Factsheet for Solyc01g057850.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003104	Potato	cytosol	85.37	86.25
Zm00001d003610_P001	Maize	cytosol	12.41	66.36
VIT_05s0020g00170.t01	Wine grape	nucleus	62.76	42.81
GSMUA_Achr3P24450_001	Banana	cytosol	72.28	41.83
CDX83176	Canola	cytosol	74.32	41.03
CDY21443	Canola	cytosol	74.32	40.84
VIT_05s0077g00460.t01	Wine grape	cytosol	77.72	40.44
AT5G49930.1	Thale cress	cytosol	74.15	40.37
KRH11885	Soybean	cytosol	78.06	40.16
Bra000600.1-P	Field mustard	cytosol	74.32	40.02
KRH36919	Soybean	nucleus	77.21	39.72
Os12t0564600-01	Rice	plasma membrane	72.62	36.84
TraesCS5A01G087300.2	Wheat	cytosol	70.58	35.47
TraesCS5B01G093200.2	Wheat	cytosol	70.58	35.44
TraesCS5D01G098900.2	Wheat	cytosol	70.24	35.24
Zm00001d041582_P005	Maize	cytosol	71.26	34.63
KXG23713	Sorghum	cytosol	71.43	34.4
HORVU5Hr1G022740.2	Barley	nucleus	69.73	34.4
Solyc01g057840.2.1	Tomato	nucleus	2.21	2.25

Protein Annotations

EnsemblPlants:Solyc01g057850.2.1	EnsemblPlantsGene:Solyc01g057850.2	Gene3D:2.30.310.10	InterPro:DUF814	ncoils:Coil	PANTHER:PTHR15239
PANTHER:PTHR15239:SF6	PFAM:PF05670	PFAM:PF05833	SEG:seg	UniParc:UPI0002761D31	UniProt:K4AVZ6
MapMan:17.3.3.2.3	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:64070392..64083526

Molecular Weight (calculated)

67153.5 Da

IEP (calculated)

7.597

GRAVY (calculated)

-0.532

Length

588 amino acids

Sequence
(BLAST)

001: MVKVRMNTAD VAAEVKCLRR LIGMRCSNVY DLSPKTYVFK LMNSSGISES GESEKVLLLM ESGVRLHTTD YLRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
101: LGYDRIILFQ FGLGSNAHYV ILELYAQGNI LLTDSDFMVM TLLRSHRDDD KGLAIMSRHR YPVETCRVFK RTTTEKLHAA LMSSSQTDKI EHVEDNERGN
201: GGSDVPQQKQ VNQKSIKATN STKKGNDRAK SPTLKVVLGE ALGYGPALSE HIILDAGLVP NTKIDADFTL EGNTLLSLTE AVKQFEDWLE DIILGEKVPE
301: GYILMQQQAL SKKDSTICDS GSSEKIYDEF CPLLLNQLKC RNFMKFETFD AALDEFYSKI ESQRSEQQQK SKESTAMQRL NKIRTDQENR VVTLKQEVEH
401: CIKMAELIEY NLEDADAAIL AVRVALANGM SWEDLARMVK EEKRSGNPVA GLIDKLHLER NCMTLLLSNN LDEIDDDEKT QPVDKVEVDL ALSAHANARR
501: WYEMKKKQEN KQEKTVTAHE KAFKAAERKT RLQLSQEKTV AVISHMRKVH WFEKFNWFIS SENYLVISGR DAQQNEMIVK RYMSKGDL

Best Arabidopsis Sequence Match ( AT5G49930.1 )
(BLAST)

0001: MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ
0101: LGYDRIIVFQ FGLGANAHYV ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRVFE RTTVSKLQES LTAFVLKDHD AKQIEPKEQN
0201: GGKKGGKSND STGAKQYTLK NILGDALGYG PQLSEHIILD AGLVPTTKLS EDKKLDDNEI QLLVQAVIVF EDWLEDIING QKVPEGYILM QKQILANDTT
0301: SESGGVKKMY DEFCSILLNQ FKSRVYEKFE TFDAALDEFY SKIESQRSEQ QQKAKEDSAS LKLNKIRQDQ ENRVQILKKE VNHCVNMAEL IEYNLEDVDA
0401: AILAVRVALA KGMGWDDLAR MVKEEKKLGN PVAGVIDRLY LEKNCMTLLL CNNLDEMDDD EKTVPVEKVE VDLSLSAHGN ARRWYEMKKK QETKQEKTVS
0501: AHEKAFRAAE KKTRHQLSQE KVVATISHMR KVHWFEKFNW FISSENYLVI SGRDAQQNEM IVKRYMSKGD LYVHAELHGA SSTVIKNHKP EQNVPPLTLN
0601: QAGCFTVCHS QAWDSKIVTS AWWVYPHQVT KTAPTGEYLT VGSFMIRGKK NFLPPHPLIM GFGLLFRLDE SSLGAHLNER RVRGEEEGMN DVVMETHAPD
0701: EHSDTESENE AVNEVVSASG EVDLQESSTA LSQDTSSLDM SSSGITEENV ASATSQLEDL LDRTLGLGAA TVAGKKDTIE TSKDDMEEKM KQEEKNAVVR
0801: DKPYMSKAER RKLKMGQSGN TAADGNTGQE KQQRKEKDVS SLSQATKSIP DNKPAGEKVS RGQRGKLKKM KEKYADQDED ERKIRMALLA SSGKPQKTDV
0901: ESQNAKTAVT EVKKPSEETD DAVKICYRCK KVGHLARDCH GKETSDMDKV VMEEDDIHEV GDEEKEKLID VDYLTGNPLP TDILLYAVPV CGPYNALQSY
1001: KYRVKAIPGS MKKGKAAKTA MNLFTHMSEA SVREKELMKA CTDPELMAAL VGNVKITAAG LTQLKQKQKK GKKSGKQQHS

Arabidopsis Description

emb1441Gb [Source:UniProtKB/TrEMBL;Acc:Q9LTX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.