Factsheet for HORVU7Hr1G099250.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G424600.1	Wheat	cytosol, nucleus, plasma membrane	71.73	70.85
TraesCS7A01G433000.1	Wheat	cytosol	63.33	62.71
CDY29247	Canola	cytosol, nucleus, plastid	22.1	45.32
CDY59604	Canola	nucleus	22.22	44.44
HORVU6Hr1G022770.6	Barley	cytosol, nucleus, plastid	40.74	43.94
GSMUA_Achr3P05080_001	Banana	cytosol	34.69	43.91
GSMUA_Achr5P16400_001	Banana	cytosol	30.99	43.5
Bra024456.1-P	Field mustard	nucleus	22.47	42.23
GSMUA_Achr4P02170_001	Banana	cytosol	33.7	41.55
CDY14184	Canola	cytosol	25.56	40.67
CDY51654	Canola	cytosol	26.17	39.48
GSMUA_Achr9P13690_001	Banana	plasma membrane	31.98	39.01
Bra011173.1-P	Field mustard	nucleus	28.89	36.56
CDX72220	Canola	nucleus	28.15	36.48
CDY28168	Canola	nucleus	28.52	36.09
CDX68633	Canola	nucleus	27.65	36.07
CDY03544	Canola	nucleus	27.65	35.9
VIT_11s0052g00830.t01	Wine grape	nucleus	32.1	35.23
AT4G30200.2	Thale cress	nucleus	30.86	35.01
Bra010297.1-P	Field mustard	nucleus	27.65	35.0
Bra024097.1-P	Field mustard	cytosol	27.53	34.9
AT2G18880.1	Thale cress	nucleus	22.72	34.78
KRH19033	Soybean	nucleus	31.23	34.38
Bra006824.1-P	Field mustard	nucleus	20.62	34.22
KRH02856	Soybean	nucleus	31.11	34.19
Bra020445.1-P	Field mustard	nucleus	23.09	33.45
AT5G57380.1	Thale cress	nucleus	25.56	33.39
CDY42262	Canola	nucleus	23.09	33.21
CDY47942	Canola	nucleus	23.09	33.21
Solyc07g018270.2.1	Tomato	cytosol	30.0	32.88
CDY11872	Canola	mitochondrion	22.72	32.34
CDX88618	Canola	mitochondrion	23.09	32.13
HORVU1Hr1G019570.1	Barley	nucleus	22.1	29.15
HORVU5Hr1G026240.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.05	27.08
PGSC0003DMT400019884	Potato	cytosol	11.73	25.75
HORVU7Hr1G096840.1	Barley	plastid	23.58	25.13

Protein Annotations

EnsemblPlants:HORVU7Hr1G099250.1	EnsemblPlantsGene:HORVU7Hr1G099250	Gene3D:2.60.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:FN3_dom	InterPro:FN3_sf	InterPro:IPR003961	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Oberon_PHD
PANTHER:PTHR21736	PANTHER:PTHR21736:SF24	PFAM:PF07227	PFscan:PS50853	SEG:seg	SUPFAM:SSF49265
UniParc:UPI000294D8A7	UniProt:M0UMZ0	MapMan:12.3.3.1.2.2	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:600144632..600149791

Molecular Weight (calculated)

88485.6 Da

IEP (calculated)

6.961

GRAVY (calculated)

-0.455

Length

810 amino acids

Sequence
(BLAST)

001: MASSLYSGCI SDPDKCRLLS VDAKRELVLQ LSKCPHIALG LLHNWTSHDV KQILFSVFCR ERKYDGVSKK IMLKYLFQAV NGEPSGHGKR VSKSDPEQNS
101: STLQFPHKKQ RKNDATLLPV IASTPVTAGV TAPTNSACRN LACRASLNPA DKFCRRCSCC ICFKYDDNKD PSLWLSCNSD QPLQGESCGL SCHLECAFGD
201: ERSGIVQSGS SKKLDGAYYC VHCGRQNDLL GCWKKQLLIA KDARRSDVLC HRIFLSHKLL ISSKKYLVLH EFVDTALKKL EGELGPISGL EDKGQGIVGR
301: LVVGAEVQKL CNCAMETLES MLSGALTTES QSQSSCVVPS KFIKLEDISH ESVTVVFDLN ACPMLSQGLT GFNLWHREAS KEHYSSIPTG IVPVPSTMLV
401: VRGLAPRTSY VIKVVAFTNS KEIGSWEVRT NTINCPKEMD AKDSVPIYAR KDLINNTSTK TNSSGLSNPS SEDVESNNDN TTSANLSRSP ESDVEYWTSL
501: EKAPHRCNET DGDSRDLKTG VAGVTKVDVL EEAPRGSASA LDDNEEEPGS AAEAALPKRP SELMGYSREV LKQNLATICS EIASHEHTGN ESVSPPEYRG
601: SPPRVTQEGT ENCRGFSARC IEAKSDDHIL QDDGWKAETD PRSLSCKGTP GKCENSGHSD VPSEPHTSAQ APALWKPSNL PQRNKPDNAA GSPVPVTGSG
701: SKPNKDGRVP QPCPLKPGPE PGKPKDAECT DVDAYVYCVK VIRWLECEGY VEASFRVKFL TWLSLRATRQ EKRVVSVFVD TFIDDPASLA GQLIDTFSEM
801: IYGKRPPMAP

Best Arabidopsis Sequence Match ( AT4G30200.3 )
(BLAST)

001: MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH

Arabidopsis Description

VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.