Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- plastid 1
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
26371478
|
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g056580.2.1 | |
| Solyc12g011330.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03280.1 | Solyc07g056580.2.1 | AT1G66340.1 | 19769567 |
| AT5G03280.1 | Solyc12g011330.2.1 | AT1G66340.1 | 19769567 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055484 | Potato | plasma membrane | 95.52 | 96.62 |
| Solyc09g005490.1.1 | Tomato | extracellular | 8.66 | 89.76 |
| Solyc09g005540.1.1 | Tomato | cytosol, nucleus, vacuole | 29.41 | 62.82 |
| VIT_08s0040g01730.t01 | Wine grape | plasma membrane | 59.88 | 59.79 |
| KRH19943 | Soybean | plasma membrane | 53.42 | 53.54 |
| KRH32544 | Soybean | plasma membrane | 52.58 | 53.31 |
| KRH67695 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 51.67 | 52.84 |
| AT5G03280.1 | Thale cress | plasma membrane | 48.86 | 49.69 |
| CDX70318 | Canola | plasma membrane | 45.14 | 49.58 |
| CDY10393 | Canola | plasma membrane | 44.98 | 49.5 |
| Bra009539.1-P | Field mustard | plasma membrane | 48.63 | 48.82 |
| TraesCSU01G131800.1 | Wheat | plasma membrane | 15.12 | 41.72 |
| TraesCSU01G131600.1 | Wheat | plasma membrane | 15.35 | 41.48 |
| TraesCS5A01G547500.1 | Wheat | plasma membrane | 15.35 | 41.48 |
| GSMUA_Achr9P10350_001 | Banana | plasma membrane | 37.77 | 41.18 |
| GSMUA_Achr6P31160_001 | Banana | plasma membrane | 38.98 | 40.36 |
| KXG37779 | Sorghum | plasma membrane | 14.29 | 40.34 |
| Zm00001d033625_P015 | Maize | plasma membrane | 14.59 | 40.34 |
| Os07t0156732-01 | Rice | nucleus | 18.39 | 40.13 |
| Os07t0157401-01 | Rice | nucleus | 18.39 | 40.13 |
| TraesCS4B01G381200.1 | Wheat | plasma membrane | 14.67 | 39.63 |
| HORVU5Hr1G050310.2 | Barley | plasma membrane | 7.45 | 39.52 |
| Os07t0155600-01 | Rice | cytosol, peroxisome, plasma membrane | 38.07 | 39.11 |
| EES02232 | Sorghum | plasma membrane | 37.77 | 39.07 |
| Zm00001d039341_P126 | Maize | plasma membrane | 37.84 | 38.34 |
| TraesCS4A01G275600.1 | Wheat | plasma membrane | 34.12 | 37.39 |
| TraesCS5D01G166000.1 | Wheat | plasma membrane | 35.18 | 37.34 |
| TraesCS2B01G133000.1 | Wheat | plasma membrane | 34.04 | 37.33 |
| TraesCS5B01G158500.1 | Wheat | plasma membrane | 35.03 | 37.21 |
| TraesCS5A01G161200.4 | Wheat | plasma membrane | 34.95 | 37.13 |
| TraesCS4D01G036000.3 | Wheat | plasma membrane | 33.74 | 36.6 |
| HORVU5Hr1G050330.5 | Barley | plasma membrane | 27.96 | 36.44 |
