Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G093200.2 | Wheat | cytosol | 94.71 | 96.41 |
| TraesCS5A01G087300.2 | Wheat | cytosol | 94.63 | 96.41 |
| TraesCS5D01G098900.2 | Wheat | cytosol | 92.53 | 94.11 |
| Os12t0564600-01 | Rice | plasma membrane | 79.36 | 81.62 |
| Zm00001d041582_P005 | Maize | cytosol | 76.17 | 75.04 |
| KXG23713 | Sorghum | cytosol | 76.59 | 74.77 |
| Zm00001d003610_P001 | Maize | cytosol | 6.54 | 70.91 |
| Solyc01g057850.2.1 | Tomato | cytosol | 34.4 | 69.73 |
| GSMUA_Achr3P24450_001 | Banana | cytosol | 58.56 | 68.7 |
| PGSC0003DMT400003104 | Potato | cytosol | 31.46 | 64.43 |
| CDX83176 | Canola | cytosol | 56.71 | 63.47 |
| CDY21443 | Canola | cytosol | 56.96 | 63.46 |
| AT5G49930.1 | Thale cress | cytosol | 57.13 | 63.06 |
| Bra000600.1-P | Field mustard | cytosol | 57.05 | 62.27 |
| VIT_05s0077g00460.t01 | Wine grape | cytosol | 58.72 | 61.95 |
| KRH11885 | Soybean | cytosol | 58.72 | 61.24 |
| KRH36919 | Soybean | nucleus | 58.05 | 60.54 |
| VIT_05s0020g00170.t01 | Wine grape | nucleus | 39.18 | 54.18 |
Protein Annotations
| MapMan:17.3.3.2.3 | Gene3D:2.30.310.10 | Gene3D:4.10.60.10 | UniProt:A0A287QMH6 | ncoils:Coil | InterPro:DUF3441 |
| InterPro:DUF814 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0008270 | EnsemblPlantsGene:HORVU5Hr1G022740 |
| EnsemblPlants:HORVU5Hr1G022740.2 | InterPro:IPR001878 | PFAM:PF00098 | PFAM:PF05670 | PFAM:PF05833 | PFAM:PF11923 |
| PFscan:PS50158 | PANTHER:PTHR15239 | PANTHER:PTHR15239:SF6 | SMART:SM00343 | SUPFAM:SSF57756 | UniParc:UPI000B471845 |
| InterPro:Znf_CCHC | InterPro:Znf_CCHC_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:117311719..117323192
Molecular Weight (calculated)
132667.0 Da
IEP (calculated)
7.868
GRAVY (calculated)
-0.715
Length
1192 amino acids
Sequence
(BLAST)
(BLAST)
0001: EHHNLGRKEG DRKASAAAAK MVKARMTTAD VAAEVKCLRR LIGMRLSNVY DITPKTYLFK LMNSSGITES GESEKVLLLM ESGVRLHTTQ YVRDKSTTPS
0101: GFTLKLRKHV RGKRLEDVRM LGYDRMILFQ FGLGSNAHFI ILELYAQGNI ILTDSEYTVM TLLRSHRDDN KGLAIMSRHR YPVEACRTFE RTDFTKLKDT
0201: LKLSNTVDDK ESSQVTPSSA DAQQPSESAN DGVPATDKLE EPANRTGKKS AAKIKQSGSD AKASNGTQSN RATLKTLIGE ALPYGPALAE HIILDAGLLP
0301: STKIGKDPET SLDDHTIQSL VESVTRFEDW LVNIISGQRI PEGYILMQNK MTAKKNVTSS EGSSINQKVY DEYCPILLTQ CKSREYDEFE TFDDALDEFY
