Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48444 | Soybean | nucleus | 89.4 | 80.95 |
| KRH41601 | Soybean | nucleus, plastid | 75.73 | 75.61 |
| KRH60306 | Soybean | nucleus | 75.42 | 68.1 |
| Solyc05g018390.2.1 | Tomato | nucleus | 64.67 | 65.07 |
| VIT_11s0016g04240.t01 | Wine grape | nucleus | 66.82 | 60.33 |
| GSMUA_Achr10P... | Banana | mitochondrion | 19.51 | 60.19 |
| PGSC0003DMT400070566 | Potato | cytosol | 31.64 | 59.2 |
| GSMUA_Achr4P01640_001 | Banana | nucleus | 55.3 | 55.99 |
| HORVU5Hr1G026240.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.94 | 51.46 |
| CDX77426 | Canola | cytosol | 26.42 | 50.74 |
| Bra015040.1-P | Field mustard | cytosol | 25.96 | 49.85 |
| Os05t0145400-01 | Rice | cytosol | 46.39 | 49.75 |
| Os12t0533500-01 | Rice | nucleus | 51.61 | 47.52 |
| TraesCS5D01G109600.1 | Wheat | nucleus | 49.92 | 46.63 |
| TraesCS5B01G102800.1 | Wheat | nucleus | 49.77 | 46.48 |
| TraesCS5A01G097100.1 | Wheat | nucleus | 49.62 | 46.34 |
| TraesCS1B01G108200.1 | Wheat | cytosol | 43.78 | 46.34 |
| TraesCS1D01G090400.1 | Wheat | cytosol | 43.63 | 46.18 |
| TraesCS1A01G108900.1 | Wheat | cytosol | 42.7 | 46.03 |
| HORVU1Hr1G019570.1 | Barley | nucleus | 43.32 | 45.93 |
| KXG21293 | Sorghum | cytosol | 41.63 | 45.39 |
| CDX77427 | Canola | nucleus | 41.47 | 45.38 |
| Zm00001d041715_P003 | Maize | nucleus | 48.08 | 44.91 |
| Bra015039.1-P | Field mustard | nucleus | 40.86 | 44.71 |
| EES17116 | Sorghum | nucleus | 47.47 | 44.27 |
| Zm00001d024824_P001 | Maize | cytosol | 31.95 | 44.16 |
| Zm00001d023897_P003 | Maize | cytosol | 47.31 | 42.78 |
| HORVU7Hr1G096840.1 | Barley | plastid | 49.77 | 42.63 |
| CDY39555 | Canola | nucleus | 41.17 | 41.42 |
| GSMUA_Achr10P... | Banana | extracellular | 13.06 | 35.71 |
| KRH02856 | Soybean | nucleus | 34.1 | 30.12 |
| KRH19033 | Soybean | nucleus | 33.64 | 29.76 |
| KRH16856 | Soybean | nucleus | 27.19 | 28.23 |
| AT2G18870.1 | Thale cress | nucleus, plasma membrane | 10.14 | 27.62 |
| KRH72469 | Soybean | nucleus | 24.88 | 26.6 |
Protein Annotations
| EntrezGene:100816714 | MapMan:12.3.3.1.2.2 | Gene3D:2.60.40.10 | UniProt:A0A0R0IKE0 | EMBL:ACUP02005925 | InterPro:FN3_dom |
| InterPro:FN3_sf | EnsemblPlantsGene:GLYMA_09G188000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003961 |
| InterPro:IPR013783 | InterPro:Ig-like_fold | EnsemblPlants:KRH39246 | ProteinID:KRH39246 | ProteinID:KRH39246.1 | ProteinID:KRH39247.1 |
| ProteinID:KRH39248.1 | ProteinID:KRH39249.1 | ProteinID:KRH39250.1 | InterPro:Oberon_PHD | PFAM:PF07227 | PFscan:PS50853 |
| PANTHER:PTHR21736 | PANTHER:PTHR21736:SF17 | SUPFAM:SSF49265 | UniParc:UPI0002339153 | : | : |
Description
hypothetical protein
Coordinates
chr9:-:41251283..41259847
Molecular Weight (calculated)
72255.2 Da
IEP (calculated)
6.307
GRAVY (calculated)