| Os03t0700800-01 | Rice | plasma membrane | 35.56 | 36.03 |
| TraesCS4B01G038100.1 | Wheat | plasma membrane | 33.05 | 35.98 |
| HORVU4Hr1G090460.5 | Barley | plasma membrane | 11.09 | 35.61 |
| KXG37781 | Sorghum | plasma membrane | 33.28 | 35.44 |
| GSMUA_Achr7P01280_001 | Banana | plasma membrane | 39.67 | 35.27 |
| OQU91151 | Sorghum | plasma membrane | 12.92 | 34.98 |
| Zm00001d013492_P001 | Maize | plasma membrane | 13.68 | 32.37 |
| Solyc11g018530.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 8.89 | 22.08 |
| Solyc03g116900.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 8.66 | 21.84 |
| Solyc02g092800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 7.67 | 19.84 |
| Solyc04g078250.2.1 | Tomato | cytosol, nucleus, plasma membrane | 7.22 | 18.3 |
| Solyc04g078230.1.1 | Tomato | cytosol, extracellular, plastid | 1.9 | 15.34 |
| Solyc04g078240.1.1 | Tomato | cytosol | 1.67 | 13.66 |
Protein Annotations
| MapMan:11.5.2.3 | ncoils:Coil | InterPro:EIN2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009873 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 |
| GO:GO:0046873 | UniProt:K4CQH6 | InterPro:NRAMP_fam | PFAM:PF01566 | PIRSF:PIRSF037378 | PRINTS:PR00447 |
| PANTHER:PTHR11706 | PANTHER:PTHR11706:SF44 | EnsemblPlantsGene:Solyc09g007870.2 | EnsemblPlants:Solyc09g007870.2.1 | TMHMM:TMhelix | UniParc:UPI000276BB00 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:1401117..1407730
Molecular Weight (calculated)
142682.0 Da
IEP (calculated)
6.417
GRAVY (calculated)
-0.013
Length
1316 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESETLTREY RQPSMLQRVL SASVPMLLIA VGYVDPGKWA AMVDGGARFG FDLVMLVLLF NFAAILCQYL SACIALVTDR DLAQICSEEY DKVTCIFLGI
0101: QAEVSMIALD LTMVLGTAHG LNVVFGVDLF SCVFLTATGA ILFPLLASLF DNGSAKFLCI GWASSVLLSY VFGVVITLPE TPFSIGGVLN KFSGESAFAL
0201: MSLLGASIMP HNFYLHSSIV QQGKESTELS RGALCQDHFF AIVFIFSGIF LVNYAAMNSA ANVSYSTGLL LLTFQDTLSL LDQVFRSSVA PFTIMLVTFI
0301: SNQVTPLTWD LGRQAVVHDL FGMDIPGWLH HVTIRVISIV PALYCVWSSG AEGLYQLLIL TQVVVALVLP SSVIPLFRVA SSRSIMGIHK ISQLMEFLSL
0401: GTFIGLLGLK IIFVIEMIFG NSDWVNNLKW NIGSSVSTPY VFLLIAASLC LCLMLWLAVT PLKSASSRFD AQAFLQTHVP EPYSECNQLG ASNAMFGLVE
0501: GSSQKQEGAF HVEKSLVTHP DLSTKDPDQL LPESLLDFEK VHQLATIDES KSETTFSAPA VVHPEVPVSA GASPSVKSVC NEVSGVVSVD TSVFNTETVD
0601: VAEKTLRIEG DMANDRDDGD SWEEPEEAIK GVSENAQSFI SDGPGSYKSL SGKLEDTGSG TGSLSRLAGL GRAARRQLTE ALNEFWGQLF DYHGMATAEA
0701: KSKKLDIILG LDSKMNPKPA PASLKVESSA YIPSGSARIP EPLINSHVYS PKQQFASNIV DSAYRVPKEP SSTSSMWSNH MKLVGAYVQS SNSNMLDSGE
