Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16856 | Soybean | nucleus | 89.49 | 86.92 |
| VIT_18s0001g07650.t01 | Wine grape | cytosol | 51.4 | 57.22 |
| PGSC0003DMT400024218 | Potato | cytosol | 41.71 | 42.69 |
| Solyc04g076400.2.1 | Tomato | cytosol | 41.38 | 41.31 |
| OQU80080 | Sorghum | cytosol | 40.07 | 38.36 |
| Os08t0220600-01 | Rice | cytosol | 38.92 | 37.62 |
| Zm00001d024318_P009 | Maize | plasma membrane | 40.56 | 36.76 |
| Zm00001d049370_P002 | Maize | mitochondrion | 40.89 | 36.51 |
| GSMUA_Achr8P33580_001 | Banana | plasma membrane | 39.9 | 36.21 |
| KRH19033 | Soybean | nucleus | 40.23 | 33.29 |
| KRH02856 | Soybean | nucleus | 40.23 | 33.24 |
| KRH39246 | Soybean | nucleus, plastid | 26.6 | 24.88 |
| KRH48444 | Soybean | nucleus | 28.9 | 24.48 |
| KRH41601 | Soybean | nucleus, plastid | 25.94 | 24.23 |
| KRH60306 | Soybean | nucleus | 27.75 | 23.44 |
Protein Annotations
| EMBL:ACUP02001213 | EnsemblPlants:KRH72469 | EnsemblPlantsGene:GLYMA_02G215000 | InterPro:Oberon_PHD | PANTHER:PTHR21736 | PANTHER:PTHR21736:SF24 |
| PFAM:PF07227 | ProteinID:KRH72469 | ProteinID:KRH72469.1 | UniParc:UPI0006ED6422 | UniProt:A0A0R0L7D8 | MapMan:12.3.3.1.2.2 |
Description
hypothetical protein
Coordinates
chr2:+:40110474..40115137
Molecular Weight (calculated)
68814.8 Da
IEP (calculated)
8.258
GRAVY (calculated)
-0.384
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEEENKGCA FLGTNSTYSG FLLDPSKCDM LSLPDKQRLV HEIARQSKDA SSMLQSFTRR ELLEIICAEL GKERKYTGYT KSQMIEHLLK IISKNSNLHI
101: NGNTPPQSPA KSCIGTKRKK KPATQDLHHA PLGNSKETVK TFLCQNVACK AKLNPEDSFC KRCSCCICHH YDDNKDPSLW LTCSSDLPNE ESCGMSCHLQ
201: CALSNQMSGI LKGSCGGVKL DGTFCCVSCG KINELMKTWR KQLLVAKEAR RTDILSLRLS LAHRILLGTE VYKEVQKIVE LLSNYWRMKL SCGAEVQRLC
301: TTALECFDSK FSVLFSICLE NKDAPTCSIR FEECLPTSVV IVLEYKDKLL QNFLGCRLWH RLSTMDYPEQ PTFIVLRPEK RFKLENLHPS TEYFCKASLF
401: SSTGILGAAE ATWVTPCEPT NPSKVINCGG NRFRWSPQRP SGTGVNMCAQ NRITAEIHPT ESANSEMKLS SGEHPGKKHI ILNIRSRFEE FLSKPQPVEP
501: FSYKNLAAVS PSTPSKSYEM RQIPGLNSRK FSKENDYEYS VRVVKWLEHQ GHIDEIFRVR FLTWFSLKAT QQERRVVSAF VDALIDDPAS LADQLIHTFS
601: DEICCEPKS
101: NGNTPPQSPA KSCIGTKRKK KPATQDLHHA PLGNSKETVK TFLCQNVACK AKLNPEDSFC KRCSCCICHH YDDNKDPSLW LTCSSDLPNE ESCGMSCHLQ
201: CALSNQMSGI LKGSCGGVKL DGTFCCVSCG KINELMKTWR KQLLVAKEAR RTDILSLRLS LAHRILLGTE VYKEVQKIVE LLSNYWRMKL SCGAEVQRLC
301: TTALECFDSK FSVLFSICLE NKDAPTCSIR FEECLPTSVV IVLEYKDKLL QNFLGCRLWH RLSTMDYPEQ PTFIVLRPEK RFKLENLHPS TEYFCKASLF
401: SSTGILGAAE ATWVTPCEPT NPSKVINCGG NRFRWSPQRP SGTGVNMCAQ NRITAEIHPT ESANSEMKLS SGEHPGKKHI ILNIRSRFEE FLSKPQPVEP
501: FSYKNLAAVS PSTPSKSYEM RQIPGLNSRK FSKENDYEYS VRVVKWLEHQ GHIDEIFRVR FLTWFSLKAT QQERRVVSAF VDALIDDPAS LADQLIHTFS
601: DEICCEPKS
001: MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.