Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80080 | Sorghum | cytosol | 82.29 | 86.95 |
| Zm00001d049370_P002 | Maize | mitochondrion | 85.86 | 84.6 |
| Os08t0220600-01 | Rice | cytosol | 64.14 | 68.41 |
| VIT_18s0001g07650.t01 | Wine grape | cytosol | 37.65 | 46.25 |
| GSMUA_Achr8P33580_001 | Banana | plasma membrane | 42.86 | 42.92 |
| KRH16856 | Soybean | nucleus | 39.43 | 42.26 |
| KRH72469 | Soybean | nucleus | 36.76 | 40.56 |
| PGSC0003DMT400024218 | Potato | cytosol | 34.08 | 38.49 |
| Solyc04g076400.2.1 | Tomato | cytosol | 33.63 | 37.05 |
| Zm00001d053875_P001 | Maize | cytosol, plastid | 34.08 | 30.13 |
| Zm00001d015293_P015 | Maize | nucleus, plastid | 34.52 | 27.46 |
| Zm00001d041715_P003 | Maize | nucleus | 27.68 | 26.69 |
| Zm00001d023897_P003 | Maize | cytosol | 27.68 | 25.83 |
| Zm00001d024824_P001 | Maize | cytosol | 17.56 | 25.05 |
Protein Annotations
| EnsemblPlants:Zm00001d024318_P009 | EnsemblPlants:Zm00001d024318_T009 | EnsemblPlantsGene:Zm00001d024318 | EntrezGene:100274676 | InterPro:Oberon_PHD | ncoils:Coil |
| PANTHER:PTHR21736 | PANTHER:PTHR21736:SF34 | PFAM:PF07227 | ProteinID:AQK41021.1 | SEG:seg | UniParc:UPI0008434D1E |
| UniProt:A0A1D6IYS5 | MapMan:12.3.3.1.2.2 | : | : | : | : |
Description
VIN3-like protein 2
Coordinates
chr10:+:64147286..64156243
Molecular Weight (calculated)
74991.3 Da
IEP (calculated)
7.675
GRAVY (calculated)
-0.412
Length
672 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPHFLVCCA GKPTLAEVTS GSIVQPCGFC LAGIVMDPEK QNEMSLMDKR QLVYEVARWP QGAVEILKCW TRRELLELIC VELGKERKYT NVPKAKMIAY
101: LLKLVSRKSG KNGQLKDDNA NVMLLEQDNK DETQMKESEE QEQSRPLKTA NSDSSIRREA HACCSVVCSN VACQATRNAG DNYCKRCSCC ICNKYDDNKD
201: PSLWLVCSSD NPYSGCSCGV SCHLNCALKN KKAGIVNNGC NKLDCSFYCV SCGKINWLMR SLQKQLAIAR EARRVDVLCE RLSLSHKMVK GSERYKEITS
301: IISSAAKTLE KEVGGALDQV SAITGRGIVN RLTCGAEVQK LCSSALEIVD STVDSILEFE SNNSPKLLGP QPQILFDEIT PFSVVIVLNY QDSIGKEQVD
401: GSKVWHRSAK VCNYSSEPTC HILRPNTRSL VSGLSPSTEY FFKVLPFSSV QGFTEWEAKC STRSLDHGSS QCSTQNSESM CLKVDPMQHQ KKDLNVQNHQ
501: RTIQYDSPKG STNSSENNLL CDRYSKRAKV ARLDGASDND ESQLPPTSEV LPFASSNYSP SEAPSKPDLL IGTPDSASKN YVEQQYEYCV KVVRWLEHEG
601: HMDNDFRVKF LTWFSLKATA QDRRIVGALV DVLIGDPASL VAQLVDAFKD IIYTKEKPFQ TQQKDARCKI WH
