63.19 |
| VIT_05s0077g00460.t01 | Wine grape | cytosol | 60.12 | 62.3 |
| KRH11885 | Soybean | cytosol | 60.29 | 61.77 |
| KRH36919 | Soybean | nucleus | 59.78 | 61.24 |
| VIT_05s0020g00170.t01 | Wine grape | nucleus | 40.65 | 55.22 |
Protein Annotations
| MapMan:17.3.3.2.3 | Gene3D:2.30.310.10 | Gene3D:4.10.60.10 | ncoils:Coil | InterPro:DUF3441 | InterPro:DUF814 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR001878 | PFAM:PF00098 |
| PFAM:PF05670 | PFAM:PF05833 | PFAM:PF11923 | PFscan:PS50158 | PANTHER:PTHR15239 | PANTHER:PTHR15239:SF6 |
| SMART:SM00343 | SUPFAM:SSF57756 | EnsemblPlantsGene:TraesCS5B01G093200 | EnsemblPlants:TraesCS5B01G093200.2 | InterPro:Znf_CCHC | InterPro:Znf_CCHC_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:122424282..122431764
Molecular Weight (calculated)
130364.0 Da
IEP (calculated)
7.285
GRAVY (calculated)
-0.706
Length
1171 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVKARMTTAD VAAEVKCLRR LIGMRLSNVY DITPKTYLFK LMNSSGITES GESEKVLLLM ESGVRLHTTQ YVRDKSTTPS GFTLKLRKHV RGKRLEDVRM
0101: LGYDRMILFQ FGLGSNAHFI ILELYAQGNI ILTDSEYTVM TLLRSHRDDN KGLAIMSRHR YPVEACRTFE RTDFTKLKDT LKLSNTVDDK ESSQVTPSSA
0201: DAQQPSECAN DGVPATDKLE EPANRTGKKS AAKFKQSGSD AKASNGTQSN KATLKTLLGE ALPYGPALAE HIILDAGLLP STKVGKDPES SLDDHTIQSL
0301: VESVARFEDW LVDIISGQRI PEGYILMQNK MTAKKNVTPS EGSSTNQKVY DEYCPILLTQ CKSREYDKFE TFDDALDEFY SKIESQRVNQ QHKAKEDSAV
0401: HRLNKIKLDQ ENRVHTLRKE ADHCITMAEL IEYNLEDVDA AIKAVRVSLA NGMSWEALAR MIKEEKKAGN PVAGLIDKLS FEKNCITLLL SNNLDDMDEE
0501: EKTAPVEKVE VDLSLSAHAN ARRWYEMKKK QETKQEKTIT AHEKAFKAAE KKTRLQLAQE KTVAAITHMR KVHWFEKFNW FISSENYLIV SGRDAQQNEL
0601: VVKRYMSKGD LYVHAELHGA SSTIIKNHKP DSPIPPLTLN QAGCFTVCHS KAWDSKIVTS AWWVYPHQVS KTAPTGEYLT VGSFMIRGKK NFLPPHPLVM
0701: GFGILFRLDE SCLASHLNER RIRGEDEALP ETEADPRLNE RRIRGEDETL PETEAEPQKQ QSNPESDDKL ATDNEMSKGT HDNESSRDHT GVHQNDDTNH
0801: SNLPNVDTAD KSQQVAEAKT VENSGTDASV SSRLEDLLDK SLGLGPAKGS GKSSLLVSSL SSLGEDTDDL DVKKSMVREK PYVSKAERRK LKKGENACES
0901: TSDPQKVVKK PDNPQQEKGK DNTKAANPKT SRGQKGKLKK IKEKYAEQDE EEREIRMALL ASSGKASQKD NPSQDGEDTT AKQSKPSTGE DDSLKVCYKC
1001: KKSGHLSRDC PDSTSAVDLT DVNVGRSRDG MDRSATPVDG SIVMDEDDIN ELGDEEKEKL IDLDYLTGIP VASDILLYAV PVCAPYNALQ TYKYRVKITP
1101: GTAKKGKAAK TAMSLFMHIP DATNREKELM KACTDPELVA AIVGNAKITA PGLTQLKQKQ KQKGKKAAKS N
0101: LGYDRMILFQ FGLGSNAHFI ILELYAQGNI ILTDSEYTVM TLLRSHRDDN KGLAIMSRHR YPVEACRTFE RTDFTKLKDT LKLSNTVDDK ESSQVTPSSA
0201: DAQQPSECAN DGVPATDKLE EPANRTGKKS AAKFKQSGSD AKASNGTQSN KATLKTLLGE ALPYGPALAE HIILDAGLLP STKVGKDPES SLDDHTIQSL
0301: VESVARFEDW LVDIISGQRI PEGYILMQNK MTAKKNVTPS EGSSTNQKVY DEYCPILLTQ CKSREYDKFE TFDDALDEFY SKIESQRVNQ QHKAKEDSAV
0401: HRLNKIKLDQ ENRVHTLRKE ADHCITMAEL IEYNLEDVDA AIKAVRVSLA NGMSWEALAR MIKEEKKAGN PVAGLIDKLS FEKNCITLLL SNNLDDMDEE
0501: EKTAPVEKVE VDLSLSAHAN ARRWYEMKKK QETKQEKTIT AHEKAFKAAE KKTRLQLAQE KTVAAITHMR KVHWFEKFNW FISSENYLIV SGRDAQQNEL
0601: VVKRYMSKGD LYVHAELHGA SSTIIKNHKP DSPIPPLTLN QAGCFTVCHS KAWDSKIVTS AWWVYPHQVS KTAPTGEYLT VGSFMIRGKK NFLPPHPLVM
0701: GFGILFRLDE SCLASHLNER RIRGEDEALP ETEADPRLNE RRIRGEDETL PETEAEPQKQ QSNPESDDKL ATDNEMSKGT HDNESSRDHT GVHQNDDTNH
0801: SNLPNVDTAD KSQQVAEAKT VENSGTDASV SSRLEDLLDK SLGLGPAKGS GKSSLLVSSL SSLGEDTDDL DVKKSMVREK PYVSKAERRK LKKGENACES
0901: TSDPQKVVKK PDNPQQEKGK DNTKAANPKT SRGQKGKLKK IKEKYAEQDE EEREIRMALL ASSGKASQKD NPSQDGEDTT AKQSKPSTGE DDSLKVCYKC
1001: KKSGHLSRDC PDSTSAVDLT DVNVGRSRDG MDRSATPVDG SIVMDEDDIN ELGDEEKEKL IDLDYLTGIP VASDILLYAV PVCAPYNALQ TYKYRVKITP
1101: GTAKKGKAAK TAMSLFMHIP DATNREKELM KACTDPELVA AIVGNAKITA PGLTQLKQKQ KQKGKKAAKS N
0001: MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
Arabidopsis Description
emb1441Gb [Source:UniProtKB/TrEMBL;Acc:Q9LTX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.