0801: RRYSSMRIPA TSAGYDQQPA TVHGYQITAY LNQLAKERGS DYLNGQLESP SPRSVSSLTS NYAEPLARVS GQKPQSGVSS RAPPGFGNVP VGRNNSMQPT
0901: NTTSVDHSST ETAESVAGSA NSKKYYSLPD ISGRYVPRQD SIVSDARAQW YNSMGFGQSG GRSTYEQAYM SGSLRAGGPQ RYEHSPKVCR DAFSLQYSSN
1001: SGTGSLWSRQ PFEQFGVAGK PDVGSGDHGT VLSSSAQEST STVDLEAKLL QSFRSCIVKL LKLEGSEWLF RQDDGADEDL IGRIAAREKF LYEAETREIS
1101: RLTNIGESHF SSNRKPGSAP KPEEMDYTKF LVMSVPHCGE GCVWKVDLII SFGVWCIHRI LELSLMESRP ELWGKYTYVL NRLQGIVDLA FSKPHSPTSH
1201: CFCLQIPAGR QQKASPPPIS NGNLPPQAKQ GRGKCTTAAM LLEMIKDVET AISCRKGRTG TAAGDVAFPK GKENLASVLK RYKRRLSNKP VGNQEVAGVA
1301: GPRKVTLSAS SPPFVL
0101: QAEVSMIALD LTMVLGTAHG LNVVFGVDLF SCVFLTATGA ILFPLLASLF DNGSAKFLCI GWASSVLLSY VFGVVITLPE TPFSIGGVLN KFSGESAFAL
0201: MSLLGASIMP HNFYLHSSIV QQGKESTELS RGALCQDHFF AIVFIFSGIF LVNYAAMNSA ANVSYSTGLL LLTFQDTLSL LDQVFRSSVA PFTIMLVTFI
0301: SNQVTPLTWD LGRQAVVHDL FGMDIPGWLH HVTIRVISIV PALYCVWSSG AEGLYQLLIL TQVVVALVLP SSVIPLFRVA SSRSIMGIHK ISQLMEFLSL
0401: GTFIGLLGLK IIFVIEMIFG NSDWVNNLKW NIGSSVSTPY VFLLIAASLC LCLMLWLAVT PLKSASSRFD AQAFLQTHVP EPYSECNQLG ASNAMFGLVE
0501: GSSQKQEGAF HVEKSLVTHP DLSTKDPDQL LPESLLDFEK VHQLATIDES KSETTFSAPA VVHPEVPVSA GASPSVKSVC NEVSGVVSVD TSVFNTETVD
0601: VAEKTLRIEG DMANDRDDGD SWEEPEEAIK GVSENAQSFI SDGPGSYKSL SGKLEDTGSG TGSLSRLAGL GRAARRQLTE ALNEFWGQLF DYHGMATAEA
0701: KSKKLDIILG LDSKMNPKPA PASLKVESSA YIPSGSARIP EPLINSHVYS PKQQFASNIV DSAYRVPKEP SSTSSMWSNH MKLVGAYVQS SNSNMLDSGE
0801: RRYSSMRIPA TSAGYDQQPA TVHGYQITAY LNQLAKERGS DYLNGQLESP SPRSVSSLTS NYAEPLARVS GQKPQSGVSS RAPPGFGNVP VGRNNSMQPT
0901: NTTSVDHSST ETAESVAGSA NSKKYYSLPD ISGRYVPRQD SIVSDARAQW YNSMGFGQSG GRSTYEQAYM SGSLRAGGPQ RYEHSPKVCR DAFSLQYSSN
1001: SGTGSLWSRQ PFEQFGVAGK PDVGSGDHGT VLSSSAQEST STVDLEAKLL QSFRSCIVKL LKLEGSEWLF RQDDGADEDL IGRIAAREKF LYEAETREIS
1101: RLTNIGESHF SSNRKPGSAP KPEEMDYTKF LVMSVPHCGE GCVWKVDLII SFGVWCIHRI LELSLMESRP ELWGKYTYVL NRLQGIVDLA FSKPHSPTSH
1201: CFCLQIPAGR QQKASPPPIS NGNLPPQAKQ GRGKCTTAAM LLEMIKDVET AISCRKGRTG TAAGDVAFPK GKENLASVLK RYKRRLSNKP VGNQEVAGVA
1301: GPRKVTLSAS SPPFVL
0001: MEAEIVNVRP QLGFIQRMVP ALLPVLLVSV GYIDPGKWVA NIEGGARFGY DLVAITLLFN FAAILCQYVA ARISVVTGKH LAQICNEEYD KWTCMFLGIQ
0101: AEFSAILLDL TMVVGVAHAL NLLFGVELST GVFLAAMDAF LFPVFASFLE NGMANTVSIY SAGLVLLLYV SGVLLSQSEI PLSMNGVLTR LNGESAFALM
0201: GLLGASIVPH NFYIHSYFAG ESTSSSDVDK SSLCQDHLFA IFGVFSGLSL VNYVLMNAAA NVFHSTGLVV LTFHDALSLM EQVFMSPLIP VVFLMLLFFS
0301: SQITALAWAF GGEVVLHDFL KIEIPAWLHR ATIRILAVAP ALYCVWTSGA DGIYQLLIFT QVLVAMMLPC SVIPLFRIAS SRQIMGVHKI PQVGEFLALT
0401: TFLGFLGLNV VFVVEMVFGS SDWAGGLRWN TVMGTSIQYT TLLVSSCASL CLILWLAATP LKSASNRAEA QIWNMDAQNA LSYPSVQEEE IERTETRRNE
