Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053875_P001 | Maize | cytosol, plastid | 77.4 | 86.05 |
| KXG29488 | Sorghum | nucleus | 75.86 | 84.23 |
| Os02t0152500-01 | Rice | nucleus | 63.2 | 71.3 |
| TraesCS6D01G113600.1 | Wheat | nucleus | 53.73 | 60.53 |
| TraesCS6B01G151600.2 | Wheat | nucleus | 53.73 | 60.53 |
| HORVU6Hr1G022770.6 | Barley | cytosol, nucleus, plastid | 53.61 | 60.32 |
| TraesCS6A01G123400.1 | Wheat | nucleus | 53.49 | 60.27 |
| GSMUA_Achr4P02170_001 | Banana | cytosol | 39.17 | 50.38 |
| GSMUA_Achr3P05080_001 | Banana | cytosol | 37.87 | 50.0 |
| GSMUA_Achr5P16400_001 | Banana | cytosol | 32.54 | 47.66 |
| GSMUA_Achr9P13690_001 | Banana | plasma membrane | 36.57 | 46.54 |
| CDY29247 | Canola | cytosol, nucleus, plastid | 20.24 | 43.29 |
| CDY59604 | Canola | nucleus | 20.47 | 42.72 |
| CDY14184 | Canola | cytosol | 25.68 | 42.63 |
| CDY51654 | Canola | cytosol | 26.27 | 41.34 |
| Bra024456.1-P | Field mustard | nucleus | 21.07 | 41.3 |
| CDX68633 | Canola | nucleus | 29.23 | 39.77 |
| Bra011173.1-P | Field mustard | nucleus | 29.7 | 39.22 |
| VIT_11s0052g00830.t01 | Wine grape | nucleus | 33.96 | 38.89 |
| CDY28168 | Canola | nucleus | 29.35 | 38.75 |
| CDY03544 | Canola | nucleus | 28.52 | 38.62 |
| CDX72220 | Canola | nucleus | 28.28 | 38.24 |
| KRH02856 | Soybean | nucleus | 33.14 | 37.99 |
| Bra010297.1-P | Field mustard | nucleus | 28.76 | 37.97 |
| KRH19033 | Soybean | nucleus | 33.02 | 37.91 |
| Bra024097.1-P | Field mustard | cytosol | 28.28 | 37.4 |
| Bra006824.1-P | Field mustard | nucleus | 21.42 | 37.09 |
| AT5G57380.1 | Thale cress | nucleus | 26.86 | 36.61 |
| AT4G30200.2 | Thale cress | nucleus | 30.18 | 35.71 |
| Solyc07g018270.2.1 | Tomato | cytosol | 31.12 | 35.59 |
| CDY11872 | Canola | mitochondrion | 23.91 | 35.5 |
| CDX88618 | Canola | mitochondrion | 24.38 | 35.4 |
| CDY42262 | Canola | nucleus | 23.55 | 35.35 |
| Bra020445.1-P | Field mustard | nucleus | 23.08 | 34.88 |
| Zm00001d049370_P002 | Maize | mitochondrion | 28.05 | 34.75 |
| CDY47942 | Canola | nucleus | 23.08 | 34.64 |
| Zm00001d024318_P009 | Maize | plasma membrane | 27.46 | 34.52 |
