Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G424600.1 | Wheat | cytosol, nucleus, plasma membrane | 73.72 | 73.54 |
| HORVU7Hr1G099250.1 | Barley | cytosol | 62.71 | 63.33 |
| CDY29247 | Canola | cytosol, nucleus, plastid | 22.0 | 45.57 |
| CDY59604 | Canola | nucleus | 22.25 | 44.94 |
| GSMUA_Achr5P16400_001 | Banana | cytosol | 31.05 | 44.02 |
| GSMUA_Achr3P05080_001 | Banana | cytosol | 34.35 | 43.91 |
| GSMUA_Achr4P02170_001 | Banana | cytosol | 34.35 | 42.77 |
| Bra024456.1-P | Field mustard | nucleus | 22.37 | 42.46 |
| TraesCS6A01G123400.1 | Wheat | nucleus | 38.51 | 42.0 |
| CDY14184 | Canola | cytosol | 25.18 | 40.47 |
| GSMUA_Achr9P13690_001 | Banana | plasma membrane | 32.76 | 40.36 |
| CDY51654 | Canola | cytosol | 25.43 | 38.73 |
| Bra006824.1-P | Field mustard | nucleus | 21.15 | 35.45 |
| CDY03544 | Canola | nucleus | 27.02 | 35.42 |
| AT5G57380.1 | Thale cress | nucleus | 26.53 | 35.0 |
| CDY28168 | Canola | nucleus | 27.26 | 34.84 |
| CDX68633 | Canola | nucleus | 26.41 | 34.78 |
| AT2G18880.1 | Thale cress | nucleus | 22.49 | 34.78 |
| CDX72220 | Canola | nucleus | 26.53 | 34.72 |
| Bra011173.1-P | Field mustard | nucleus | 27.14 | 34.69 |
| Bra010297.1-P | Field mustard | nucleus | 27.14 | 34.69 |
| KRH19033 | Soybean | nucleus | 31.05 | 34.51 |
| KRH02856 | Soybean | nucleus | 31.05 | 34.46 |
| CDY11872 | Canola | mitochondrion | 23.84 | 34.27 |
| VIT_11s0052g00830.t01 | Wine grape | nucleus | 30.56 | 33.88 |
| Bra024097.1-P | Field mustard | cytosol | 26.16 | 33.49 |
| AT4G30200.2 | Thale cress | nucleus | 29.22 | 33.47 |
| CDX88618 | Canola | mitochondrion | 23.72 | 33.33 |
| Bra020445.1-P | Field mustard | nucleus | 22.62 | 33.09 |
| CDY42262 | Canola | nucleus | 22.74 | 33.04 |
| CDY47942 | Canola | nucleus | 22.49 | 32.68 |
| Solyc07g018270.2.1 | Tomato | cytosol | 28.97 | 32.07 |
| TraesCS5A01G097100.1 | Wheat | nucleus | 25.06 | 29.41 |
| TraesCS1A01G108900.1 | Wheat | cytosol | 21.64 | 29.3 |
| PGSC0003DMT400019884 | Potato | cytosol | 11.0 | 24.39 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G433000.1 | EnsemblPlantsGene:TraesCS7A01G433000 | Gene3D:2.60.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:FN3_dom | InterPro:FN3_sf | InterPro:IPR003961 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Oberon_PHD |
| PANTHER:PTHR21736 | PANTHER:PTHR21736:SF24 | PFAM:PF07227 | PFscan:PS50853 | SEG:seg | SUPFAM:SSF49265 |
| TIGR:cd15521 | MapMan:12.3.3.1.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:626918738..626923441
