Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024824_P001 | Maize | cytosol | 59.97 | 76.01 |
| Os05t0145400-01 | Rice | cytosol | 63.82 | 62.77 |
| TraesCS1D01G090400.1 | Wheat | cytosol | 63.48 | 61.63 |
| TraesCS1B01G108200.1 | Wheat | cytosol | 62.98 | 61.14 |
| TraesCS1A01G108900.1 | Wheat | cytosol | 61.14 | 60.43 |
| HORVU1Hr1G019570.1 | Barley | nucleus | 60.13 | 58.47 |
| GSMUA_Achr10P... | Banana | mitochondrion | 19.93 | 56.4 |
| GSMUA_Achr4P01640_001 | Banana | nucleus | 51.09 | 47.43 |
| CDX77426 | Canola | cytosol | 25.8 | 45.43 |
| Bra015040.1-P | Field mustard | cytosol | 25.13 | 44.25 |
| EES17116 | Sorghum | nucleus | 50.42 | 43.12 |
| KRH39246 | Soybean | nucleus, plastid | 45.39 | 41.63 |
| Solyc05g018390.2.1 | Tomato | nucleus | 45.06 | 41.58 |
| KRH41601 | Soybean | nucleus, plastid | 44.72 | 40.95 |
| KRH48444 | Soybean | nucleus | 46.23 | 38.39 |
| CDX77427 | Canola | nucleus | 37.19 | 37.31 |
| Bra015039.1-P | Field mustard | nucleus | 37.02 | 37.14 |
| KRH60306 | Soybean | nucleus | 43.89 | 36.34 |
| CDY39555 | Canola | nucleus | 37.19 | 34.31 |
| PGSC0003DMT400070566 | Potato | cytosol | 19.26 | 33.05 |
| GSMUA_Achr10P... | Banana | extracellular | 12.4 | 31.09 |
| VIT_04s0008g04380.t01 | Wine grape | cytosol | 43.72 | 30.6 |
| KXG29488 | Sorghum | nucleus | 33.17 | 26.02 |
| OQU80080 | Sorghum | cytosol | 27.64 | 25.94 |
| AT2G18870.1 | Thale cress | nucleus, plasma membrane | 9.88 | 24.69 |
Protein Annotations
| MapMan:12.3.3.1.2.2 | Gene3D:2.60.40.10 | UniProt:A0A1B6P6M9 | InterPro:FN3_dom | InterPro:FN3_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003961 | InterPro:IPR013783 | InterPro:Ig-like_fold | EnsemblPlants:KXG21293 |
| ProteinID:KXG21293 | ProteinID:KXG21293.1 | ProteinID:OQU77401.1 | InterPro:Oberon_PHD | PFAM:PF00041 | PFAM:PF07227 |
| PFscan:PS50853 | PANTHER:PTHR21736 | PANTHER:PTHR21736:SF25 | EnsemblPlantsGene:SORBI_3009G041700 | SUPFAM:SSF49265 | UniParc:UPI0003C702A1 |
Description
hypothetical protein
Coordinates
chr9:-:3989909..3994860
Molecular Weight (calculated)
66872.2 Da
IEP (calculated)
7.980
GRAVY (calculated)
-0.521
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKTPPVKAS KNTELQKQSA PNLTITNGHT STKEVAKTEH PINDVKRITT WICKNLACKA VRPSEDSFCK RCSCCICHKF DDNKDPSQWL VCSSENDSKN
101: CCGSSCHIEC AFRDKRLGCF DLEQIIHLDG SYSCASCGKI SGILGYWKRQ LVIGKDARRV DNLCQRIFLS YRLLEGTTQF KELHEIIKDA KAKLESEVGP