| AT2G18880.1 | Thale cress | nucleus | 20.83 | 33.27 |
| Zm00001d024824_P001 | Maize | cytosol | 17.4 | 31.21 |
| Zm00001d023897_P003 | Maize | cytosol | 25.92 | 30.42 |
| Zm00001d041715_P003 | Maize | nucleus | 24.73 | 29.99 |
| PGSC0003DMT400019884 | Potato | cytosol | 12.43 | 28.46 |
Protein Annotations
| EnsemblPlants:Zm00001d015293_P015 | EnsemblPlants:Zm00001d015293_T015 | EnsemblPlantsGene:Zm00001d015293 | EntrezGene:100193423 | InterPro:Oberon_PHD | PANTHER:PTHR21736 |
| PANTHER:PTHR21736:SF24 | PFAM:PF07227 | ProteinID:AQK68608.1 | SEG:seg | UniParc:UPI00084347F7 | UniProt:A0A1D6H141 |
| MapMan:12.3.3.1.2.2 | : | : | : | : | : |
Description
VIN3-like protein 2
Coordinates
chr5:-:82992352..82999659
Molecular Weight (calculated)
93671.3 Da
IEP (calculated)
8.122
GRAVY (calculated)
-0.479
Length
845 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPRGGQHP SSLPSFHGFP IPVLLRAATG GSPHGSPRAA TADWPLRSGI LRSSPAVEVP SAAGHPSCPA RRTRPPPNPR FIVHARRLAV PALRIAGRGT
101: VIDPTKCRLM SVDEKRELVR DLSKSPESAP DRLQSWTRRE IVEILCSDLG RERKYTGLSK QRMLDYLFRV VSRKSSGPVE HVHEKEKGKD KESILEPNTT
201: NHQSPAKRPR KSDNPSRLPI ITNNSAASDV TGPTNNLRFC QNLACRAILR DNFCRRCSCC ICFSYDDNKD PSLWLSCSSD QHLQKDTCGF SCHLECALKD
301: ERTGILQSGQ GKKLDGGYYC IRCWKQNDLL GCWKKQLVIA KDARRLDVLC HRIYLSHRIL VSTEKYLVLH DIVDTALKKL EAEVGPLSGA PNMGRGIVSR
401: LTVGAEVQKL CAQAVDAVES LFSGVSPASS KIQRPCMMRP NFVKFEAITQ TSVMVFLDLV DCPMLAQEAT SFNIWHRVAV TESYPSNPTG IILAPLKKLL
501: VTWLAPATSY IFKVVAFKNS IELGSWEIRM KTSWQKDDPR GSMPGGTGLG QNSESPKANS DGQSDPSSEG VDSNNNTAVY ADLNKSPESD FEYCENPEIL
601: DSNKASHHPS ERINDLQNIQ MAADGVTEVT ELEEAPGLSA SALDEEPNAC VQTVLLRDSN PLEHNQRTVV PRSHDTSNIL AGHELVIVGP RYSGSVPPTA
701: PRSVENSKDN GGRASKPKPC DIVVQNGSSK PEREPGNSSN KRATDKMDDF GHKDSFSEVS YEYCVRVVRW LECEGYIETN FRMKFLTWFS LRATLQERKI
801: VSVYVDTLIE DPVSLSGQLV DSFSERIYSK KRPSMPSGFC MDLWH
101: VIDPTKCRLM SVDEKRELVR DLSKSPESAP DRLQSWTRRE IVEILCSDLG RERKYTGLSK QRMLDYLFRV VSRKSSGPVE HVHEKEKGKD KESILEPNTT
201: NHQSPAKRPR KSDNPSRLPI ITNNSAASDV TGPTNNLRFC QNLACRAILR DNFCRRCSCC ICFSYDDNKD PSLWLSCSSD QHLQKDTCGF SCHLECALKD
