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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d013492_P001 Maize plasma membrane 85.39 74.64
KXG37779 Sorghum plasma membrane 64.2 66.95
TraesCSU01G131600.1 Wheat plasma membrane 58.23 58.11
TraesCS5A01G547500.1 Wheat plasma membrane 57.61 57.49
TraesCS4B01G381200.1 Wheat plasma membrane 57.2 57.08
TraesCSU01G131800.1 Wheat plasma membrane 54.53 55.56
HORVU4Hr1G090460.5 Barley plasma membrane 44.65 52.93
HORVU5Hr1G050310.2 Barley plasma membrane 26.75 52.42
Solyc09g005490.1.1 Tomato extracellular 7.41 28.35
KXG37781 Sorghum plasma membrane 66.67 26.21
TraesCS4A01G275600.1 Wheat plasma membrane 64.4 26.06
TraesCS2B01G133000.1 Wheat plasma membrane 63.58 25.75
TraesCS5A01G161200.4 Wheat plasma membrane 65.02 25.5
TraesCS5D01G166000.1 Wheat plasma membrane 65.02 25.48
TraesCS4D01G036000.3 Wheat plasma membrane 63.58 25.47
TraesCS5B01G158500.1 Wheat plasma membrane 64.81 25.42
Os03t0700800-01 Rice plasma membrane 65.02 24.33
TraesCS4B01G038100.1 Wheat plasma membrane 59.26 23.82
EES02232 Sorghum plasma membrane 58.64 22.41
HORVU5Hr1G050330.5 Barley plasma membrane 39.92 19.21
GSMUA_Achr9P10350_001 Banana plasma membrane 44.86 18.06
GSMUA_Achr6P31160_001 Banana plasma membrane 45.68 17.47
OQU88782 Sorghum cytosol, peroxisome, plasma membrane 19.14 17.38
EER96161 Sorghum cytosol, plasma membrane, vacuole 18.11 16.76
EER90213 Sorghum plastid 18.52 16.36
EER92665 Sorghum cytosol, peroxisome, plasma membrane 16.67 15.7
GSMUA_Achr7P01280_001 Banana plasma membrane 46.71 15.34
KXG38042 Sorghum cytosol, nucleus, plasma membrane 17.08 15.2
OQU83565 Sorghum cytosol, peroxisome, plasma membrane 17.28 14.71
KXG29392 Sorghum plasma membrane 16.46 14.63
CDX70318 Canola plasma membrane 34.57 14.02
EES17269 Sorghum cytosol, peroxisome, plasma membrane 15.64 13.97
CDY10393 Canola plasma membrane 34.36 13.96
VIT_08s0040g01730.t01 Wine grape plasma membrane 37.45 13.81
AT5G03280.1 Thale cress plasma membrane 35.39 13.29
Solyc09g007870.2.1 Tomato plastid 34.98 12.92
PGSC0003DMT400055484 Potato plasma membrane 34.57 12.91
Bra009539.1-P Field mustard plasma membrane 34.57 12.81
KRH67695 Soybean endoplasmic reticulum, plasma membrane, plastid 33.74 12.74
KRH19943 Soybean plasma membrane 34.36 12.72
KRH32544 Soybean plasma membrane 33.95 12.71
Solyc09g005540.1.1 Tomato cytosol, nucleus, vacuole 12.96 10.23
Protein Annotations
EnsemblPlants:OQU91151EnsemblPlantsGene:SORBI_3001G125400GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0030001GO:GO:0046873InterPro:NRAMP_fam
PANTHER:PTHR11706PANTHER:PTHR11706:SF44PFAM:PF01566PRINTS:PR00447ProteinID:OQU91151ProteinID:OQU91151.1
