Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024318_P009 | Maize | plasma membrane | 86.95 | 82.29 |
| Zm00001d049370_P002 | Maize | mitochondrion | 87.42 | 81.52 |
| Os08t0220600-01 | Rice | cytosol | 68.71 | 69.37 |
| VIT_18s0001g07650.t01 | Wine grape | cytosol | 39.31 | 45.7 |
| GSMUA_Achr8P33580_001 | Banana | plasma membrane | 45.13 | 42.77 |
| KRH16856 | Soybean | nucleus | 40.72 | 41.31 |
| KRH72469 | Soybean | nucleus | 38.36 | 40.07 |
| PGSC0003DMT400024218 | Potato | cytosol | 34.59 | 36.97 |
| Solyc04g076400.2.1 | Tomato | cytosol | 34.28 | 35.74 |
| KXG29488 | Sorghum | nucleus | 34.91 | 29.17 |
| KXG21293 | Sorghum | cytosol | 25.94 | 27.64 |
| EES17116 | Sorghum | nucleus | 27.99 | 25.5 |
Protein Annotations
| EnsemblPlants:OQU80080 | EnsemblPlantsGene:SORBI_3007G076200 | InterPro:Oberon_PHD | PANTHER:PTHR21736 | PANTHER:PTHR21736:SF34 | PFAM:PF07227 |
| ProteinID:EES14709.2 | ProteinID:OQU80080 | ProteinID:OQU80080.1 | ProteinID:OQU80082.1 | SEG:seg | unigene:Sbi.6047 |
| UniParc:UPI00081AC32D | UniProt:C5YIK3 | MapMan:12.3.3.1.2.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:8823579..8832617
Molecular Weight (calculated)
70729.3 Da
IEP (calculated)
8.280
GRAVY (calculated)
-0.458
Length
636 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPEKQNGMS LMDKRQLVYE VARWPQGAVE ILQCWTRREL LELICAELGK ERKYTNVPKA KMIAYLLKLV SRNSGKNGQL KDDNANVMLS GRDNKDETQM
101: KESEEQSRPL KTANSDPSIR REARPGSSVV CSNVACQATR NAGDKYCKRC SCCICNKYDD NKDPSLWLVC SSDNPYSGCS CGVSCHLNCA LKDKKAGIVK
201: NGCNKLDCSF CCVSCGKINW LMRSLQKQLA IAREARRVDV LCERLSLSYK MVKGSERYKE IVSLISSAVK ILEKEVGGAL DQVSVITGRG IVNRLTCGAE
301: VQKLCSSALE IVDSTVDNIL EFKSNNSSKS LGSQPQIVEI TPFSVAIVLK YQGNIGIPQI DGSKVWHRSA KVCNYSSEPT CHILRPNTRC LVSGLSPSTE
401: YFFKVLPFSS IQRFTEWEAK CSTRSLDHGS SQCSTQNSES MCLKEDSMQH QKKDLNVQNH QRTIQYDSPK GSTNSSENNL SCERYSKRAK VARLDGASDN
501: DENQLPPTSE VLPFASSNSS PSEAPSKPDL LIGTPDSASK NYVEQQYEYC VKVVRWLEHK GHMDNDFRVK FLTWFSLKAT AQDRRIVGAF VDALIGDPAS
601: LVAQLVDAFM DVICIKEKPS QAQQKDAYCK VASGFC
101: KESEEQSRPL KTANSDPSIR REARPGSSVV CSNVACQATR NAGDKYCKRC SCCICNKYDD NKDPSLWLVC SSDNPYSGCS CGVSCHLNCA LKDKKAGIVK
201: NGCNKLDCSF CCVSCGKINW LMRSLQKQLA IAREARRVDV LCERLSLSYK MVKGSERYKE IVSLISSAVK ILEKEVGGAL DQVSVITGRG IVNRLTCGAE
301: VQKLCSSALE IVDSTVDNIL EFKSNNSSKS LGSQPQIVEI TPFSVAIVLK YQGNIGIPQI DGSKVWHRSA KVCNYSSEPT CHILRPNTRC LVSGLSPSTE
401: YFFKVLPFSS IQRFTEWEAK CSTRSLDHGS SQCSTQNSES MCLKEDSMQH QKKDLNVQNH QRTIQYDSPK GSTNSSENNL SCERYSKRAK VARLDGASDN
501: DENQLPPTSE VLPFASSNSS PSEAPSKPDL LIGTPDSASK NYVEQQYEYC VKVVRWLEHK GHMDNDFRVK FLTWFSLKAT AQDRRIVGAF VDALIGDPAS
601: LVAQLVDAFM DVICIKEKPS QAQQKDAYCK VASGFC
001: MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.