Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g056580.2.1 | |
| Solyc12g011330.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03280.1 | Solyc07g056580.2.1 | AT1G66340.1 | 19769567 |
| AT5G03280.1 | Solyc12g011330.2.1 | AT1G66340.1 | 19769567 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G050310.2 | Barley | plasma membrane | 37.8 | 19.35 |
| KXG37779 | Sorghum | plasma membrane | 37.01 | 10.09 |
| Zm00001d033625_P015 | Maize | plasma membrane | 37.01 | 9.87 |
| TraesCSU01G131600.1 | Wheat | plasma membrane | 36.22 | 9.45 |
| TraesCSU01G131800.1 | Wheat | plasma membrane | 35.43 | 9.43 |
| TraesCS5A01G547500.1 | Wheat | plasma membrane | 35.43 | 9.24 |
| PGSC0003DMT400055484 | Potato | plasma membrane | 89.76 | 8.76 |
| Solyc09g007870.2.1 | Tomato | plastid | 89.76 | 8.66 |
| TraesCS4B01G381200.1 | Wheat | plasma membrane | 33.07 | 8.62 |
| OQU91151 | Sorghum | plasma membrane | 28.35 | 7.41 |
| Zm00001d013492_P001 | Maize | plasma membrane | 32.28 | 7.37 |
| Solyc04g078250.2.1 | Tomato | cytosol, nucleus, plasma membrane | 25.2 | 6.17 |
| VIT_08s0040g01730.t01 | Wine grape | plasma membrane | 60.63 | 5.84 |
| Solyc03g116900.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 23.62 | 5.75 |
| Solyc02g092800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 22.05 | 5.5 |
| CDY10393 | Canola | plasma membrane | 49.61 | 5.27 |
| CDX70318 | Canola | plasma membrane | 48.82 | 5.18 |
| HORVU4Hr1G090460.5 | Barley | plasma membrane | 16.54 | 5.12 |
| AT5G03280.1 | Thale cress | plasma membrane | 51.97 | 5.1 |
| Solyc11g018530.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 21.26 | 5.09 |
| KRH67695 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 48.82 | 4.82 |
| KRH19943 | Soybean | plasma membrane | 49.61 | 4.8 |
| KRH32544 | Soybean | plasma membrane | 48.03 | 4.7 |
| Bra009539.1-P | Field mustard | plasma membrane | 48.03 | 4.65 |
| GSMUA_Achr9P10350_001 | Banana | plasma membrane | 43.31 | 4.56 |
| Solyc04g078240.1.1 | Tomato | cytosol | 5.51 | 4.35 |
| GSMUA_Achr6P31160_001 | Banana | plasma membrane | 40.94 | 4.09 |
| TraesCS2B01G133000.1 | Wheat | plasma membrane | 38.58 | 4.08 |
| TraesCS4A01G275600.1 | Wheat | plasma membrane | 37.8 | 4.0 |
| Os07t0155600-01 | Rice | cytosol, peroxisome, plasma membrane | 40.16 | 3.98 |
| TraesCS4B01G038100.1 | Wheat | plasma membrane | 37.8 | 3.97 |
| TraesCS4D01G036000.3 | Wheat | plasma membrane | 37.8 | 3.96 |
| EES02232 | Sorghum | plasma membrane | 39.37 | 3.93 |
| TraesCS5A01G161200.4 | Wheat | plasma membrane | 37.8 | 3.87 |
| TraesCS5B01G158500.1 | Wheat | plasma membrane | 37.8 | 3.87 |
| TraesCS5D01G166000.1 | Wheat | plasma membrane | 37.8 | 3.87 |
| Zm00001d039341_P126 | Maize | plasma membrane | 39.37 | 3.85 |
| Os03t0700800-01 | Rice | plasma membrane | 37.8 | 3.7 |
| GSMUA_Achr7P01280_001 | Banana | plasma membrane | 42.52 | 3.65 |
| KXG37781 | Sorghum | plasma membrane | 31.5 | 3.24 |
| Solyc09g005540.1.1 | Tomato | cytosol, nucleus, vacuole | 3.94 | 0.81 |
| Os07t0156732-01 | Rice | nucleus | 0.0 | 0.0 |
| Solyc04g078230.1.1 | Tomato | cytosol, extracellular, plastid | 0.0 | 0.0 |
| HORVU5Hr1G050330.5 | Barley | plasma membrane | 0.0 | 0.0 |
| Os07t0157401-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc09g005490.1.1 | EnsemblPlantsGene:Solyc09g005490.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | InterPro:NRAMP_fam |
