Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 3
- golgi 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0509600-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G65990.1 | Os02t0509600-01 | AT1G27300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07473 | Sorghum | plasma membrane | 76.59 | 87.56 |
| TraesCS6A01G254100.1 | Wheat | plasma membrane | 75.56 | 87.41 |
| TraesCS6D01G235500.1 | Wheat | plasma membrane | 75.56 | 87.41 |
| HORVU6Hr1G064740.1 | Barley | plasma membrane | 75.36 | 87.17 |
| Zm00001d017557_P001 | Maize | plastid | 77.21 | 87.04 |
| TraesCS6B01G271500.1 | Wheat | plasma membrane | 74.74 | 86.46 |
| Os04t0565500-01 | Rice | cytosol, plasma membrane, plastid | 69.61 | 79.76 |
| GSMUA_Achr1P02810_001 | Banana | cytosol, plasma membrane, vacuole | 56.06 | 69.29 |
| GSMUA_Achr5P11060_001 | Banana | plasma membrane | 53.39 | 65.66 |
| GSMUA_Achr4P25490_001 | Banana | plasma membrane | 51.33 | 63.78 |
| GSMUA_AchrUn_... | Banana | plasma membrane, plastid, vacuole | 54.62 | 63.64 |
| PGSC0003DMT400045065 | Potato | plasma membrane, plastid | 54.41 | 62.95 |
| VIT_07s0031g02140.t01 | Wine grape | plasma membrane | 53.8 | 62.09 |
| VIT_03s0038g03900.t01 | Wine grape | plasma membrane | 54.0 | 61.74 |
| CDY21456 | Canola | plasma membrane | 50.92 | 61.54 |
| CDY70145 | Canola | plasma membrane | 50.92 | 61.54 |
| Bra000591.1-P | Field mustard | plasma membrane | 50.72 | 61.14 |
| Solyc02g082510.1.1 | Tomato | plasma membrane | 53.18 | 60.94 |
| PGSC0003DMT400086252 | Potato | plasma membrane | 53.18 | 60.94 |
| AT2G42005.1 | Thale cress | plasma membrane | 51.54 | 60.77 |
| AT4G38250.1 | Thale cress | plasma membrane | 52.16 | 58.26 |
| PGSC0003DMT400094217 | Potato | plasma membrane | 50.31 | 58.06 |
| CDY59097 | Canola | plastid | 52.77 | 58.01 |
| PGSC0003DMT400048045 | Potato | plasma membrane | 50.72 | 57.85 |
| CDY54797 | Canola | plastid | 52.36 | 57.3 |
| Bra033558.1-P | Field mustard | plasma membrane | 42.09 | 57.26 |
| Solyc03g032090.1.1 | Tomato | plasma membrane | 50.1 | 57.14 |
| Bra029326.1-P | Field mustard | peroxisome | 50.1 | 57.01 |
| AT5G65990.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 49.9 | 56.91 |
| CDY42861 | Canola | peroxisome | 49.9 | 56.78 |
| CDY47026 | Canola | peroxisome, plastid | 49.69 | 56.15 |
| KRH39423 | Soybean | plasma membrane | 48.05 | 54.67 |
| KRH28932 | Soybean | cytosol, plasma membrane | 40.04 | 54.17 |
| Solyc02g082520.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 46.0 | 53.46 |
| Solyc10g048180.1.1 | Tomato | plasma membrane | 45.79 | 52.22 |
| PGSC0003DMT400033422 | Potato | plasma membrane | 44.97 | 50.69 |
| Os07t0231400-01 | Rice | plasma membrane | 27.52 | 37.12 |
| Os03t0817200-01 | Rice | plasma membrane | 31.62 | 36.84 |
| Os04t0460200-01 | Rice | endoplasmic reticulum | 12.32 | 24.39 |
| Os01t0597600-01 | Rice | peroxisome, plasma membrane, vacuole | 20.74 | 23.82 |
| Os06t0228500-01 | Rice | plasma membrane | 19.51 | 23.0 |