201: LDGISAKNAH GIVSRFSAGI AVQKLCSTAI QKADEWLSSP DLHLRDSLPV ACRFKFVDIK SSSLIVILKE TSSSDTIKGY KLWYWKSREQ PSMEQPVIVP
301: KDKRKILLFD LTPCTEYSFR VISFTDDGVL GHSESRCRTE SREIFGMRAP QNAVGGGTQA QKRDRNHSCK SSGFKIRDIW KNFQEALDAE GCFEGFSEDV
401: HEGSCSRNVT ETELSGACRK LHFNSSVPDL NAEVPVPMDY TTEKHYYSKK GLVRSNDSGD SETCAVGQTA EPPAVESRSV SKVNTVQVNK CEQNGASAIC
501: HEKMLSGSTR QLDGDYEHCV KVIRQLECDG HIENCFRMKF LTWYSLRSTD QERKAVTTYV KTLSDEPSSL AEQLVDSFGE ILNSKKAKTG FCNKLWH
101: CCGSSCHIEC AFRDKRLGCF DLEQIIHLDG SYSCASCGKI SGILGYWKRQ LVIGKDARRV DNLCQRIFLS YRLLEGTTQF KELHEIIKDA KAKLESEVGP
201: LDGISAKNAH GIVSRFSAGI AVQKLCSTAI QKADEWLSSP DLHLRDSLPV ACRFKFVDIK SSSLIVILKE TSSSDTIKGY KLWYWKSREQ PSMEQPVIVP
301: KDKRKILLFD LTPCTEYSFR VISFTDDGVL GHSESRCRTE SREIFGMRAP QNAVGGGTQA QKRDRNHSCK SSGFKIRDIW KNFQEALDAE GCFEGFSEDV
401: HEGSCSRNVT ETELSGACRK LHFNSSVPDL NAEVPVPMDY TTEKHYYSKK GLVRSNDSGD SETCAVGQTA EPPAVESRSV SKVNTVQVNK CEQNGASAIC
501: HEKMLSGSTR QLDGDYEHCV KVIRQLECDG HIENCFRMKF LTWYSLRSTD QERKAVTTYV KTLSDEPSSL AEQLVDSFGE ILNSKKAKTG FCNKLWH
001: MDSSSTKSKI SHSRKTNKKS NKKHESNGKQ QQQQDVDGGG GCLRSSWICK NASCRANVPK EDSFCKRCSC CVCHNFDENK DPSLWLVCEP EKSDDVEFCG
101: LSCHIECAFR EVKVGVIALG NLMKLDGCFC CYSCGKVSQI LGCWKKQLVA AKEARRRDGL CYRIDLGYRL LNGTSRFSEL HEIVRAAKSM LEDEVGPLDG
201: PTARTDRGIV SRLPVAANVQ ELCTSAIKKA GELSANADLV PAACRFHFED IAPKQVTLRL IELPSAVEYD VKGYKLWYFK KGEMPEDDLF VDCSRTERRM
301: VISDLEPCTE YTFRVVSYTE AGIFGHSNAM CFTKSVEILK PVDGKEKRTI DLVGNAQPSD REEKSSISSR FQIGQLGKYV QLAEAQEEGL LEAFYNVDTE
401: KICEPPEEEL PPRRPHGFDL NVVSVPDLNE EFTPPDSSGG EDNGVPLNSL AEADGGDHDD NCDDAVSNGR RKNNNDCLVI SDGSGDDTGF DFLMTRKRKA
501: ISDSNDSENH ECDSSSIDDT LEKCVKVIRW LEREGHIKTT FRVRFLTWFS MSSTAQEQSV VSTFVQTLED DPGSLAGQLV DAFTDVVSTK RPNNGVMTSH
101: LSCHIECAFR EVKVGVIALG NLMKLDGCFC CYSCGKVSQI LGCWKKQLVA AKEARRRDGL CYRIDLGYRL LNGTSRFSEL HEIVRAAKSM LEDEVGPLDG
201: PTARTDRGIV SRLPVAANVQ ELCTSAIKKA GELSANADLV PAACRFHFED IAPKQVTLRL IELPSAVEYD VKGYKLWYFK KGEMPEDDLF VDCSRTERRM
301: VISDLEPCTE YTFRVVSYTE AGIFGHSNAM CFTKSVEILK PVDGKEKRTI DLVGNAQPSD REEKSSISSR FQIGQLGKYV QLAEAQEEGL LEAFYNVDTE
401: KICEPPEEEL PPRRPHGFDL NVVSVPDLNE EFTPPDSSGG EDNGVPLNSL AEADGGDHDD NCDDAVSNGR RKNNNDCLVI SDGSGDDTGF DFLMTRKRKA
501: ISDSNDSENH ECDSSSIDDT LEKCVKVIRW LEREGHIKTT FRVRFLTWFS MSSTAQEQSV VSTFVQTLED DPGSLAGQLV DAFTDVVSTK RPNNGVMTSH
Arabidopsis Description
VIL1VIN3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.