Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16856 | Soybean | nucleus | 59.78 | 52.15 |
| KRH72469 | Soybean | nucleus | 57.22 | 51.4 |
| PGSC0003DMT400024218 | Potato | cytosol | 54.11 | 49.75 |
| Solyc04g076400.2.1 | Tomato | cytosol | 54.3 | 48.69 |
| GSMUA_Achr8P33580_001 | Banana | plasma membrane | 51.19 | 41.73 |
| Os08t0220600-01 | Rice | cytosol | 46.44 | 40.32 |
| OQU80080 | Sorghum | cytosol | 45.7 | 39.31 |
| Zm00001d049370_P002 | Maize | mitochondrion | 47.17 | 37.83 |
| VIT_11s0052g00830.t01 | Wine grape | nucleus | 50.82 | 37.67 |
| Zm00001d024318_P009 | Maize | plasma membrane | 46.25 | 37.65 |
| VIT_11s0016g04240.t01 | Wine grape | nucleus | 38.39 | 29.13 |
| VIT_04s0008g04380.t01 | Wine grape | cytosol | 37.29 | 23.92 |
Protein Annotations
| ArrayExpress:VIT_18s0001g07650 | EMBL:FN595227 | EnsemblPlants:VIT_18s0001g07650.t01 | EnsemblPlantsGene:VIT_18s0001g07650 | InterPro:Oberon_PHD | ncoils:Coil |
| PANTHER:PTHR21736 | PANTHER:PTHR21736:SF24 | PFAM:PF07227 | ProteinID:CCB45663 | ProteinID:CCB45663.1 | UniParc:UPI0002108FB6 |
| UniProt:F6H141 | MapMan:12.3.3.1.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr18:+:5908466..5912901
Molecular Weight (calculated)
62684.4 Da
IEP (calculated)
8.179
GRAVY (calculated)
-0.480
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MESAFSGFVL DPEKCSRLSL GEKRELVHEI AQWSKDAPEI LRSFTRRELL EIICAEMGKE RKYTGFTKFR MIEHLLKLIS KKSKNRTDNS IASSPAKTQI
101: GSKRQRKKEN PLQPLTDLDH FSPEKCKEVK TLLCQNLACR ASLSPEDAFC KRCSCCICHQ YDDNKDPSLW LTCSSGSPNK DDSCGMSCHL TCALKHERTG
201: ITKNGCRPKL DGEFYCASCG KINGLLRTWR KQLMVAKEAR RVDVLCLRVF LSHKILKGTE QYKDLQKTME TAVKRLKNEV GPLDRVCTKM ARGIVNRLSC
301: GAEVQKLCTS AVEAFDSMFP DPYPADTDQK EQAGMQIRFE ECSPTSVVIV LGYEDHLLEE FLGCRLWHRK STMKDYPEKP TYIVLRPEKR FQVTDLNPST
401: EYLCKVSLFS STRVLGVWEA KWVTPSLSRS SVSALDDEHR RGENTLMLQE YSQMDSTNSK SDYEYSVRVI KWLECQGHIA EDFRVKFLTW FSLKATMQER
501: RVVSVFVDTL IDDPPSLAEQ LIHSFMDEIC YDQKSVSKQG FCASLWH
101: GSKRQRKKEN PLQPLTDLDH FSPEKCKEVK TLLCQNLACR ASLSPEDAFC KRCSCCICHQ YDDNKDPSLW LTCSSGSPNK DDSCGMSCHL TCALKHERTG
201: ITKNGCRPKL DGEFYCASCG KINGLLRTWR KQLMVAKEAR RVDVLCLRVF LSHKILKGTE QYKDLQKTME TAVKRLKNEV GPLDRVCTKM ARGIVNRLSC
301: GAEVQKLCTS AVEAFDSMFP DPYPADTDQK EQAGMQIRFE ECSPTSVVIV LGYEDHLLEE FLGCRLWHRK STMKDYPEKP TYIVLRPEKR FQVTDLNPST
401: EYLCKVSLFS STRVLGVWEA KWVTPSLSRS SVSALDDEHR RGENTLMLQE YSQMDSTNSK SDYEYSVRVI KWLECQGHIA EDFRVKFLTW FSLKATMQER
501: RVVSVFVDTL IDDPPSLAEQ LIHSFMDEIC YDQKSVSKQG FCASLWH
001: MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.