Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0564600-01 | Rice | plasma membrane | 76.69 | 80.07 |
| TraesCS5A01G087300.2 | Wheat | cytosol | 76.2 | 78.8 |
| TraesCS5B01G093200.2 | Wheat | cytosol | 76.03 | 78.57 |
| TraesCS5D01G098900.2 | Wheat | cytosol | 73.8 | 76.19 |
| HORVU5Hr1G022740.2 | Barley | nucleus | 75.04 | 76.17 |
| Zm00001d003610_P001 | Maize | cytosol | 6.69 | 73.64 |
| Solyc01g057850.2.1 | Tomato | cytosol | 34.63 | 71.26 |
| GSMUA_Achr3P24450_001 | Banana | cytosol | 59.42 | 70.77 |
| PGSC0003DMT400003104 | Potato | cytosol | 31.49 | 65.46 |
| CDX83176 | Canola | cytosol | 56.69 | 64.41 |
| CDY21443 | Canola | cytosol | 56.86 | 64.3 |
| AT5G49930.1 | Thale cress | cytosol | 57.27 | 64.17 |
| VIT_05s0077g00460.t01 | Wine grape | cytosol | 59.67 | 63.89 |
| Bra000600.1-P | Field mustard | cytosol | 56.94 | 63.1 |
| KRH11885 | Soybean | cytosol | 59.5 | 62.99 |
| KRH36919 | Soybean | nucleus | 58.68 | 62.12 |
| VIT_05s0020g00170.t01 | Wine grape | nucleus | 39.67 | 55.68 |
Protein Annotations
| MapMan:17.3.3.2.3 | Gene3D:2.30.310.10 | Gene3D:4.10.60.10 | UniProt:A0A1D6MX03 | ncoils:Coil | InterPro:DUF3441 |
| InterPro:DUF814 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR001878 |
| ProteinID:ONM33285.1 | PFAM:PF00098 | PFAM:PF05670 | PFAM:PF05833 | PFAM:PF11923 | PFscan:PS50158 |
| PANTHER:PTHR15239 | PANTHER:PTHR15239:SF6 | SMART:SM00343 | SUPFAM:SSF57756 | UniParc:UPI000842C2DC | EnsemblPlantsGene:Zm00001d041582 |
| EnsemblPlants:Zm00001d041582_P005 | EnsemblPlants:Zm00001d041582_T005 | InterPro:Znf_CCHC | InterPro:Znf_CCHC_sf | SEG:seg | : |
Description
zinc knuckle (CCHC-type) family protein
Coordinates
chr3:-:128236382..128248592
Molecular Weight (calculated)
134586.0 Da
IEP (calculated)
6.921
GRAVY (calculated)
-0.696
Length
1210 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVKARMTTTD VAAEVKCLRR LIGMRLANVY DITPKHLSAF GQTYLFKLMN SSGITESGES EKVLLLMESG VRFHTTQYVR DKSTTPSGFT LKLRKHIRNK
0101: RLEDVRMLGY DRIILFQFGL GSNAHFIILE LYAQGNILLT DSEYTVLTLL RSHRDDNKGL AIMSRHRYPV EACRVFGRTD FAKLKDMLTK PDKADDKEEI
0201: TSGSTDAQET SQSTNDEVLV TEISEKSLSK KEKKAAAKAK QFGSNAKVNN GAQSNKATLK TILGEALAYG PALAEHIILD AGLVPSTKVG KDPESTINDS
0301: TVQSLMESIT RFEDWLVDII SGQRIPEGYI LMQNKMTAKN ITPLEEASIN HKIYDEYCPV LLNQFKSREY NEFATFDAAL DEFYSKIESQ KVNQQQKAKE
