Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29488 | Sorghum | nucleus | 74.63 | 73.46 |
| Zm00001d053875_P001 | Maize | cytosol, plastid | 69.69 | 68.68 |
| TraesCS6D01G113600.1 | Wheat | nucleus | 68.36 | 68.27 |
| TraesCS6B01G151600.2 | Wheat | nucleus | 67.82 | 67.73 |
| TraesCS6A01G123400.1 | Wheat | nucleus | 67.69 | 67.6 |
| HORVU6Hr1G022770.6 | Barley | cytosol, nucleus, plastid | 67.42 | 67.24 |
| Zm00001d015293_P015 | Maize | nucleus, plastid | 71.3 | 63.2 |
| GSMUA_Achr3P05080_001 | Banana | cytosol | 44.73 | 52.34 |
| GSMUA_Achr4P02170_001 | Banana | cytosol | 45.79 | 52.21 |
| GSMUA_Achr5P16400_001 | Banana | cytosol | 36.85 | 47.83 |
| GSMUA_Achr9P13690_001 | Banana | plasma membrane | 41.52 | 46.84 |
| CDY29247 | Canola | cytosol, nucleus, plastid | 23.23 | 44.05 |
| CDY59604 | Canola | nucleus | 23.36 | 43.21 |
| CDY14184 | Canola | cytosol | 29.24 | 43.03 |
| Bra024456.1-P | Field mustard | nucleus | 24.17 | 42.0 |
| CDY51654 | Canola | cytosol | 29.51 | 41.15 |
| VIT_11s0052g00830.t01 | Wine grape | nucleus | 38.58 | 39.16 |
| KRH02856 | Soybean | nucleus | 38.32 | 38.94 |
| Bra011173.1-P | Field mustard | nucleus | 33.11 | 38.75 |
| CDX68633 | Canola | nucleus | 32.04 | 38.65 |
| KRH19033 | Soybean | nucleus | 37.92 | 38.59 |
| CDY03544 | Canola | nucleus | 31.91 | 38.3 |
| CDY28168 | Canola | nucleus | 32.71 | 38.28 |
| CDX72220 | Canola | nucleus | 31.64 | 37.92 |
| Bra010297.1-P | Field mustard | nucleus | 32.31 | 37.81 |
| Solyc07g018270.2.1 | Tomato | cytosol | 36.98 | 37.48 |
| Bra024097.1-P | Field mustard | cytosol | 31.38 | 36.78 |
| AT4G30200.2 | Thale cress | nucleus | 34.45 | 36.13 |
| AT5G57380.1 | Thale cress | nucleus | 29.91 | 36.13 |
| Bra006824.1-P | Field mustard | nucleus | 23.5 | 36.07 |
| CDY42262 | Canola | nucleus | 26.7 | 35.52 |
| CDY11872 | Canola | mitochondrion | 26.84 | 35.33 |
| Os08t0220600-01 | Rice | cytosol | 29.64 | 35.24 |
| Bra020445.1-P | Field mustard | nucleus | 26.17 | 35.06 |
| CDY47942 | Canola | nucleus | 26.3 | 34.99 |
| AT2G18880.1 | Thale cress | nucleus | 24.7 | 34.97 |
| CDX88618 | Canola | mitochondrion | 26.97 | 34.71 |
| Os05t0145400-01 | Rice | cytosol | 24.83 | 30.64 |
| Os12t0533500-01 | Rice | nucleus | 28.44 | 30.13 |
| PGSC0003DMT400019884 | Potato | cytosol | 14.55 | 29.54 |
Protein Annotations
| MapMan:12.3.3.1.2.2 | EntrezGene:4328327 | EMBL:AK101341 | ProteinID:BAD38062.1 | ProteinID:BAD38597.1 | ProteinID:BAF07832.1 |
| ProteinID:BAS77019.1 | ProteinID:EAZ21771.1 | InterPro:FN3_dom | InterPro:FN3_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003961 | InterPro:Oberon_PHD | EnsemblPlantsGene:Os02g0152500 | EnsemblPlants:Os02t0152500-01 | PFAM:PF07227 |
| PFscan:PS50853 | PANTHER:PTHR21736 | PANTHER:PTHR21736:SF24 | UniProt:Q67IU4 | SUPFAM:SSF49265 | UniParc:UPI000042646A |
| RefSeq:XP_015625715.1 | SEG:seg | : | : | : | : |
Description
leaf inclination2, Leaf Inclination 2, VIN3-LIKE 2, VERNALIZATION INSENSITIVE 3-LIKE 3Chromatin remodeling factor, Protein containing PHD domain, FNIII domain and VID domain, Positive regulator of flowering, Regulation of leaf angle (Os02t0152500-01);Non-protein coding transcript. (Os02t0152500-02)
Coordinates
chr2:-:2876561..2882177
Molecular Weight (calculated)
