Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80080 | Sorghum | cytosol | 69.37 | 68.71 |
| Zm00001d024318_P009 | Maize | plasma membrane | 68.41 | 64.14 |
| Zm00001d049370_P002 | Maize | mitochondrion | 68.73 | 63.49 |
| VIT_18s0001g07650.t01 | Wine grape | cytosol | 40.32 | 46.44 |
| GSMUA_Achr8P33580_001 | Banana | plasma membrane | 47.94 | 45.01 |
| KRH16856 | Soybean | nucleus | 39.84 | 40.03 |
| KRH72469 | Soybean | nucleus | 37.62 | 38.92 |
| PGSC0003DMT400024218 | Potato | cytosol | 36.35 | 38.49 |
| Solyc04g076400.2.1 | Tomato | cytosol | 36.19 | 37.38 |
| Os02t0152500-01 | Rice | nucleus | 35.24 | 29.64 |
| Os05t0145400-01 | Rice | cytosol | 27.94 | 29.0 |
| Os12t0533500-01 | Rice | nucleus | 30.79 | 27.44 |
Protein Annotations
| MapMan:12.3.3.1.2.2 | EntrezGene:4344961 | EMBL:AK105274 | ProteinID:BAD03519.1 | ProteinID:BAF23182.1 | ProteinID:BAT04368.1 |
| ProteinID:EEE68247.1 | InterPro:FN3_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:Oberon_PHD |
| EnsemblPlantsGene:Os08g0220600 | EnsemblPlants:Os08t0220600-01 | PFAM:PF07227 | PANTHER:PTHR21736 | PANTHER:PTHR21736:SF34 | UniProt:Q6Z2D6 |
| SUPFAM:SSF49265 | UniParc:UPI0000226142 | RefSeq:XP_015650135.1 | RefSeq:XP_015650136.1 | RefSeq:XP_015650137.1 | RefSeq:XP_015650139.1 |
| RefSeq:XP_015650140.1 | SEG:seg | : | : | : | : |
Description
VIN3-LIKE 4, VERNALIZATION INSENSITIVE 3-LIKE 1Fibronectin, type III domain containing protein. (Os08t0220600-01);Hypothetical conserved gene. (Os08t0220600-02);Hypothetical conserved gene. (Os08t0220600-03)
Coordinates
chr8:-:7339066..7348077
Molecular Weight (calculated)
70733.8 Da
IEP (calculated)
7.526
GRAVY (calculated)
-0.532
Length
630 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPGKHNGMS LKDRRELVYE VSQWPQGASE ILQCWTRRDL LELICAELGK ERKYTNVPKS KMIAYLLKLV LRKNGQPKDD NANASILGQN NKDDTEKKEN
101: EEQPHHFSRS AKSDSSMCRE AQAGSTAVCR NVACQATLNS GDAYCKRCSC CICHKYDENK DPSLWLVCSS DTPYSGYSCG TSCHLKCALK NKKAGIFKNG
201: CNKKSDGSFY CVWCGKMNWL MRNLRKQLAI ARESRRVDVL CERLSLTHKM VKGSERYREL ANIINSAVKI LEKEVGCALD QVSAITGRGI VNRLCCGADV
301: QKLCSCALEM VDSTLSSTLD FETNNNLEAP GPQPQVFFVE ITPFSVLVVL KYQDNIAEEI DGCKVWHRSA NMANYPAEPT CHVLRPNTRS LFSGLSPSTE
401: YFFKVLPFGC SQGYGEWEVK CSTRSLNHGS SQCSTQNSES MSIKEDLEQH QKNELNLKNK QWWGIQYDSP SANSNENDVC PDLHPKRAKL AKLDGASDND
501: ESQLLPTSEV LPFMSSNSSL SEVPSKPDWV SSTPDSACKN HVERQYEYSV KVIRWLEHEG HMDKDFRVKF LTWFSLKASA QERRIVNAFV DALVSDPASL
601: VAQLIDSFME VVCSKEKPAQ PNGGCCNLWH
101: EEQPHHFSRS AKSDSSMCRE AQAGSTAVCR NVACQATLNS GDAYCKRCSC CICHKYDENK DPSLWLVCSS DTPYSGYSCG TSCHLKCALK NKKAGIFKNG
201: CNKKSDGSFY CVWCGKMNWL MRNLRKQLAI ARESRRVDVL CERLSLTHKM VKGSERYREL ANIINSAVKI LEKEVGCALD QVSAITGRGI VNRLCCGADV
301: QKLCSCALEM VDSTLSSTLD FETNNNLEAP GPQPQVFFVE ITPFSVLVVL KYQDNIAEEI DGCKVWHRSA NMANYPAEPT CHVLRPNTRS LFSGLSPSTE
401: YFFKVLPFGC SQGYGEWEVK CSTRSLNHGS SQCSTQNSES MSIKEDLEQH QKNELNLKNK QWWGIQYDSP SANSNENDVC PDLHPKRAKL AKLDGASDND
501: ESQLLPTSEV LPFMSSNSSL SEVPSKPDWV SSTPDSACKN HVERQYEYSV KVIRWLEHEG HMDKDFRVKF LTWFSLKASA QERRIVNAFV DALVSDPASL
601: VAQLIDSFME VVCSKEKPAQ PNGGCCNLWH
001: MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.