Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21443 | Canola | cytosol | 97.07 | 99.07 |
| CDX83176 | Canola | cytosol | 93.13 | 95.49 |
| AT5G49930.1 | Thale cress | cytosol | 90.84 | 91.85 |
| Solyc01g057850.2.1 | Tomato | cytosol | 40.02 | 74.32 |
| GSMUA_Achr3P24450_001 | Banana | cytosol | 63.74 | 68.5 |
| VIT_05s0077g00460.t01 | Wine grape | cytosol | 70.15 | 67.79 |
| PGSC0003DMT400003104 | Potato | cytosol | 36.08 | 67.7 |
| KRH11885 | Soybean | cytosol | 70.79 | 67.63 |
| KRH36919 | Soybean | nucleus | 70.7 | 67.54 |
| Zm00001d003610_P001 | Maize | cytosol | 6.41 | 63.64 |
| TraesCS5D01G098900.2 | Wheat | cytosol | 64.93 | 60.49 |
| Os12t0564600-01 | Rice | plasma membrane | 63.46 | 59.79 |
| TraesCS5B01G093200.2 | Wheat | cytosol | 63.19 | 58.92 |
| TraesCS5A01G087300.2 | Wheat | cytosol | 63.1 | 58.89 |
| VIT_05s0020g00170.t01 | Wine grape | nucleus | 45.88 | 58.12 |
| HORVU5Hr1G022740.2 | Barley | nucleus | 62.27 | 57.05 |
| Zm00001d041582_P005 | Maize | cytosol | 63.1 | 56.94 |
| KXG23713 | Sorghum | cytosol | 63.55 | 56.84 |
Protein Annotations
| MapMan:17.3.3.2.3 | Gene3D:2.30.310.10 | Gene3D:4.10.60.10 | EnsemblPlantsGene:Bra000600 | EnsemblPlants:Bra000600.1 | EnsemblPlants:Bra000600.1-P |
| ncoils:Coil | InterPro:DUF3441 | InterPro:DUF814 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0008270 | InterPro:IPR001878 | UniProt:M4C8S2 | PFAM:PF00098 | PFAM:PF05670 | PFAM:PF05833 |
| PFAM:PF11923 | PFscan:PS50158 | PANTHER:PTHR15239 | PANTHER:PTHR15239:SF6 | SMART:SM00343 | UniParc:UPI0002540191 |
| InterPro:Znf_CCHC | SEG:seg | : | : | : | : |
Description
AT5G49930 (E=0.0) emb1441 | emb1441 (embryo defective 1441); nucleic acid binding / zinc ion binding
Coordinates
chrA03:-:11993837..11998227
Molecular Weight (calculated)
122654.0 Da
IEP (calculated)
7.184
GRAVY (calculated)
-0.672
Length
1092 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRLFE RTTASKLQES LTAFSLKDHE AKDSESKEQN
0201: GGKKGGKSNE AKQFTLKNIL GDALGYGPQL SEHIILDAGL VPSTKLSEEK KLDDNEIQLL VQAVIVFEDW LEDIIYGQKV PEGYILMQKQ LLVNDTSSQG
0301: GVTKMYDEFC PILLNQFKSR VYEKFETFDA ALDEFYSKIE SQRSEFQQKA KEDSASQKLN KIRQDQENRV QILKKEVDRC VNMAELIEYN LEDVDAAILA
0401: VRVALAKGMG WDDLARMVKE EKKLGNPVAG VIDKLNLEKN CMTLLLCNNL DEMDDDEKTL PVEKVEVDLS LSAHGNARRW YEMKKKQETK QEKTVSAHEK
0501: AFKAAEKKTR HQLSQEKVVA TISHMRKIHW FEKFNWFISS ENYLVISGRD AQQNEMIVKR YMSKGDLYVH AELHGASSTV IKNHKPEQSV PPLTLNQAGC
0601: FTVCHSQAWD SKIVTSAWWV YPHQVSKTAP TGEYLTVGSF MIRGKKNFLP PHPLIMGFGL LFRLDESSLG AHLNERRVRG EEEGMNDVGM ETHAPDEQSD
0701: AESENEAENE EVSAAGEKNL QESDTALSQD TSSLDMNSSG IDGENVAAAT SQLEDLLDRT LGLGTATVAG KNHTIETSKD ELEEQEKKSV VRDKPYISKA
0801: QRRKLKMGES GNTAADDNPG QEKPERKEKS VSSGNTAADG NTEKEKQQSK AKNASSSSRQ ANKTIPENKP AGEKVSRGQR GKLKKMKEKY ADQDEEERKI
0901: RMALLASSGK PQKNDVEAQS TKPAVTEEKK PSEETEDAVK ICYRCKKVGH LARDCHGKEM DKVVMEEDDI HELGEEEKEK LIDVDYLTGN PLPTDVLLYA
1001: VPVCGPYNAL QSYKYRVKAI PGSMKKGKAA KTAMNLFTHM SEASVREKEL MKACTDPELM AALVGNVKIT AAGLTQLKQK QKKGKKSGKH HG
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRLFE RTTASKLQES LTAFSLKDHE AKDSESKEQN
0201: GGKKGGKSNE AKQFTLKNIL GDALGYGPQL SEHIILDAGL VPSTKLSEEK KLDDNEIQLL VQAVIVFEDW LEDIIYGQKV PEGYILMQKQ LLVNDTSSQG
0301: GVTKMYDEFC PILLNQFKSR VYEKFETFDA ALDEFYSKIE SQRSEFQQKA KEDSASQKLN KIRQDQENRV QILKKEVDRC VNMAELIEYN LEDVDAAILA
0401: VRVALAKGMG WDDLARMVKE EKKLGNPVAG VIDKLNLEKN CMTLLLCNNL DEMDDDEKTL PVEKVEVDLS LSAHGNARRW YEMKKKQETK QEKTVSAHEK
0501: AFKAAEKKTR HQLSQEKVVA TISHMRKIHW FEKFNWFISS ENYLVISGRD AQQNEMIVKR YMSKGDLYVH AELHGASSTV IKNHKPEQSV PPLTLNQAGC
0601: FTVCHSQAWD SKIVTSAWWV YPHQVSKTAP TGEYLTVGSF MIRGKKNFLP PHPLIMGFGL LFRLDESSLG AHLNERRVRG EEEGMNDVGM ETHAPDEQSD
0701: AESENEAENE EVSAAGEKNL QESDTALSQD TSSLDMNSSG IDGENVAAAT SQLEDLLDRT LGLGTATVAG KNHTIETSKD ELEEQEKKSV VRDKPYISKA
0801: QRRKLKMGES GNTAADDNPG QEKPERKEKS VSSGNTAADG NTEKEKQQSK AKNASSSSRQ ANKTIPENKP AGEKVSRGQR GKLKKMKEKY ADQDEEERKI
0901: RMALLASSGK PQKNDVEAQS TKPAVTEEKK PSEETEDAVK ICYRCKKVGH LARDCHGKEM DKVVMEEDDI HELGEEEKEK LIDVDYLTGN PLPTDVLLYA
1001: VPVCGPYNAL QSYKYRVKAI PGSMKKGKAA KTAMNLFTHM SEASVREKEL MKACTDPELM AALVGNVKIT AAGLTQLKQK QKKGKKSGKH HG
0001: MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS
Arabidopsis Description
emb1441Gb [Source:UniProtKB/TrEMBL;Acc:Q9LTX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.