Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72469 | Soybean | nucleus | 86.92 | 89.49 |
| VIT_18s0001g07650.t01 | Wine grape | cytosol | 52.15 | 59.78 |
| PGSC0003DMT400024218 | Potato | cytosol | 42.9 | 45.21 |
| Solyc04g076400.2.1 | Tomato | cytosol | 42.58 | 43.77 |
| OQU80080 | Sorghum | cytosol | 41.31 | 40.72 |
| Os08t0220600-01 | Rice | cytosol | 40.03 | 39.84 |
| Zm00001d024318_P009 | Maize | plasma membrane | 42.26 | 39.43 |
| Zm00001d049370_P002 | Maize | mitochondrion | 42.26 | 38.86 |
| GSMUA_Achr8P33580_001 | Banana | plasma membrane | 40.83 | 38.15 |
| KRH19033 | Soybean | nucleus | 40.19 | 34.24 |
| KRH02856 | Soybean | nucleus | 40.03 | 34.06 |
| KRH39246 | Soybean | nucleus, plastid | 28.23 | 27.19 |
| KRH48444 | Soybean | nucleus | 30.62 | 26.7 |
| KRH41601 | Soybean | nucleus, plastid | 27.75 | 26.69 |
| KRH60306 | Soybean | nucleus | 29.35 | 25.52 |
Protein Annotations
| EMBL:ACUP02009023 | EnsemblPlants:KRH16856 | EnsemblPlantsGene:GLYMA_14G182300 | EntrezGene:100785502 | InterPro:Oberon_PHD | PANTHER:PTHR21736 |
| PANTHER:PTHR21736:SF24 | PFAM:PF07227 | ProteinID:KRH16856 | ProteinID:KRH16856.1 | UniParc:UPI000296CDD9 | UniProt:I1MB08 |
| MapMan:12.3.3.1.2.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:44543764..44548980
Molecular Weight (calculated)
70496.6 Da
IEP (calculated)
8.168
GRAVY (calculated)
-0.374
Length
627 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEEENKGCA FLGTNSTYSG FLLDPEKCGM LSLPDKQRLV REIARQSKDA SSMLQSFTRR ELLEIICAEL GKERKYTGYT KSQMIEHLLK IISKNSNSHI
101: NGNMPAQSPA KSCIGTKRKK KPASQDLHHA PLGNSKEKTV KTFLCQNVAC KATLNPEDSF CKRCSCCICH HYDDNKDPSL WLTCSSDLPN EESCGMSCHL
201: QCALSNQMSS ILKGSCGIKL DGAFCCVSCG KINELMKTWW KQLLVAKEAR RTDILSLRIS LAHRILVGTE VYKEVQKIVE TALKLLENEV GSLDHVYASM
301: TRGIVSRLSC GAEVQRLCSS ALECFDSKFS GLFSICVENK DAPTCSIHFE ECLPTSVVIV LEYKDKLLKN FLGCRLWHRI STIDYPEQPT FIVLRPEKRF
401: KLENLHPSTE YFCKASLFSS TGILGAAEAK WVTPCEPSNP SKVISGGGNR FRWSPQRPSG TGVDMCTQDR ITAEIHPTES ANSDMKLSTG EHPGKKHIIL
501: NIRSRFEEFL SKPQPVEPFS YKNLAAVSPS TPSKSYEMRQ IPGLNSRKRS KENDYEYSVR VVKWLEHQGH IDEIFRVRFL TWFSLKATQQ ERRVVSAFVD
601: ALIDDPASLA DQLIHTFSDE ICCEQKS
101: NGNMPAQSPA KSCIGTKRKK KPASQDLHHA PLGNSKEKTV KTFLCQNVAC KATLNPEDSF CKRCSCCICH HYDDNKDPSL WLTCSSDLPN EESCGMSCHL
201: QCALSNQMSS ILKGSCGIKL DGAFCCVSCG KINELMKTWW KQLLVAKEAR RTDILSLRIS LAHRILVGTE VYKEVQKIVE TALKLLENEV GSLDHVYASM
301: TRGIVSRLSC GAEVQRLCSS ALECFDSKFS GLFSICVENK DAPTCSIHFE ECLPTSVVIV LEYKDKLLKN FLGCRLWHRI STIDYPEQPT FIVLRPEKRF
401: KLENLHPSTE YFCKASLFSS TGILGAAEAK WVTPCEPSNP SKVISGGGNR FRWSPQRPSG TGVDMCTQDR ITAEIHPTES ANSDMKLSTG EHPGKKHIIL
501: NIRSRFEEFL SKPQPVEPFS YKNLAAVSPS TPSKSYEMRQ IPGLNSRKRS KENDYEYSVR VVKWLEHQGH IDEIFRVRFL TWFSLKATQQ ERRVVSAFVD
601: ALIDDPASLA DQLIHTFSDE ICCEQKS
001: MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.