82639.0 Da
IEP (calculated)
7.574
GRAVY (calculated)
-0.484
Length
749 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPYAGVPI DPAKCRLMSV DEKRELVREL SKRPESAPDK LQSWSRREIV EILCADLGRE RKYTGLSKQR MLEYLFRVVT GKSSGGGVVE HVQEKEPTPE
101: PNTANHQSPA KRQRKSDNPS RLPIVASSPT TEIPRPASNA RFCHNLACRA TLNPEDKFCR RCSCCICFKY DDNKDPSLWL FCSSDQPLQK DSCVFSCHLE
201: CALKDGRTGI MQSGQCKKLD GGYYCTRCRK QNDLLGSWKK QLVIAKDARR LDVLCHRIFL SHKILVSTEK YLVLHEIVDT AMKKLEAEVG PISGVANMGR
301: GIVSRLAVGA EVQKLCARAI ETMESLFCGS PSNLQFQRSR MIPSNFVKFE AITQTSVTVV LDLGPILAQD VTCFNVWHRV AATGSFSSSP TGIILAPLKT
401: LVVTQLVPAT SYIFKVVAFS NYKEFGSWEA KMKTSCQKEV DLKGLMPGGS GLDQNNGSPK ANSGGQSDPS SEGVDSNNNT AVYADLNKSP ESDFEYCENP
501: EILDSDKASH HPNEPTNNSQ SMPMVVARVT EVSGLEEAPG LSASALDEEP NSAVQTQLLR ESSNSMEQNQ RSEVPGSQDA SNAPAGNEVV IVPPRYSGSI
601: PPTAPRYMEN GKDISGRSLK AKPGDNILQN GSSKPEREPG NSSNKRTSGK CEEIGHKDGC PEASYEYCVK VVRWLECEGY IETNFRVKFL TWYSLRATPH
701: DRKIVSVYVN TLIDDPVSLS GQLADTFSEA IYSKRPPSVR SGFCMELWH
101: PNTANHQSPA KRQRKSDNPS RLPIVASSPT TEIPRPASNA RFCHNLACRA TLNPEDKFCR RCSCCICFKY DDNKDPSLWL FCSSDQPLQK DSCVFSCHLE
201: CALKDGRTGI MQSGQCKKLD GGYYCTRCRK QNDLLGSWKK QLVIAKDARR LDVLCHRIFL SHKILVSTEK YLVLHEIVDT AMKKLEAEVG PISGVANMGR
301: GIVSRLAVGA EVQKLCARAI ETMESLFCGS PSNLQFQRSR MIPSNFVKFE AITQTSVTVV LDLGPILAQD VTCFNVWHRV AATGSFSSSP TGIILAPLKT
401: LVVTQLVPAT SYIFKVVAFS NYKEFGSWEA KMKTSCQKEV DLKGLMPGGS GLDQNNGSPK ANSGGQSDPS SEGVDSNNNT AVYADLNKSP ESDFEYCENP
501: EILDSDKASH HPNEPTNNSQ SMPMVVARVT EVSGLEEAPG LSASALDEEP NSAVQTQLLR ESSNSMEQNQ RSEVPGSQDA SNAPAGNEVV IVPPRYSGSI
601: PPTAPRYMEN GKDISGRSLK AKPGDNILQN GSSKPEREPG NSSNKRTSGK CEEIGHKDGC PEASYEYCVK VVRWLECEGY IETNFRVKFL TWYSLRATPH
701: DRKIVSVYVN TLIDDPVSLS GQLADTFSEA IYSKRPPSVR SGFCMELWH
001: MSVDEKRQLV YELSKQSHLA AEVLQAWSRQ EILQILCAEM GKERKYTGLT KVKIIETLLK IVSEKNSGEC EGKKRDSDCL PIQRNTKRQR KVDNPSRYVI
101: PATNIVTSNN ASGSCSSVNT KGESTTIYCK NLACRAVLRQ EDSFCRRCSC CICRKYDDNK DPSLWLTCSS DPPFEGESCG FSCHLECAFN TEKSGLGKDK
201: QSEGCCFYCV SCGKANSLLE CWKKQLTIAK ETRRVEVLCY RLFLVQKLLK SSTKYRNLCE VVDEAVKTLE ADVGPLTGLP MKMGRGIVNR LHSGPDVQKL
301: CSSALESLET IATTPPDVAA LPSPRSSKMQ QDTATTGSTK IRFEDVNATS LTVVLASNEI PSPPNIVHYS IWHRKVPEKD YPEKSTCTLF IPNTRFVVSG
401: LAPASEYCFK VVSYSGTREM GVDEINVLTR SAEEGANCSS AVERSVSPLT NCSTLSSNPS SVEAESNNDY IVPKKPSSKN EDNNSPSVDE SAAKRMKRTT
501: DSDIVQIEKD VEQIVLLDDE EQEAVLDKTE SETPVVVTTK SLVGNRNSSD ASLPITPFRS DEIKNRQARI EISMKDNCNN GDHSANGGTE SGLEHCVKII
601: RQLECSGHID KNFRQKFLTW YSLRATSQEI RVVKIFIDTF IDDPMALAEQ LIDTFDDRVS IKRSAVGGSG ASAVVPSGFC MKLWH
101: PATNIVTSNN ASGSCSSVNT KGESTTIYCK NLACRAVLRQ EDSFCRRCSC CICRKYDDNK DPSLWLTCSS DPPFEGESCG FSCHLECAFN TEKSGLGKDK
201: QSEGCCFYCV SCGKANSLLE CWKKQLTIAK ETRRVEVLCY RLFLVQKLLK SSTKYRNLCE VVDEAVKTLE ADVGPLTGLP MKMGRGIVNR LHSGPDVQKL
301: CSSALESLET IATTPPDVAA LPSPRSSKMQ QDTATTGSTK IRFEDVNATS LTVVLASNEI PSPPNIVHYS IWHRKVPEKD YPEKSTCTLF IPNTRFVVSG
401: LAPASEYCFK VVSYSGTREM GVDEINVLTR SAEEGANCSS AVERSVSPLT NCSTLSSNPS SVEAESNNDY IVPKKPSSKN EDNNSPSVDE SAAKRMKRTT
501: DSDIVQIEKD VEQIVLLDDE EQEAVLDKTE SETPVVVTTK SLVGNRNSSD ASLPITPFRS DEIKNRQARI EISMKDNCNN GDHSANGGTE SGLEHCVKII
601: RQLECSGHID KNFRQKFLTW YSLRATSQEI RVVKIFIDTF IDDPMALAEQ LIDTFDDRVS IKRSAVGGSG ASAVVPSGFC MKLWH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.