0501: DESIVRLESR VKDQLDTTSV TSSVYDLPEN ILMTDQEIRS SPPEERELDV KYSTSQVSSL KEDSDVKEQS VLQSTVVNEV SDKDLIVETK MAKIEPMSPV
0601: EKIVSMENNS KFIEKDVEGV SWETEEATKA APTSNFTVGS DGPPSFRSLS GEGGSGTGSL SRLQGLGRAA RRHLSAILDE FWGHLYDFHG QLVAEARAKK
0701: LDQLFGTDQK SASSMKADSF GKDISSGYCM SPTAKGMDSQ MTSSLYDSLK QQRTPGSIDS LYGLQRGSSP SPLVNRMQML GAYGNTTNNN NAYELSERRY
0801: SSLRAPSSSE GWEHQQPATV HGYQMKSYVD NLAKERLEAL QSRGEIPTSR SMALGTLSYT QQLALALKQK SQNGLTPGPA PGFENFAGSR SISRQSERSY
0901: YGVPSSGNTD TVGAAVANEK KYSSMPDISG LSMSARNMHL PNNKSGYWDP SSGGGGYGAS YGRLSNESSL YSNLGSRVGV PSTYDDISQS RGGYRDAYSL
1001: PQSATTGTGS LWSRQPFEQF GVAERNGAVG EELRNRSNPI NIDNNASSNV DAEAKLLQSF RHCILKLIKL EGSEWLFGQS DGVDEELIDR VAAREKFIYE
1101: AEAREINQVG HMGEPLISSV PNCGDGCVWR ADLIVSFGVW CIHRVLDLSL MESRPELWGK YTYVLNRLQG VIDPAFSKLR TPMTPCFCLQ IPASHQRASP
1201: TSANGMLPPA AKPAKGKCTT AVTLLDLIKD VEMAISCRKG RTGTAAGDVA FPKGKENLAS VLKRYKRRLS NKPVGMNQDG PGSRKNVTAY GSLG
0101: AEFSAILLDL TMVVGVAHAL NLLFGVELST GVFLAAMDAF LFPVFASFLE NGMANTVSIY SAGLVLLLYV SGVLLSQSEI PLSMNGVLTR LNGESAFALM
0201: GLLGASIVPH NFYIHSYFAG ESTSSSDVDK SSLCQDHLFA IFGVFSGLSL VNYVLMNAAA NVFHSTGLVV LTFHDALSLM EQVFMSPLIP VVFLMLLFFS
0301: SQITALAWAF GGEVVLHDFL KIEIPAWLHR ATIRILAVAP ALYCVWTSGA DGIYQLLIFT QVLVAMMLPC SVIPLFRIAS SRQIMGVHKI PQVGEFLALT
0401: TFLGFLGLNV VFVVEMVFGS SDWAGGLRWN TVMGTSIQYT TLLVSSCASL CLILWLAATP LKSASNRAEA QIWNMDAQNA LSYPSVQEEE IERTETRRNE
0501: DESIVRLESR VKDQLDTTSV TSSVYDLPEN ILMTDQEIRS SPPEERELDV KYSTSQVSSL KEDSDVKEQS VLQSTVVNEV SDKDLIVETK MAKIEPMSPV
0601: EKIVSMENNS KFIEKDVEGV SWETEEATKA APTSNFTVGS DGPPSFRSLS GEGGSGTGSL SRLQGLGRAA RRHLSAILDE FWGHLYDFHG QLVAEARAKK
0701: LDQLFGTDQK SASSMKADSF GKDISSGYCM SPTAKGMDSQ MTSSLYDSLK QQRTPGSIDS LYGLQRGSSP SPLVNRMQML GAYGNTTNNN NAYELSERRY
0801: SSLRAPSSSE GWEHQQPATV HGYQMKSYVD NLAKERLEAL QSRGEIPTSR SMALGTLSYT QQLALALKQK SQNGLTPGPA PGFENFAGSR SISRQSERSY
0901: YGVPSSGNTD TVGAAVANEK KYSSMPDISG LSMSARNMHL PNNKSGYWDP SSGGGGYGAS YGRLSNESSL YSNLGSRVGV PSTYDDISQS RGGYRDAYSL
1001: PQSATTGTGS LWSRQPFEQF GVAERNGAVG EELRNRSNPI NIDNNASSNV DAEAKLLQSF RHCILKLIKL EGSEWLFGQS DGVDEELIDR VAAREKFIYE
1101: AEAREINQVG HMGEPLISSV PNCGDGCVWR ADLIVSFGVW CIHRVLDLSL MESRPELWGK YTYVLNRLQG VIDPAFSKLR TPMTPCFCLQ IPASHQRASP
1201: TSANGMLPPA AKPAKGKCTT AVTLLDLIKD VEMAISCRKG RTGTAAGDVA FPKGKENLAS VLKRYKRRLS NKPVGMNQDG PGSRKNVTAY GSLG
Arabidopsis Description
EIN2Ethylene-insensitive protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S814]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.