| Os01t0597400-00 | Rice | cytosol, peroxisome, plasma membrane | 19.51 | 21.44 |
| Os02t0101000-01 | Rice | cytosol, nucleus, plasma membrane | 21.56 | 18.39 |
| Os05t0364700-00 | Rice | extracellular | 5.75 | 18.18 |
| Os11t0298000-00 | Rice | mitochondrion, plastid | 17.86 | 18.01 |
| Os12t0574000-01 | Rice | plasma membrane | 20.94 | 17.17 |
| Os04t0201800-00 | Rice | plasma membrane, plastid | 13.14 | 15.92 |
| Os02t0788800-01 | Rice | cytosol, peroxisome, plasma membrane | 10.06 | 15.17 |
| Os04t0460300-01 | Rice | plastid | 0.21 | 0.22 |
Protein Annotations
| MapMan:24.2.3.4.4 | UniProt:A0A0P0VMW4 | InterPro:AA_transpt_TM | ProteinID:BAS80230.1 | GO:GO:0003333 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:Os02g0670900 | EnsemblPlants:Os02t0670900-02 | PFAM:PF01490 | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF259 | TMHMM:TMhelix |
| UniParc:UPI0003939637 | SEG:seg | : | : | : | : |
Description
aromatic and neutral amino acid transporter 3Similar to amino acid transport protein. (Os02t0670900-02);Similar to amino acid transport protein. (Os02t0670900-05)
Coordinates
chr2:+:27244843..27246897
Molecular Weight (calculated)
51948.4 Da
IEP (calculated)
8.208
GRAVY (calculated)
0.782
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: APTLTHSFLL REISGFVSVF CESRPEKRRG NPVNRGVGVP SLGVVLVVLN FDCFVLFVWG RAVVAMGLGN EASSSSSRLL DPAPLLPHHG GDGAGKLSSQ
101: PKTFANVFIA VVGAGVLGLP YTFSRTGWAA GSILLLSVAA LTFYCMMLLV ACRRRLADEH PKIASFGDLG DAVFRGPGRL AVDTMLVLSQ ASFCVGYLIF
201: ISNTMAHLYP VFAPSSNALL SPKALFIWAM LPFQLGLNSI KTLTLLAPLS IFADVVDLGA MGVVLGEDVS VWLAKPPPVF AFGGLSAILY GIGVSVYAFE
301: GIGMVLPLEA EAANKKKFGT TLGLSMGFIA VMYGLFGAMG YIAFGDATRD IITTNLGTGW LSAAVQLGLC INLFFTMPVM MHPVYEVAER LLHGKRYCWW
401: LRWLLVLAVG LSAMYVPNFT DFLALVGSSV CVLLGFVLPA SFHLKVFGAE MSWSGVLSDV LLVLLGLSLA VFGTYTSLLQ IFHSSSA
101: PKTFANVFIA VVGAGVLGLP YTFSRTGWAA GSILLLSVAA LTFYCMMLLV ACRRRLADEH PKIASFGDLG DAVFRGPGRL AVDTMLVLSQ ASFCVGYLIF
201: ISNTMAHLYP VFAPSSNALL SPKALFIWAM LPFQLGLNSI KTLTLLAPLS IFADVVDLGA MGVVLGEDVS VWLAKPPPVF AFGGLSAILY GIGVSVYAFE
301: GIGMVLPLEA EAANKKKFGT TLGLSMGFIA VMYGLFGAMG YIAFGDATRD IITTNLGTGW LSAAVQLGLC INLFFTMPVM MHPVYEVAER LLHGKRYCWW
401: LRWLLVLAVG LSAMYVPNFT DFLALVGSSV CVLLGFVLPA SFHLKVFGAE MSWSGVLSDV LLVLLGLSLA VFGTYTSLLQ IFHSSSA
001: MGLEEQGRAR EDTPLLGKGR PLSSKFKTFA NVFIAIVGAG VLGLPYAFKR TGWLMGLLTL FSVAALINHC MMLLVHIRRK LGVSNIGSFG DLGFAACGNL
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
101: GRFVVDILII LSQAGFCVGY LIFIGNTLAN LSKPTKSTTL MSLRHLMGVS PKSLYIWGCF PFQLGLNSIK TLTHLAPLSI FADVVDLGAM AVVIVEDIKI
201: TVVQRPQVVA FGGMSVFFYG MGVAVYAFEG VGMVLPLESE TKDKDKFGKV LALSMLFIAV MYGSFGVLGY MAFGDDTMDI ITANLGAGVV SSLVQLGLCI
301: NLFFTFPLMM NPVFEIVERR FWSGMYCVWL RWLLVLAVTL VALLVPNFAD FLSLVGSSVC CALGFVLPSL FHLMVFKDEM EWKQRALDVG ILLLGVILGV
401: SGTWSSLTEI FQE
Arabidopsis Description
AVT3BAmino acid transporter AVT3B [Source:UniProtKB/Swiss-Prot;Acc:F4ILY9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.