| PANTHER:PTHR11706 | PANTHER:PTHR11706:SF33 | PFAM:PF01566 | TMHMM:TMhelix | UniParc:UPI000276B11B | UniProt:K4CQ39 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:335144..336003
Molecular Weight (calculated)
13735.1 Da
IEP (calculated)
4.008
GRAVY (calculated)
1.186
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDGGVFGFD LVMLVLLFNF AVILCQYLSA CIALVTDRDL VQICSEEYDK VTCIFLGIQA EVSMTALGPH KNVVCGIDLF SCVFLTATSA ILFPLLAYLF
101: DNGSSKLLCI GWASSVLLSY VFGVVIT
101: DNGSSKLLCI GWASSVLLSY VFGVVIT
0001: MEAEIVNVRP QLGFIQRMVP ALLPVLLVSV GYIDPGKWVA NIEGGARFGY DLVAITLLFN FAAILCQYVA ARISVVTGKH LAQICNEEYD KWTCMFLGIQ
0101: AEFSAILLDL TMVVGVAHAL NLLFGVELST GVFLAAMDAF LFPVFASFLE NGMANTVSIY SAGLVLLLYV SGVLLSQSEI PLSMNGVLTR LNGESAFALM
0201: GLLGASIVPH NFYIHSYFAG ESTSSSDVDK SSLCQDHLFA IFGVFSGLSL VNYVLMNAAA NVFHSTGLVV LTFHDALSLM EQVFMSPLIP VVFLMLLFFS
0301: SQITALAWAF GGEVVLHDFL KIEIPAWLHR ATIRILAVAP ALYCVWTSGA DGIYQLLIFT QVLVAMMLPC SVIPLFRIAS SRQIMGVHKI PQVGEFLALT
0401: TFLGFLGLNV VFVVEMVFGS SDWAGGLRWN TVMGTSIQYT TLLVSSCASL CLILWLAATP LKSASNRAEA QIWNMDAQNA LSYPSVQEEE IERTETRRNE
0501: DESIVRLESR VKDQLDTTSV TSSVYDLPEN ILMTDQEIRS SPPEERELDV KYSTSQVSSL KEDSDVKEQS VLQSTVVNEV SDKDLIVETK MAKIEPMSPV
0601: EKIVSMENNS KFIEKDVEGV SWETEEATKA APTSNFTVGS DGPPSFRSLS GEGGSGTGSL SRLQGLGRAA RRHLSAILDE FWGHLYDFHG QLVAEARAKK
0701: LDQLFGTDQK SASSMKADSF GKDISSGYCM SPTAKGMDSQ MTSSLYDSLK QQRTPGSIDS LYGLQRGSSP SPLVNRMQML GAYGNTTNNN NAYELSERRY
0801: SSLRAPSSSE GWEHQQPATV HGYQMKSYVD NLAKERLEAL QSRGEIPTSR SMALGTLSYT QQLALALKQK SQNGLTPGPA PGFENFAGSR SISRQSERSY
0901: YGVPSSGNTD TVGAAVANEK KYSSMPDISG LSMSARNMHL PNNKSGYWDP SSGGGGYGAS YGRLSNESSL YSNLGSRVGV PSTYDDISQS RGGYRDAYSL
1001: PQSATTGTGS LWSRQPFEQF GVAERNGAVG EELRNRSNPI NIDNNASSNV DAEAKLLQSF RHCILKLIKL EGSEWLFGQS DGVDEELIDR VAAREKFIYE
1101: AEAREINQVG HMGEPLISSV PNCGDGCVWR ADLIVSFGVW CIHRVLDLSL MESRPELWGK YTYVLNRLQG VIDPAFSKLR TPMTPCFCLQ IPASHQRASP
1201: TSANGMLPPA AKPAKGKCTT AVTLLDLIKD VEMAISCRKG RTGTAAGDVA FPKGKENLAS VLKRYKRRLS NKPVGMNQDG PGSRKNVTAY GSLG
0101: AEFSAILLDL TMVVGVAHAL NLLFGVELST GVFLAAMDAF LFPVFASFLE NGMANTVSIY SAGLVLLLYV SGVLLSQSEI PLSMNGVLTR LNGESAFALM
0201: GLLGASIVPH NFYIHSYFAG ESTSSSDVDK SSLCQDHLFA IFGVFSGLSL VNYVLMNAAA NVFHSTGLVV LTFHDALSLM EQVFMSPLIP VVFLMLLFFS
0301: SQITALAWAF GGEVVLHDFL KIEIPAWLHR ATIRILAVAP ALYCVWTSGA DGIYQLLIFT QVLVAMMLPC SVIPLFRIAS SRQIMGVHKI PQVGEFLALT
0401: TFLGFLGLNV VFVVEMVFGS SDWAGGLRWN TVMGTSIQYT TLLVSSCASL CLILWLAATP LKSASNRAEA QIWNMDAQNA LSYPSVQEEE IERTETRRNE
0501: DESIVRLESR VKDQLDTTSV TSSVYDLPEN ILMTDQEIRS SPPEERELDV KYSTSQVSSL KEDSDVKEQS VLQSTVVNEV SDKDLIVETK MAKIEPMSPV
0601: EKIVSMENNS KFIEKDVEGV SWETEEATKA APTSNFTVGS DGPPSFRSLS GEGGSGTGSL SRLQGLGRAA RRHLSAILDE FWGHLYDFHG QLVAEARAKK
0701: LDQLFGTDQK SASSMKADSF GKDISSGYCM SPTAKGMDSQ MTSSLYDSLK QQRTPGSIDS LYGLQRGSSP SPLVNRMQML GAYGNTTNNN NAYELSERRY
0801: SSLRAPSSSE GWEHQQPATV HGYQMKSYVD NLAKERLEAL QSRGEIPTSR SMALGTLSYT QQLALALKQK SQNGLTPGPA PGFENFAGSR SISRQSERSY
0901: YGVPSSGNTD TVGAAVANEK KYSSMPDISG LSMSARNMHL PNNKSGYWDP SSGGGGYGAS YGRLSNESSL YSNLGSRVGV PSTYDDISQS RGGYRDAYSL
1001: PQSATTGTGS LWSRQPFEQF GVAERNGAVG EELRNRSNPI NIDNNASSNV DAEAKLLQSF RHCILKLIKL EGSEWLFGQS DGVDEELIDR VAAREKFIYE
1101: AEAREINQVG HMGEPLISSV PNCGDGCVWR ADLIVSFGVW CIHRVLDLSL MESRPELWGK YTYVLNRLQG VIDPAFSKLR TPMTPCFCLQ IPASHQRASP
1201: TSANGMLPPA AKPAKGKCTT AVTLLDLIKD VEMAISCRKG RTGTAAGDVA FPKGKENLAS VLKRYKRRLS NKPVGMNQDG PGSRKNVTAY GSLG
Arabidopsis Description
EIN2Ethylene-insensitive protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S814]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.