0401: SKIESQRVNQ QHKAKEDSAV HRLNKIKLDQ ENRVHTLRKE ADHCITMAEL IEYNLEDVDA AMKAVRVSLA NGMSWEALSR MIKEEKKAGN PVAGLIDKLS
0501: FEKNCITLLL SNNLDDMDEE EKTAPVEKVE VDLSLSAHAN ARRWYEMKKK QETKQEKTID AHEKAFKAAE KKTRLQLAQE KTVAAITHMR KVHWFEKFNW
0601: FISSENYLIV SGRDAQQNEL VVKRYMSKGD LYVHAELHGA SSTIIKNHKP DSPIPPLTLN QAGCFTVCHS KAWDSKIVTS AWWVYPHQVS KTAPTGEYLT
0701: VGSFMIRGKK NFLPPHPLIM GFGILFRLDE SCLASHLNER RIRGEDEALP ETEAEPRLNE RRIRGEDEAL PETEAELQKQ QSNPEPDDKL ATGSETSKGA
0801: HDNESRRDHT AVHQNDDTNH SNLPTNVDTA NKSQQVAETK TVENSGTDAS VSSRLEDLLD KSLGLGPAKG SSKSPLLIST LSSLGGDTDD LDVKKSMVRE
0901: KPYVSKAERR KLKKGENACE STSDPQKVVK KPDNPQQEKG KDNTKAANPK TTRGQKGKLK KIKEKYAEQD EEEREIRMAL LASSGKASQK DNPSQDGEDT
1001: TAKQPKPSTG EDISLKVCYK CKKSGHLSRD CPESTSAVDL TDVNGGRGRD GMDRSATPVD GSIAMDEDDI HELGDEEKEK LIDLDYLTGI PVASDILLYA
1101: VPVCAPYNAL QTYKYRVKIT PGTAKKGKAA KTAMSLFMHI PDATNREKEL MKACTDPELV AAIIGNAKIT APGLTQLKQK QKQKGKKAAK NN
0101: GFTLKLRKHV RGKRLEDVRM LGYDRMILFQ FGLGSNAHFI ILELYAQGNI ILTDSEYTVM TLLRSHRDDN KGLAIMSRHR YPVEACRTFE RTDFTKLKDT
0201: LKLSNTVDDK ESSQVTPSSA DAQQPSESAN DGVPATDKLE EPANRTGKKS AAKIKQSGSD AKASNGTQSN RATLKTLIGE ALPYGPALAE HIILDAGLLP
0301: STKIGKDPET SLDDHTIQSL VESVTRFEDW LVNIISGQRI PEGYILMQNK MTAKKNVTSS EGSSINQKVY DEYCPILLTQ CKSREYDEFE TFDDALDEFY
0401: SKIESQRVNQ QHKAKEDSAV HRLNKIKLDQ ENRVHTLRKE ADHCITMAEL IEYNLEDVDA AMKAVRVSLA NGMSWEALSR MIKEEKKAGN PVAGLIDKLS
0501: FEKNCITLLL SNNLDDMDEE EKTAPVEKVE VDLSLSAHAN ARRWYEMKKK QETKQEKTID AHEKAFKAAE KKTRLQLAQE KTVAAITHMR KVHWFEKFNW
0601: FISSENYLIV SGRDAQQNEL VVKRYMSKGD LYVHAELHGA SSTIIKNHKP DSPIPPLTLN QAGCFTVCHS KAWDSKIVTS AWWVYPHQVS KTAPTGEYLT
0701: VGSFMIRGKK NFLPPHPLIM GFGILFRLDE SCLASHLNER RIRGEDEALP ETEAEPRLNE RRIRGEDEAL PETEAELQKQ QSNPEPDDKL ATGSETSKGA
0801: HDNESRRDHT AVHQNDDTNH SNLPTNVDTA NKSQQVAETK TVENSGTDAS VSSRLEDLLD KSLGLGPAKG SSKSPLLIST LSSLGGDTDD LDVKKSMVRE
0901: KPYVSKAERR KLKKGENACE STSDPQKVVK KPDNPQQEKG KDNTKAANPK TTRGQKGKLK KIKEKYAEQD EEEREIRMAL LASSGKASQK DNPSQDGEDT
1001: TAKQPKPSTG EDISLKVCYK CKKSGHLSRD CPESTSAVDL TDVNGGRGRD GMDRSATPVD GSIAMDEDDI HELGDEEKEK LIDLDYLTGI PVASDILLYA
1101: VPVCAPYNAL QTYKYRVKIT PGTAKKGKAA KTAMSLFMHI PDATNREKEL MKACTDPELV AAIIGNAKIT APGLTQLKQK QKQKGKKAAK NN
0001: MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
Arabidopsis Description
emb1441Gb [Source:UniProtKB/TrEMBL;Acc:Q9LTX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.