Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024097.1-P | Field mustard | cytosol | 98.7 | 82.94 |
| CDX72220 | Canola | nucleus | 93.67 | 80.48 |
| CDY14184 | Canola | cytosol | 70.2 | 74.07 |
| CDY03544 | Canola | nucleus | 75.61 | 65.06 |
| CDY28168 | Canola | nucleus | 77.09 | 64.69 |
| CDX68633 | Canola | nucleus | 74.49 | 64.41 |
| CDY29247 | Canola | cytosol, nucleus, plastid | 41.53 | 56.46 |
| AT4G30200.2 | Thale cress | nucleus | 73.37 | 55.18 |
| CDY59604 | Canola | nucleus | 41.53 | 55.06 |
| VIT_11s0052g00830.t01 | Wine grape | nucleus | 55.12 | 40.11 |
| KRH02856 | Soybean | nucleus | 54.93 | 40.03 |
| KRH19033 | Soybean | nucleus | 54.38 | 39.67 |
| CDY47942 | Canola | nucleus | 40.6 | 38.72 |
| Solyc07g018270.2.1 | Tomato | cytosol | 53.07 | 38.57 |
| CDY42262 | Canola | nucleus | 39.66 | 37.83 |
| CDY11872 | Canola | mitochondrion | 37.8 | 35.68 |
| CDX88618 | Canola | mitochondrion | 38.36 | 35.4 |
| GSMUA_Achr3P05080_001 | Banana | cytosol | 41.71 | 35.0 |
| GSMUA_Achr9P13690_001 | Banana | plasma membrane | 43.02 | 34.79 |
| GSMUA_Achr5P16400_001 | Banana | cytosol | 37.24 | 34.66 |
| GSMUA_Achr4P02170_001 | Banana | cytosol | 41.9 | 34.25 |
| CDX77426 | Canola | cytosol | 20.11 | 31.86 |
| Os02t0152500-01 | Rice | nucleus | 41.15 | 29.51 |
| Zm00001d053875_P001 | Maize | cytosol, plastid | 41.53 | 29.34 |
| KXG29488 | Sorghum | nucleus | 40.78 | 28.78 |
| HORVU6Hr1G022770.6 | Barley | cytosol, nucleus, plastid | 39.66 | 28.36 |
| TraesCS6A01G123400.1 | Wheat | nucleus | 39.48 | 28.27 |
| TraesCS6D01G113600.1 | Wheat | nucleus | 39.29 | 28.13 |
| TraesCS6B01G151600.2 | Wheat | nucleus | 39.11 | 28.0 |
| CDX77427 | Canola | nucleus | 30.35 | 27.39 |
| PGSC0003DMT400019884 | Potato | cytosol | 18.81 | 27.37 |
| Zm00001d015293_P015 | Maize | nucleus, plastid | 41.34 | 26.27 |
| HORVU7Hr1G099250.1 | Barley | cytosol | 39.48 | 26.17 |
| TraesCS7D01G424600.1 | Wheat | cytosol, nucleus, plasma membrane | 39.48 | 25.85 |
| CDY39555 | Canola | nucleus | 30.73 | 25.5 |
| TraesCS7A01G433000.1 | Wheat | cytosol | 38.73 | 25.43 |
Protein Annotations
| MapMan:12.3.3.1.2.2 | Gene3D:2.60.40.10 | UniProt:A0A078IQI3 | EnsemblPlants:CDY51654 | ProteinID:CDY51654 | ProteinID:CDY51654.1 |
| InterPro:FN3_dom | InterPro:FN3_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00003986001 |
| InterPro:IPR003961 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Oberon_PHD | PFAM:PF00041 | PFAM:PF07227 |
| PFscan:PS50853 | PANTHER:PTHR21736 | PANTHER:PTHR21736:SF13 | SMART:SM00060 | SUPFAM:SSF49265 | UniParc:UPI0004EDF933 |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng10940DBnaAnng10940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQI3]
Coordinates
chrLK033016:-:68931..71936
Molecular Weight (calculated)
59270.7 Da
IEP (calculated)
7.447
GRAVY (calculated)
-0.299
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSVDGAAG DSSKSSGMSV EEKIHLVYEL SAQPHLATEV LQAWSRKDIL QILCAEMGKE RKYTGLTKVK LIETLLKTIS KKNSGDHDGN KRGSSDSLPL
101: HRNSKRPRKV DNPTRYVVPT ISNASVSCNN LACRAVMGQG DSFCRRCSCC ICLKYDDNKD PSLWLTCSSD PPFEGDSCGF SCHLECAFKS EKSGLARDKE
201: GEEECCFYCV SCGKPNSLLE CWKKQLTIAK ETRRVDVLSY RLLLVQKLIK GSTKFSNVCE VVDEAVKSLE ADVGPLSGLP MKMGRGIVNR LGSGPDVQKL
301: CSSALESLQP LETKPSYDTA PTKIRFEDVN ATSLTVILAS NDLTSPANIV HYSIWHRKVT EKEYQEKSTC TLFTPNARFV VSGLAPASEY CFKVVSFSGT
401: REVGVDEINV LTRSSPEEVV ERSESPLTNC STLSSNPSSV EADGFKHCVS VIRQLESLGH IEKEFRQKFL TWYGLRATPQ EIRIVKIFID TFADDPVDLA
501: EQLVHTFNDR VLAKRCSAVG DGASAVVKSG FCMKLWH
101: HRNSKRPRKV DNPTRYVVPT ISNASVSCNN LACRAVMGQG DSFCRRCSCC ICLKYDDNKD PSLWLTCSSD PPFEGDSCGF SCHLECAFKS EKSGLARDKE
201: GEEECCFYCV SCGKPNSLLE CWKKQLTIAK ETRRVDVLSY RLLLVQKLIK GSTKFSNVCE VVDEAVKSLE ADVGPLSGLP MKMGRGIVNR LGSGPDVQKL
301: CSSALESLQP LETKPSYDTA PTKIRFEDVN ATSLTVILAS NDLTSPANIV HYSIWHRKVT EKEYQEKSTC TLFTPNARFV VSGLAPASEY CFKVVSFSGT
401: REVGVDEINV LTRSSPEEVV ERSESPLTNC STLSSNPSSV EADGFKHCVS VIRQLESLGH IEKEFRQKFL TWYGLRATPQ EIRIVKIFID TFADDPVDLA
501: EQLVHTFNDR VLAKRCSAVG DGASAVVKSG FCMKLWH
001: MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.