301: ERTGILQSGQ GKKLDGGYYC IRCWKQNDLL GCWKKQLVIA KDARRLDVLC HRIYLSHRIL VSTEKYLVLH DIVDTALKKL EAEVGPLSGA PNMGRGIVSR
401: LTVGAEVQKL CAQAVDAVES LFSGVSPASS KIQRPCMMRP NFVKFEAITQ TSVMVFLDLV DCPMLAQEAT SFNIWHRVAV TESYPSNPTG IILAPLKKLL
501: VTWLAPATSY IFKVVAFKNS IELGSWEIRM KTSWQKDDPR GSMPGGTGLG QNSESPKANS DGQSDPSSEG VDSNNNTAVY ADLNKSPESD FEYCENPEIL
601: DSNKASHHPS ERINDLQNIQ MAADGVTEVT ELEEAPGLSA SALDEEPNAC VQTVLLRDSN PLEHNQRTVV PRSHDTSNIL AGHELVIVGP RYSGSVPPTA
701: PRSVENSKDN GGRASKPKPC DIVVQNGSSK PEREPGNSSN KRATDKMDDF GHKDSFSEVS YEYCVRVVRW LECEGYIETN FRMKFLTWFS LRATLQERKI
801: VSVYVDTLIE DPVSLSGQLV DSFSERIYSK KRPSMPSGFC MDLWH
001: MSVDEKRQLV YELSKQSHLA AEVLQAWSRQ EILQILCAEM GKERKYTGLT KVKIIETLLK IVSEKNSGEC EGKKRDSDCL PIQRNTKRQR KVDNPSRYVI
101: PATNIVTSNN ASGSCSSVNT KGESTTIYCK NLACRAVLRQ EDSFCRRCSC CICRKYDDNK DPSLWLTCSS DPPFEGESCG FSCHLECAFN TEKSGLGKDK
201: QSEGCCFYCV SCGKANSLLE CWKKQLTIAK ETRRVEVLCY RLFLVQKLLK SSTKYRNLCE VVDEAVKTLE ADVGPLTGLP MKMGRGIVNR LHSGPDVQKL
301: CSSALESLET IATTPPDVAA LPSPRSSKMQ QDTATTGSTK IRFEDVNATS LTVVLASNEI PSPPNIVHYS IWHRKVPEKD YPEKSTCTLF IPNTRFVVSG
401: LAPASEYCFK VVSYSGTREM GVDEINVLTR SAEEGANCSS AVERSVSPLT NCSTLSSNPS SVEAESNNDY IVPKKPSSKN EDNNSPSVDE SAAKRMKRTT
501: DSDIVQIEKD VEQIVLLDDE EQEAVLDKTE SETPVVVTTK SLVGNRNSSD ASLPITPFRS DEIKNRQARI EISMKDNCNN GDHSANGGTE SGLEHCVKII
601: RQLECSGHID KNFRQKFLTW YSLRATSQEI RVVKIFIDTF IDDPMALAEQ LIDTFDDRVS IKRSAVGGSG ASAVVPSGFC MKLWH
101: PATNIVTSNN ASGSCSSVNT KGESTTIYCK NLACRAVLRQ EDSFCRRCSC CICRKYDDNK DPSLWLTCSS DPPFEGESCG FSCHLECAFN TEKSGLGKDK
201: QSEGCCFYCV SCGKANSLLE CWKKQLTIAK ETRRVEVLCY RLFLVQKLLK SSTKYRNLCE VVDEAVKTLE ADVGPLTGLP MKMGRGIVNR LHSGPDVQKL
301: CSSALESLET IATTPPDVAA LPSPRSSKMQ QDTATTGSTK IRFEDVNATS LTVVLASNEI PSPPNIVHYS IWHRKVPEKD YPEKSTCTLF IPNTRFVVSG
401: LAPASEYCFK VVSYSGTREM GVDEINVLTR SAEEGANCSS AVERSVSPLT NCSTLSSNPS SVEAESNNDY IVPKKPSSKN EDNNSPSVDE SAAKRMKRTT
501: DSDIVQIEKD VEQIVLLDDE EQEAVLDKTE SETPVVVTTK SLVGNRNSSD ASLPITPFRS DEIKNRQARI EISMKDNCNN GDHSANGGTE SGLEHCVKII
601: RQLECSGHID KNFRQKFLTW YSLRATSQEI RVVKIFIDTF IDDPMALAEQ LIDTFDDRVS IKRSAVGGSG ASAVVPSGFC MKLWH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.