Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023897_P003 | Maize | cytosol | 88.95 | 86.11 |
| HORVU5Hr1G026240.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 54.09 | 78.54 |
| TraesCS5A01G097100.1 | Wheat | nucleus | 72.74 | 72.74 |
| TraesCS5D01G109600.1 | Wheat | nucleus | 72.74 | 72.74 |
| TraesCS5B01G102800.1 | Wheat | nucleus | 72.6 | 72.6 |
| Os12t0533500-01 | Rice | nucleus | 71.59 | 70.58 |
| HORVU7Hr1G096840.1 | Barley | plastid | 72.31 | 66.32 |
| GSMUA_Achr10P... | Banana | mitochondrion | 19.08 | 63.03 |
| GSMUA_Achr4P01640_001 | Banana | nucleus | 53.08 | 57.54 |
| Solyc05g018390.2.1 | Tomato | nucleus | 47.35 | 51.0 |
| Zm00001d024824_P001 | Maize | cytosol | 33.29 | 49.26 |
| KRH39246 | Soybean | nucleus, plastid | 44.91 | 48.08 |
| KRH41601 | Soybean | nucleus, plastid | 44.76 | 47.85 |
| PGSC0003DMT400070566 | Potato | cytosol | 23.1 | 46.26 |
| KRH48444 | Soybean | nucleus | 47.49 | 46.04 |
| Bra015040.1-P | Field mustard | cytosol | 21.95 | 45.13 |
| KRH60306 | Soybean | nucleus | 46.48 | 44.94 |
| CDX77426 | Canola | cytosol | 21.81 | 44.84 |
| CDX77427 | Canola | nucleus | 33.86 | 39.66 |
| Bra015039.1-P | Field mustard | nucleus | 33.29 | 38.99 |
| VIT_04s0008g04380.t01 | Wine grape | cytosol | 45.77 | 37.4 |
| GSMUA_Achr10P... | Banana | extracellular | 12.34 | 36.13 |
| CDY39555 | Canola | nucleus | 33.43 | 36.01 |
| Zm00001d053875_P001 | Maize | cytosol, plastid | 30.27 | 27.76 |
| Zm00001d024318_P009 | Maize | plasma membrane | 26.69 | 27.68 |
| Zm00001d049370_P002 | Maize | mitochondrion | 25.39 | 25.95 |
| AT2G18870.1 | Thale cress | nucleus, plasma membrane | 8.61 | 25.1 |
| Zm00001d015293_P015 | Maize | nucleus, plastid | 29.99 | 24.73 |
Protein Annotations
| EntrezGene:103650592 | MapMan:12.3.3.1.2.2 | Gene3D:2.60.40.10 | UniProt:A0A1D6MXU0 | InterPro:FN3_dom | InterPro:FN3_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003961 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| ProteinID:ONM33543.1 | ProteinID:ONM33545.1 | ProteinID:ONM33549.1 | InterPro:Oberon_PHD | PFAM:PF00041 | PFAM:PF07227 |
| PFscan:PS50853 | PANTHER:PTHR21736 | PANTHER:PTHR21736:SF17 | SMART:SM00060 | SUPFAM:SSF49265 | UniParc:UPI000221008F |
| EnsemblPlantsGene:Zm00001d041715 | EnsemblPlants:Zm00001d041715_P003 | EnsemblPlants:Zm00001d041715_T003 | SEG:seg | : | : |
Description
VIN3-like protein 1
Coordinates
chr3:-:134686969..134693750
Molecular Weight (calculated)
77143.6 Da
IEP (calculated)
6.327
GRAVY (calculated)
-0.518
Length
697 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASGGNEPE LAVVTDVCNA SSTPQENRLA GDSNTISENA QESLSSLPEQ ESNDASVNTE KQEPGISKCK SVDEIPKTVT VKRCKNVDSK KVSSNNNNNP
