Factsheet for Os01t0597400-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0364700-00	Rice	extracellular	28.44	81.82
EES01014	Sorghum	plasma membrane	70.43	71.89
Os01t0597600-01	Rice	peroxisome, plasma membrane, vacuole	63.21	66.04
GSMUA_Achr6P35440_001	Banana	plasma membrane	52.14	53.1
VIT_01s0026g02500.t01	Wine grape	plasma membrane	47.86	51.58
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	17.16	50.67
Os04t0460200-01	Rice	endoplasmic reticulum	27.77	50.0
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	22.8	48.1
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	18.51	47.95
Os06t0228500-01	Rice	plasma membrane	44.47	47.7
Solyc05g053970.2.1	Tomato	plasma membrane	37.7	47.44
PGSC0003DMT400082135	Potato	plasma membrane	10.84	47.06
Solyc06g061260.1.1	Tomato	plasma membrane	19.19	44.04
KRG89633	Soybean	plasma membrane	39.95	43.49
Os02t0101000-01	Rice	cytosol, nucleus, plasma membrane	37.92	29.42
Os04t0201800-00	Rice	plasma membrane, plastid	26.64	29.35
Os11t0298000-00	Rice	mitochondrion, plastid	31.15	28.57
Os12t0574000-01	Rice	plasma membrane	34.76	25.93
Os03t0817200-01	Rice	plasma membrane	21.44	22.73
Os04t0565500-01	Rice	cytosol, plasma membrane, plastid	21.44	22.35
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	15.35	21.05
Os07t0231400-01	Rice	plasma membrane	16.25	19.94
Os02t0670900-02	Rice	endoplasmic reticulum, plasma membrane, plastid	21.44	19.51
Os04t0460300-01	Rice	plastid	0.0	0.0

Protein Annotations

MapMan:24.2.3.4.7	EntrezGene:4325958	InterPro:AA_transpt_TM	ProteinID:BAB91845.1	ProteinID:BAF05393.1	ProteinID:BAS72998.1
ProteinID:EAZ12568.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os01g0597400	EnsemblPlants:Os01t0597400-00
PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF297	UniProt:Q8LQU5	TMHMM:TMhelix	UniParc:UPI00000A8261
RefSeq:XP_015633942.1	SEG:seg	:	:	:	:

Description

amino acid transporter-like 16Amino acid transporter, transmembrane domain containing protein. (Os01t0597400-00)

Coordinates

chr1:+:23439509..23441397

Molecular Weight (calculated)

47389.8 Da

IEP (calculated)

8.753

GRAVY (calculated)

0.728

Length

443 amino acids

Sequence
(BLAST)

001: MAADKSPIDE ALLHGKHEEA LLHGKHEHVE QQLLPTSGGS FCITGASFGR SCLNLSNVIS GIGMLSVPYA LSQGGWLSLA LFAMVGAICF YTGKLIYRCM
101: RADRCVRSYP DIGYLAFGRY GRTAIGLIMY VELYLVAISF LILEGDNLDK LLPGTVVKIL GYQVHGKQLF MLVAAAVILP TTWLKNLSML AYVSAVGLVS
201: SVALTVSLVW AGVADKGFHM AGSSILNLSG LPTALSLYFV CFAGHGVFPT VYSSMRARKD FPKVLLISSV LCSLNYAVTA VLGYKIYGED VQAQVTLNLP
301: TGKLYTRIAI LTTLITPLAK YALVIQPVTT AIEEKLSTAA AAVAADAENN RLTRVLTSTT VVFSTVVLAC TVPFFGYLMS FIGSSLNVTV AVLFPCLSYL
401: KIYMPRGGVG RFEVAAIVGI LVIGVCVAVI GTYTSLHQII GTF

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.