Molecular Weight (calculated)
88316.8 Da
IEP (calculated)
6.269
GRAVY (calculated)
-0.496
Length
818 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSLYSGCI ADPDRCRLLS VDAKRELVLQ LSKCPHIALG LLHEWTSHDI KQILFSVLCR EKKYEGVSKK IMLKYLFQAV NGEPSGRGKR VSKSDPEQNS
101: STLQFSHKKL RKNDATLLPV IASTPVTAGV SAPTNSACQN SACRASLNPA DKFCRRCSCC ICFKYDDNKD PSLWLSCNSD QPLQGESCGL SCHLECALGD
201: ERSGILQSGQ SKKLDGSYHC IHCGKQNDLL GCWKKQLLIA KDARRSDVLC HRISLCHKLL ASTKKYLVLH EFVDTALKKL EGELGPITGL EDKGRGIVGR
301: LVVGAEVQKL CSCAIETLES MLSGALTAES QTRSSSVVPS NFIKLVDISH ESVTVVFDLD ACPMLSQGLT GFNLWHRKAS EEHYPSNPTG IVPTPSTMLV
401: VRGLAPCTCY VIKVVAFTNS KEIGSWEVRT NTINCPKEMD AKDSMPGDAG KDLNNTSAKT NSSGLSNPSS EDVESYNDSS TSTDLSRSPE SDVEYWTSLE
501: KAPHRRNEAA GDSRDLQTGV AGGTEVDKLE EAPRGSPSAL DDDDDEEEPS SAAEAALPKR PSELMVCSRE ALKQNLATIC SGIASQEHTG SESVAPPEHH
601: GSPPCVTQEG TENRKGVSAR SVQAKSDDHI PQDDSSKAET EDPGSLSCKG TPAGKSEGGG YNDDGPSEPH TSAQAPPLRK PSNLPQRREQ GVSPENAPGS
701: PVPVAGNGSK PKNDGRVPQP CPVKPVPEPG KPEDAARTDT DAYVYCVKVI RWLECEGYVE AGFRVKFLTW LSLRATRHEK RVVSVFVDAF IDDPASLAGQ
801: LSDTFSEAIY SKRPPMAP
101: STLQFSHKKL RKNDATLLPV IASTPVTAGV SAPTNSACQN SACRASLNPA DKFCRRCSCC ICFKYDDNKD PSLWLSCNSD QPLQGESCGL SCHLECALGD
201: ERSGILQSGQ SKKLDGSYHC IHCGKQNDLL GCWKKQLLIA KDARRSDVLC HRISLCHKLL ASTKKYLVLH EFVDTALKKL EGELGPITGL EDKGRGIVGR
301: LVVGAEVQKL CSCAIETLES MLSGALTAES QTRSSSVVPS NFIKLVDISH ESVTVVFDLD ACPMLSQGLT GFNLWHRKAS EEHYPSNPTG IVPTPSTMLV
401: VRGLAPCTCY VIKVVAFTNS KEIGSWEVRT NTINCPKEMD AKDSMPGDAG KDLNNTSAKT NSSGLSNPSS EDVESYNDSS TSTDLSRSPE SDVEYWTSLE
501: KAPHRRNEAA GDSRDLQTGV AGGTEVDKLE EAPRGSPSAL DDDDDEEEPS SAAEAALPKR PSELMVCSRE ALKQNLATIC SGIASQEHTG SESVAPPEHH
601: GSPPCVTQEG TENRKGVSAR SVQAKSDDHI PQDDSSKAET EDPGSLSCKG TPAGKSEGGG YNDDGPSEPH TSAQAPPLRK PSNLPQRREQ GVSPENAPGS
701: PVPVAGNGSK PKNDGRVPQP CPVKPVPEPG KPEDAARTDT DAYVYCVKVI RWLECEGYVE AGFRVKFLTW LSLRATRHEK RVVSVFVDAF IDDPASLAGQ
801: LSDTFSEAIY SKRPPMAP
001: MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
101: RNTKRQRKVD NPSRYVIPAT NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS LWLTCSSDPP FEGESCGFSC
201: HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301: GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE
401: KSTCTLFIPN TRFVVSGLAP ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE AESNNDYIVP KKPSSKNEDN
501: NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601: SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL
701: WH
Arabidopsis Description
VIL2VIN3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.