SEG:segTMHMM:TMhelixUniParc:UPI000B8BB193UniProt:A0A1Z5S5F1MapMan:11.5.2.3:
Description
hypothetical protein
Coordinates
chr1:-:9876249..9880835
Molecular Weight (calculated)
53064.3 Da
IEP (calculated)
6.455
GRAVY (calculated)
0.622
Length
486 amino acids
Sequence
(BLAST)
001: MNSMQSIESL AAGDAQHKLF RTLGPTLVIS MAYIDLGKWL VAVDAGSRFG YDLVLLVLLF NFSAILCQYL STRIGMVTGK NLAKICCQEY SQVICVVLGL
101: QAWLSLLTSE LTMDKKVAGI FNACIAGFTL LCFVLGLLIS HPHTPVNMNV MFPKLSGESA YSLMALLGTN IIVHNFYTHS AFVQVQRRSS VHTLGSLFHD
201: HLFSILFIFT GIFLVNYILL SSAADESSDT LVMNFQDAME QMHQIFTNPA APIVLLVILL FSSHIISLTC IVSGDVISEN FFGVKLPLSA HHLLHKGLAM
301: ILTIYCAKVA GSEGIYQLLI MCPVIQAMLL PSSIIPILRV SSSRLLMGRY RIALCVEIFA FLAFLLAVFT NIIFTAEILF GDSTWTNNLK GDTGSPAILP
401: YSVIVLASCA SIGFTLLLAV TPLKSASNEA QTHLSSVHSQ RETLGTTHRE ATCLEKNEDE EFESCSVGAF LMGSSEGHTE SVHEHT
Best Arabidopsis Sequence Match ( AT5G03280.1 )
(BLAST)
0001: MEAEIVNVRP QLGFIQRMVP ALLPVLLVSV GYIDPGKWVA NIEGGARFGY DLVAITLLFN FAAILCQYVA ARISVVTGKH LAQICNEEYD KWTCMFLGIQ
0101: AEFSAILLDL TMVVGVAHAL NLLFGVELST GVFLAAMDAF LFPVFASFLE NGMANTVSIY SAGLVLLLYV SGVLLSQSEI PLSMNGVLTR LNGESAFALM
0201: GLLGASIVPH NFYIHSYFAG ESTSSSDVDK SSLCQDHLFA IFGVFSGLSL VNYVLMNAAA NVFHSTGLVV LTFHDALSLM EQVFMSPLIP VVFLMLLFFS
0301: SQITALAWAF GGEVVLHDFL KIEIPAWLHR ATIRILAVAP ALYCVWTSGA DGIYQLLIFT QVLVAMMLPC SVIPLFRIAS SRQIMGVHKI PQVGEFLALT
0401: TFLGFLGLNV VFVVEMVFGS SDWAGGLRWN TVMGTSIQYT TLLVSSCASL CLILWLAATP LKSASNRAEA QIWNMDAQNA LSYPSVQEEE IERTETRRNE
0501: DESIVRLESR VKDQLDTTSV TSSVYDLPEN ILMTDQEIRS SPPEERELDV KYSTSQVSSL KEDSDVKEQS VLQSTVVNEV SDKDLIVETK MAKIEPMSPV
0601: EKIVSMENNS KFIEKDVEGV SWETEEATKA APTSNFTVGS DGPPSFRSLS GEGGSGTGSL SRLQGLGRAA RRHLSAILDE FWGHLYDFHG QLVAEARAKK
0701: LDQLFGTDQK SASSMKADSF GKDISSGYCM SPTAKGMDSQ MTSSLYDSLK QQRTPGSIDS LYGLQRGSSP SPLVNRMQML GAYGNTTNNN NAYELSERRY
0801: SSLRAPSSSE GWEHQQPATV HGYQMKSYVD NLAKERLEAL QSRGEIPTSR SMALGTLSYT QQLALALKQK SQNGLTPGPA PGFENFAGSR SISRQSERSY
0901: YGVPSSGNTD TVGAAVANEK KYSSMPDISG LSMSARNMHL PNNKSGYWDP SSGGGGYGAS YGRLSNESSL YSNLGSRVGV PSTYDDISQS RGGYRDAYSL
1001: PQSATTGTGS LWSRQPFEQF GVAERNGAVG EELRNRSNPI NIDNNASSNV DAEAKLLQSF RHCILKLIKL EGSEWLFGQS DGVDEELIDR VAAREKFIYE
1101: AEAREINQVG HMGEPLISSV PNCGDGCVWR ADLIVSFGVW CIHRVLDLSL MESRPELWGK YTYVLNRLQG VIDPAFSKLR TPMTPCFCLQ IPASHQRASP
1201: TSANGMLPPA AKPAKGKCTT AVTLLDLIKD VEMAISCRKG RTGTAAGDVA FPKGKENLAS VLKRYKRRLS NKPVGMNQDG PGSRKNVTAY GSLG
Arabidopsis Description
EIN2Ethylene-insensitive protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S814]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.