101: LLKLVSRKSG KNGQLKDDNA NVMLLEQDNK DETQMKESEE QEQSRPLKTA NSDSSIRREA HACCSVVCSN VACQATRNAG DNYCKRCSCC ICNKYDDNKD
201: PSLWLVCSSD NPYSGCSCGV SCHLNCALKN KKAGIVNNGC NKLDCSFYCV SCGKINWLMR SLQKQLAIAR EARRVDVLCE RLSLSHKMVK GSERYKEITS
301: IISSAAKTLE KEVGGALDQV SAITGRGIVN RLTCGAEVQK LCSSALEIVD STVDSILEFE SNNSPKLLGP QPQILFDEIT PFSVVIVLNY QDSIGKEQVD
401: GSKVWHRSAK VCNYSSEPTC HILRPNTRSL VSGLSPSTEY FFKVLPFSSV QGFTEWEAKC STRSLDHGSS QCSTQNSESM CLKVDPMQHQ KKDLNVQNHQ
501: RTIQYDSPKG STNSSENNLL CDRYSKRAKV ARLDGASDND ESQLPPTSEV LPFASSNYSP SEAPSKPDLL IGTPDSASKN YVEQQYEYCV KVVRWLEHEG
601: HMDNDFRVKF LTWFSLKATA QDRRIVGALV DVLIGDPASL VAQLVDAFKD IIYTKEKPFQ TQQKDARCKI WH
001: MSVDEKRQLV YELSKQSHLA AEVLQAWSRQ EILQILCAEM GKERKYTGLT KVKIIETLLK IVSEKNSGEC EGKKRDSDCL PIQRNTKRQR KVDNPSRYVI
101: PATNIVTSNN ASGSCSSVNT KGESTTIYCK NLACRAVLRQ EDSFCRRCSC CICRKYDDNK DPSLWLTCSS DPPFEGESCG FSCHLECAFN TEKSGLGKDK
201: QSEGCCFYCV SCGKANSLLE CWKKQLTIAK ETRRVEVLCY RLFLVQKLLK SSTKYRNLCE VVDEAVKTLE ADVGPLTGLP MKMGRGIVNR LHSGPDVQKL
301: CSSALESLET IATTPPDVAA LPSPRSSKMQ QDTATTGSTK IRFEDVNATS LTVVLASNEI PSPPNIVHYS IWHRKVPEKD YPEKSTCTLF IPNTRFVVSG
401: LAPASEYCFK VVSYSGTREM GVDEINVLTR SAEEGANCSS AVERSVSPLT NCSTLSSNPS SVEAESNNDY IVPKKPSSKN EDNNSPSVDE SAAKRMKRTT
501: DSDIVQIEKD VEQIVLLDDE EQEAVLDKTE SETPVVVTTK SLVGNRNSSD ASLPITPFRS DEIKNRQARI EISMKDNCNN GDHSANGGTE SGLEHCVKII
601: RQLECSGHID KNFRQKFLTW YSLRATSQEI RVVKIFIDTF IDDPMALAEQ LIDTFDDRVS IKRSAVGGSG ASAVVPSGFC MKLWH
101: PATNIVTSNN ASGSCSSVNT KGESTTIYCK NLACRAVLRQ EDSFCRRCSC CICRKYDDNK DPSLWLTCSS DPPFEGESCG FSCHLECAFN TEKSGLGKDK
201: QSEGCCFYCV SCGKANSLLE CWKKQLTIAK ETRRVEVLCY RLFLVQKLLK SSTKYRNLCE VVDEAVKTLE ADVGPLTGLP MKMGRGIVNR LHSGPDVQKL
301: CSSALESLET IATTPPDVAA LPSPRSSKMQ QDTATTGSTK IRFEDVNATS LTVVLASNEI PSPPNIVHYS IWHRKVPEKD YPEKSTCTLF IPNTRFVVSG
401: LAPASEYCFK VVSYSGTREM GVDEINVLTR SAEEGANCSS AVERSVSPLT NCSTLSSNPS SVEAESNNDY IVPKKPSSKN EDNNSPSVDE SAAKRMKRTT
501: DSDIVQIEKD VEQIVLLDDE EQEAVLDKTE SETPVVVTTK SLVGNRNSSD ASLPITPFRS DEIKNRQARI EISMKDNCNN GDHSANGGTE SGLEHCVKII
601: RQLECSGHID KNFRQKFLTW YSLRATSQEI RVVKIFIDTF IDDPMALAEQ LIDTFDDRVS IKRSAVGGSG ASAVVPSGFC MKLWH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.