0401: ESAAQRLNKI KLDQENRVHT LRKEVDHCVK MAELIEYNLE DVDAAILAVR VSLANEMSWE ALTRMIKEER KAGNPVAGLI DKLNFERNCI TLLLSNNLDD
0501: MDEDEKTAPV EKVEVDIALS AHANARRWYE MKKKQESKQE KTITAHDKAF KAAEKKTRLQ LAQEKTVAAI THMRKVHWFE KFNWFISSEN YLIISGRDAQ
0601: QNELIVKRYM SKGDLYVHAE LHGASSTIIK NHKPDTPIPP LTLNQAGCFT VCHSKAWDSK IVTSAWWVYP HQVSKTAPTG EYLTVGSFMI RGKKNFLPPH
0701: PLVMGFGILF RLDESSLASH LNERRVRGED EALHEMEAES RKKQSNPESD EDIGSEGANK ETHEDESNGQ TTNIQQNNDL ELPDLSSNIG TANSSELLPE
0801: IQAEETLDNG SSILKEETIE ASVSSQLDDL LDKTLCLGPA KVSGKSSLLT SIPSSLAEDD DDLEVKRPTI RDKPYISKAE RRKLKKGQVN DETATDSQNG
0901: EAVETPGTSK QEKGKAETKA TDSKASQPDT SQQEKGKANT KATGSKLSQP GNSQQEKGKG STHAGNAKVS RGQKGKLKKI KEKYAEQDEE EREIRMALLA
1001: SSGKALRKDK PSQDVEETSV KESKPSAGED DSSKICYKCK KAGHLSRDCP ESTSEVDRND GSISRSRDDT GTNTAPAGGN SPMDEDDVQE IGDEEKEKLI
1101: DLDYLTGNPL PNDILLYAVP VCAPYNALQT YKYRVKITPG TAKKGKAAKT AMSLFLHTPD ATNREKELMK ACTDPELVAA IVGNAKITAP GLTQLKQKQK
1201: QKGKKSAKQN
0101: RLEDVRMLGY DRIILFQFGL GSNAHFIILE LYAQGNILLT DSEYTVLTLL RSHRDDNKGL AIMSRHRYPV EACRVFGRTD FAKLKDMLTK PDKADDKEEI
0201: TSGSTDAQET SQSTNDEVLV TEISEKSLSK KEKKAAAKAK QFGSNAKVNN GAQSNKATLK TILGEALAYG PALAEHIILD AGLVPSTKVG KDPESTINDS
0301: TVQSLMESIT RFEDWLVDII SGQRIPEGYI LMQNKMTAKN ITPLEEASIN HKIYDEYCPV LLNQFKSREY NEFATFDAAL DEFYSKIESQ KVNQQQKAKE
0401: ESAAQRLNKI KLDQENRVHT LRKEVDHCVK MAELIEYNLE DVDAAILAVR VSLANEMSWE ALTRMIKEER KAGNPVAGLI DKLNFERNCI TLLLSNNLDD
0501: MDEDEKTAPV EKVEVDIALS AHANARRWYE MKKKQESKQE KTITAHDKAF KAAEKKTRLQ LAQEKTVAAI THMRKVHWFE KFNWFISSEN YLIISGRDAQ
0601: QNELIVKRYM SKGDLYVHAE LHGASSTIIK NHKPDTPIPP LTLNQAGCFT VCHSKAWDSK IVTSAWWVYP HQVSKTAPTG EYLTVGSFMI RGKKNFLPPH
0701: PLVMGFGILF RLDESSLASH LNERRVRGED EALHEMEAES RKKQSNPESD EDIGSEGANK ETHEDESNGQ TTNIQQNNDL ELPDLSSNIG TANSSELLPE
0801: IQAEETLDNG SSILKEETIE ASVSSQLDDL LDKTLCLGPA KVSGKSSLLT SIPSSLAEDD DDLEVKRPTI RDKPYISKAE RRKLKKGQVN DETATDSQNG
0901: EAVETPGTSK QEKGKAETKA TDSKASQPDT SQQEKGKANT KATGSKLSQP GNSQQEKGKG STHAGNAKVS RGQKGKLKKI KEKYAEQDEE EREIRMALLA
1001: SSGKALRKDK PSQDVEETSV KESKPSAGED DSSKICYKCK KAGHLSRDCP ESTSEVDRND GSISRSRDDT GTNTAPAGGN SPMDEDDVQE IGDEEKEKLI
1101: DLDYLTGNPL PNDILLYAVP VCAPYNALQT YKYRVKITPG TAKKGKAAKT AMSLFLHTPD ATNREKELMK ACTDPELVAA IVGNAKITAP GLTQLKQKQK
1201: QKGKKSAKQN
0001: MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
Arabidopsis Description
emb1441Gb [Source:UniProtKB/TrEMBL;Acc:Q9LTX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.