Factsheet for Zm00001d053875_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015293_P015	Maize	nucleus, plastid	86.05	77.4
Os02t0152500-01	Rice	nucleus	68.68	69.69
HORVU6Hr1G022770.6	Barley	cytosol, nucleus, plastid	60.53	61.25
TraesCS6D01G113600.1	Wheat	nucleus	60.13	60.93
TraesCS6B01G151600.2	Wheat	nucleus	60.0	60.8
TraesCS6A01G123400.1	Wheat	nucleus	59.74	60.53
GSMUA_Achr4P02170_001	Banana	cytosol	43.42	50.23
GSMUA_Achr3P05080_001	Banana	cytosol	41.84	49.69
GSMUA_Achr5P16400_001	Banana	cytosol	35.66	46.97
GSMUA_Achr9P13690_001	Banana	plasma membrane	40.13	45.93
CDY29247	Canola	cytosol, nucleus, plastid	22.24	42.78
CDY59604	Canola	nucleus	22.63	42.47
CDY14184	Canola	cytosol	28.42	42.44
CDY51654	Canola	cytosol	29.34	41.53
Bra024456.1-P	Field mustard	nucleus	23.03	40.6
CDX68633	Canola	nucleus	31.97	39.13
Bra011173.1-P	Field mustard	nucleus	32.5	38.59
CDY03544	Canola	nucleus	31.58	38.46
CDY28168	Canola	nucleus	32.11	38.12
Bra010297.1-P	Field mustard	nucleus	31.97	37.97
VIT_11s0052g00830.t01	Wine grape	nucleus	36.84	37.94
CDX72220	Canola	nucleus	31.18	37.92
Bra024097.1-P	Field mustard	cytosol	31.18	37.09
KRH19033	Soybean	nucleus	35.66	36.82
KRH02856	Soybean	nucleus	35.66	36.77
Bra006824.1-P	Field mustard	nucleus	23.55	36.68
CDY11872	Canola	mitochondrion	26.58	35.5
AT5G57380.1	Thale cress	nucleus	28.82	35.32
Solyc07g018270.2.1	Tomato	cytosol	34.34	35.32
CDY42262	Canola	nucleus	26.05	35.17
Bra020445.1-P	Field mustard	nucleus	25.66	34.88
AT4G30200.2	Thale cress	nucleus	32.76	34.87
CDX88618	Canola	mitochondrion	26.45	34.54
CDY47942	Canola	nucleus	25.53	34.46
Zm00001d024318_P009	Maize	plasma membrane	30.13	34.08
Zm00001d049370_P002	Maize	mitochondrion	30.53	34.02
AT2G18880.1	Thale cress	nucleus	23.42	33.65
Zm00001d024824_P001	Maize	cytosol	18.82	30.36
Zm00001d041715_P003	Maize	nucleus	27.76	30.27
Zm00001d023897_P003	Maize	cytosol	28.42	30.0
PGSC0003DMT400019884	Potato	cytosol	14.08	29.0

Protein Annotations

EnsemblPlants:Zm00001d053875_P001	EnsemblPlants:Zm00001d053875_T001	EnsemblPlantsGene:Zm00001d053875	EntrezGene:100502265	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:FN3_dom	InterPro:FN3_sf	InterPro:IPR003961	InterPro:Oberon_PHD	PANTHER:PTHR21736
PANTHER:PTHR21736:SF24	PFAM:PF07227	ProteinID:AQK60594.1	SEG:seg	SUPFAM:SSF49265	UniParc:UPI000843BF4E
UniProt:A0A1D6QT22	MapMan:12.3.3.1.2.2	:	:	:	:

Description

VIN3-like protein 2

Coordinates

chr4:+:242702075..242707311

Molecular Weight (calculated)

84432.1 Da

IEP (calculated)

7.626

GRAVY (calculated)

-0.525

Length

760 amino acids

Sequence
(BLAST)

001: MPAAPVTSGP VIDPAKCRLM SVDEKRELVR DLSKSPESAP DRLQSWTRRE IVEILCSDLG RERKYTGLSK QRMLDYLFRL VSGKSSGPVE HVQEKEKGRE
101: KGKEREKESI PEPNTTNHHQ SPAKRPRKSD NPSRLPIITN NSAASDVTGP TNNSRFCQNV ACRAILRDNF CRRCSCCICF SYDDNKDPSL WLSCSSDQHL
201: QKDTCGFSCH LECALKDERT GILQSGQCKK LDGGYYCTRC WKQNDLLGSW KKQLVIAKDA RRLDVLCHRI YLSHKILVST EKYLVLHEIV DTALKKLEAE
301: VGPISGAPNM SRGIVSRLTV GAEVQKLCAQ AIDAMESLFS GVSPAGSRIP RPCMVPPNFV KFEAITQTSV MVFLDLVHYP MLAQEATSFN IWHRMAVTEA
401: YLTNPTGIIL PPSKKLPVTG LAPATSYIFK IIAFKNSIEL GSWEIRTKTS YQKDDPRGSM PGGTRLGHNS ESLKANSDGQ SDPSSEGVDS NNNTAVYADL
501: NKSPESDFEY CENPEILDSD KASRRLSEHI DDLQNIQMAA DRVTEVTELE ESPGLSASAL DEEPNACVQA VLLREPNPLG HNQRTVVPRS QHASNVLGGN
601: ELVIVGPRYA GSVPPIATRG LENSKESGGR GFKPKPCNNI FQNGSSKPER EPGNSSNKRT AGKTEDLGHK DSSSEVSYEY CVRVVRWLEC EGYIETNFRV
701: KFLTWFSLRA TPQERKIVGV YVDTLIEDPV SLSGQLVDSF SEAVYSKKRT PSGFCMDLWH

Best Arabidopsis Sequence Match ( AT4G30200.1 )
(BLAST)

001: MSVDEKRQLV YELSKQSHLA AEVLQAWSRQ EILQILCAEM GKERKYTGLT KVKIIETLLK IVSEKNSGEC EGKKRDSDCL PIQRNTKRQR KVDNPSRYVI
101: PATNIVTSNN ASGSCSSVNT KGESTTIYCK NLACRAVLRQ EDSFCRRCSC CICRKYDDNK DPSLWLTCSS DPPFEGESCG FSCHLECAFN TEKSGLGKDK
201: QSEGCCFYCV SCGKANSLLE CWKKQLTIAK ETRRVEVLCY RLFLVQKLLK SSTKYRNLCE VVDEAVKTLE ADVGPLTGLP MKMGRGIVNR LHSGPDVQKL
301: CSSALESLET IATTPPDVAA LPSPRSSKMQ QDTATTGSTK IRFEDVNATS LTVVLASNEI PSPPNIVHYS IWHRKVPEKD YPEKSTCTLF IPNTRFVVSG
401: LAPASEYCFK VVSYSGTREM GVDEINVLTR SAEEGANCSS AVERSVSPLT NCSTLSSNPS SVEAESNNDY IVPKKPSSKN EDNNSPSVDE SAAKRMKRTT
501: DSDIVQIEKD VEQIVLLDDE EQEAVLDKTE SETPVVVTTK SLVGNRNSSD ASLPITPFRS DEIKNRQARI EISMKDNCNN GDHSANGGTE SGLEHCVKII
601: RQLECSGHID KNFRQKFLTW YSLRATSQEI RVVKIFIDTF IDDPMALAEQ LIDTFDDRVS IKRSAVGGSG ASAVVPSGFC MKLWH

Arabidopsis Description

VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.