101: RFTGSPALKK HPTKGDHLFE LCENGMAQDT KPPSTRICIN SACKAVFNSD NTFCKRCSCC ICHGFDDNKD PSLWLVCSSE TGDQDCCGSS FHVECALKHR
201: KAGCIELAQS IQLDGNYCCA ACGKVIGILG FWKRQLVVAK DARRVDSLCS RIYLSHRLLD GTTRFKELHQ IVEDAKAKLE SEVGPLDGTS SKMARGIVGR
301: LPVAADVQQL CSLAIEKADE WLSSNIQSET KQNDTLPSAC RFKFEDITAS SLVLVLKEAV SSQYHAIKGY KLWYWNSREA PYTGEPAVFP KDQRRILISN
401: LQPCTEYSFR IISFTEDGEL GHSESKIFTK SVEIIHKNTE HGAEGCSSSA KRAGKRQNAR SSGFQVRQLG NVFRRAQTEN GYPSTLCKYE IEDSCDQSES
501: VIPDKDQFRC GASRKLDLNE TSVPDLNAEV VMPTECCQNE NGCTSGKNAF TKSNGCGDSE TCAEGHVGDA PAMESRSQSR KQASDLEQET CLDDSNLVAR
601: AARLFAPRLG QLDDNYEYCV KIIRWLECSG LIEKDFRMKF LTWFSLRSTE QERRVVITFI RTLIDEPSSL AAQLLDSFEE IVTSKRPRTG FCTKLWH
101: RFTGSPALKK HPTKGDHLFE LCENGMAQDT KPPSTRICIN SACKAVFNSD NTFCKRCSCC ICHGFDDNKD PSLWLVCSSE TGDQDCCGSS FHVECALKHR
201: KAGCIELAQS IQLDGNYCCA ACGKVIGILG FWKRQLVVAK DARRVDSLCS RIYLSHRLLD GTTRFKELHQ IVEDAKAKLE SEVGPLDGTS SKMARGIVGR
301: LPVAADVQQL CSLAIEKADE WLSSNIQSET KQNDTLPSAC RFKFEDITAS SLVLVLKEAV SSQYHAIKGY KLWYWNSREA PYTGEPAVFP KDQRRILISN
401: LQPCTEYSFR IISFTEDGEL GHSESKIFTK SVEIIHKNTE HGAEGCSSSA KRAGKRQNAR SSGFQVRQLG NVFRRAQTEN GYPSTLCKYE IEDSCDQSES
501: VIPDKDQFRC GASRKLDLNE TSVPDLNAEV VMPTECCQNE NGCTSGKNAF TKSNGCGDSE TCAEGHVGDA PAMESRSQSR KQASDLEQET CLDDSNLVAR
601: AARLFAPRLG QLDDNYEYCV KIIRWLECSG LIEKDFRMKF LTWFSLRSTE QERRVVITFI RTLIDEPSSL AAQLLDSFEE IVTSKRPRTG FCTKLWH
001: MDSSSTKSKI SHSRKTNKKS NKKHESNGKQ QQQQDVDGGG GCLRSSWICK NASCRANVPK EDSFCKRCSC CVCHNFDENK DPSLWLVCEP EKSDDVEFCG
101: LSCHIECAFR EVKVGVIALG NLMKLDGCFC CYSCGKVSQI LGCWKKQLVA AKEARRRDGL CYRIDLGYRL LNGTSRFSEL HEIVRAAKSM LEDEVGPLDG
201: PTARTDRGIV SRLPVAANVQ ELCTSAIKKA GELSANAGRD LVPAACRFHF EDIAPKQVTL RLIELPSAVE YDVKGYKLWY FKKGEMPEDD LFVDCSRTER
301: RMVISDLEPC TEYTFRVVSY TEAGIFGHSN AMCFTKSVEI LKPVDGKEKR TIDLVGNAQP SDREEKSSIS SRFQIGQLGK YVQLAEAQEE GLLEAFYNVD
401: TEKICEPPEE ELPPRRPHGF DLNVVSVPDL NEEFTPPDSS GGEDNGVPLN SLAEADGGDH DDNCDDAVSN GRRKNNNDCL VISDGSGDDT GFDFLMTRKR
501: KAISDSNDSE NHECDSSSID DTLEKCVKVI RWLEREGHIK TTFRVRFLTW FSMSSTAQEQ SVVSTFVQTL EDDPGSLAGQ LVDAFTDVVS TKRPNNGVMT
601: SH
101: LSCHIECAFR EVKVGVIALG NLMKLDGCFC CYSCGKVSQI LGCWKKQLVA AKEARRRDGL CYRIDLGYRL LNGTSRFSEL HEIVRAAKSM LEDEVGPLDG
201: PTARTDRGIV SRLPVAANVQ ELCTSAIKKA GELSANAGRD LVPAACRFHF EDIAPKQVTL RLIELPSAVE YDVKGYKLWY FKKGEMPEDD LFVDCSRTER
301: RMVISDLEPC TEYTFRVVSY TEAGIFGHSN AMCFTKSVEI LKPVDGKEKR TIDLVGNAQP SDREEKSSIS SRFQIGQLGK YVQLAEAQEE GLLEAFYNVD
401: TEKICEPPEE ELPPRRPHGF DLNVVSVPDL NEEFTPPDSS GGEDNGVPLN SLAEADGGDH DDNCDDAVSN GRRKNNNDCL VISDGSGDDT GFDFLMTRKR
501: KAISDSNDSE NHECDSSSID DTLEKCVKVI RWLEREGHIK TTFRVRFLTW FSMSSTAQEQ SVVSTFVQTL EDDPGSLAGQ LVDAFTDVVS TKRPNNGVMT
601: SH
Arabidopsis Description
VIL1VIN3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.