-0.486
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETKSTSKI VKKQDSKKVS GLTNQPSRKQ HRKGENPVRF VPAPDPPSDF GHSNSWICKN SACRAVLSKD DTFCRRCSCC ICHLFDDNKD PSLWLVCTCE
101: SSQGDSCGLS CHIECALQHE KVGVVDHGQL MQLDGGYCCA SCGKVTGILG CWKKQLNIAK DARRVDVLCY RIYLSYRLLD GTSKYKELHE MVKEAKAKLE
201: TEVGPVNGVS AKMARGIVSR LPIASDVQKL CSLAIEKADE WLATVPNVHP ESREGSLPAA CKVVFEEVTA FSVKIILIEM SNASSSVDIK GYKLWYYKSR
301: EESHTKDPVS VFPKAQRRIL ISNLQPCTEY TFRIVSFTDT SDLGHSEAKC FTKSIEILEK NSSSSVAMNK KKENLQTECN SSGSEMEPNP TMEDSGFKVR
401: DLGKILHLSW AQEQGCFEEF CCADKRNCCG KSETIKPTNL QEQLPSVSRD LDLNVVSVPD LNEELTPLFE SSRDEDNGCT LQQAVEADDD AASHDLEKNL
501: AISHGSGGSQ TWNHGPTGEV PAVDSRGDAC RKRMASTNEE THDCDSTLIN DSPLRASDGP FSLDENFEYC VKVIRWLECQ GHIKQEFRLK LLTWFSLRST
601: EQERRVVNTF IQTLIDDPSS LAGQLVDSFS DIISNKRPRN GLSSNKAVSS S
101: SSQGDSCGLS CHIECALQHE KVGVVDHGQL MQLDGGYCCA SCGKVTGILG CWKKQLNIAK DARRVDVLCY RIYLSYRLLD GTSKYKELHE MVKEAKAKLE
201: TEVGPVNGVS AKMARGIVSR LPIASDVQKL CSLAIEKADE WLATVPNVHP ESREGSLPAA CKVVFEEVTA FSVKIILIEM SNASSSVDIK GYKLWYYKSR
301: EESHTKDPVS VFPKAQRRIL ISNLQPCTEY TFRIVSFTDT SDLGHSEAKC FTKSIEILEK NSSSSVAMNK KKENLQTECN SSGSEMEPNP TMEDSGFKVR
401: DLGKILHLSW AQEQGCFEEF CCADKRNCCG KSETIKPTNL QEQLPSVSRD LDLNVVSVPD LNEELTPLFE SSRDEDNGCT LQQAVEADDD AASHDLEKNL
501: AISHGSGGSQ TWNHGPTGEV PAVDSRGDAC RKRMASTNEE THDCDSTLIN DSPLRASDGP FSLDENFEYC VKVIRWLECQ GHIKQEFRLK LLTWFSLRST
601: EQERRVVNTF IQTLIDDPSS LAGQLVDSFS DIISNKRPRN GLSSNKAVSS S
001: MDSSSTKSKI SHSRKTNKKS NKKHESNGKQ QQQQDVDGGG GCLRSSWICK NASCRANVPK EDSFCKRCSC CVCHNFDENK DPSLWLVCEP EKSDDVEFCG
101: LSCHIECAFR EVKVGVIALG NLMKLDGCFC CYSCGKVSQI LGCWKKQLVA AKEARRRDGL CYRIDLGYRL LNGTSRFSEL HEIVRAAKSM LEDEVGPLDG
201: PTARTDRGIV SRLPVAANVQ ELCTSAIKKA GELSANAGRD LVPAACRFHF EDIAPKQVTL RLIELPSAVE YDVKGYKLWY FKKGEMPEDD LFVDCSRTER
301: RMVISDLEPC TEYTFRVVSY TEAGIFGHSN AMCFTKSVEI LKPVDGKEKR TIDLVGNAQP SDREEKSSIS SRFQIGQLGK YVQLAEAQEE GLLEAFYNVD
401: TEKICEPPEE ELPPRRPHGF DLNVVSVPDL NEEFTPPDSS GGEDNGVPLN SLAEADGGDH DDNCDDAVSN GRRKNNNDCL VISDGSGDDT GFDFLMTRKR
501: KAISDSNDSE NHECDSSSID DTLEKCVKVI RWLEREGHIK TTFRVRFLTW FSMSSTAQEQ SVVSTFVQTL EDDPGSLAGQ LVDAFTDVVS TKRPNNGVMT
601: SH
101: LSCHIECAFR EVKVGVIALG NLMKLDGCFC CYSCGKVSQI LGCWKKQLVA AKEARRRDGL CYRIDLGYRL LNGTSRFSEL HEIVRAAKSM LEDEVGPLDG
201: PTARTDRGIV SRLPVAANVQ ELCTSAIKKA GELSANAGRD LVPAACRFHF EDIAPKQVTL RLIELPSAVE YDVKGYKLWY FKKGEMPEDD LFVDCSRTER
301: RMVISDLEPC TEYTFRVVSY TEAGIFGHSN AMCFTKSVEI LKPVDGKEKR TIDLVGNAQP SDREEKSSIS SRFQIGQLGK YVQLAEAQEE GLLEAFYNVD
401: TEKICEPPEE ELPPRRPHGF DLNVVSVPDL NEEFTPPDSS GGEDNGVPLN SLAEADGGDH DDNCDDAVSN GRRKNNNDCL VISDGSGDDT GFDFLMTRKR
501: KAISDSNDSE NHECDSSSID DTLEKCVKVI RWLEREGHIK TTFRVRFLTW FSMSSTAQEQ SVVSTFVQTL EDDPGSLAGQ LVDAFTDVVS TKRPNNGVMT
601: SH
Arabidopsis Description
VIL1VIN3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.