Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0509600-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G65990.1 | Os02t0509600-01 | AT1G27300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G421800.1 | Wheat | plasma membrane | 86.82 | 87.23 |
| TraesCS2A01G403800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 86.12 | 86.52 |
| TraesCS2D01G400900.1 | Wheat | plasma membrane | 86.12 | 86.52 |
| OQU82139 | Sorghum | peroxisome | 84.24 | 83.45 |
| EES12671 | Sorghum | plastid | 88.71 | 76.01 |
| Zm00001d026121_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 87.06 | 74.75 |
| GSMUA_Achr1P02810_001 | Banana | cytosol, plasma membrane, vacuole | 65.41 | 70.56 |
| Os02t0670900-02 | Rice | endoplasmic reticulum, plasma membrane, plastid | 79.76 | 69.61 |
| GSMUA_Achr5P11060_001 | Banana | plasma membrane | 62.59 | 67.17 |
| GSMUA_AchrUn_... | Banana | plasma membrane, plastid, vacuole | 63.53 | 64.59 |
| VIT_07s0031g02140.t01 | Wine grape | plasma membrane | 63.29 | 63.74 |
| GSMUA_Achr4P25490_001 | Banana | plasma membrane | 58.12 | 63.01 |
| VIT_03s0038g03900.t01 | Wine grape | plasma membrane | 62.59 | 62.44 |
| PGSC0003DMT400045065 | Potato | plasma membrane, plastid | 60.47 | 61.05 |
| CDY70145 | Canola | plasma membrane | 57.65 | 60.79 |
| CDY21456 | Canola | plasma membrane | 57.41 | 60.55 |
| Solyc02g082510.1.1 | Tomato | plasma membrane | 60.47 | 60.47 |
| Bra000591.1-P | Field mustard | plasma membrane | 57.41 | 60.4 |
| AT2G42005.1 | Thale cress | plasma membrane | 58.59 | 60.29 |
| PGSC0003DMT400086252 | Potato | plasma membrane | 60.24 | 60.24 |
| PGSC0003DMT400048045 | Potato | plasma membrane | 60.0 | 59.72 |
| PGSC0003DMT400094217 | Potato | plasma membrane | 59.29 | 59.72 |
| Solyc03g032090.1.1 | Tomato | plasma membrane | 59.53 | 59.25 |
| AT4G38250.1 | Thale cress | plasma membrane | 60.47 | 58.95 |
| AT5G65990.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 58.35 | 58.08 |
| CDY59097 | Canola | plastid | 60.0 | 57.56 |
| Bra033558.1-P | Field mustard | plasma membrane | 48.0 | 56.98 |
| CDY54797 | Canola | plastid | 59.53 | 56.85 |
| Bra029326.1-P | Field mustard | peroxisome | 56.94 | 56.54 |
| CDY42861 | Canola | peroxisome | 56.94 | 56.54 |
| CDY47026 | Canola | peroxisome, plastid | 56.71 | 55.92 |
| KRH39423 | Soybean | plasma membrane | 56.24 | 55.84 |
| Solyc02g082520.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 54.12 | 54.89 |
| KRH28932 | Soybean | cytosol, plasma membrane | 45.65 | 53.89 |
| Solyc10g048180.1.1 | Tomato | plasma membrane | 53.41 | 53.16 |
| PGSC0003DMT400033422 | Potato | plasma membrane | 52.71 | 51.85 |
| Os03t0817200-01 | Rice | plasma membrane | 34.59 | 35.17 |
| Os07t0231400-01 | Rice | plasma membrane | 29.65 | 34.9 |
| Os04t0460200-01 | Rice | endoplasmic reticulum | 13.88 | 23.98 |
| Os06t0228500-01 | Rice | plasma membrane | 21.88 | 22.52 |
| Os01t0597600-01 | Rice | peroxisome, plasma membrane, vacuole | 21.41 | 21.46 |
| Os01t0597400-00 | Rice | cytosol, peroxisome, plasma membrane | 22.35 | 21.44 |
| Os11t0298000-00 | Rice | mitochondrion, plastid | 21.18 | 18.63 |
| Os02t0101000-01 | Rice | cytosol, nucleus, plasma membrane | 24.24 | 18.04 |
| Os12t0574000-01 | Rice | plasma membrane | 23.06 | 16.5 |
| Os05t0364700-00 | Rice | extracellular | 5.88 | 16.23 |
| Os04t0201800-00 | Rice | plasma membrane, plastid | 14.82 | 15.67 |
| Os02t0788800-01 | Rice | cytosol, peroxisome, plasma membrane | 10.82 | 14.24 |
| Os04t0460300-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.3.4.4 | EntrezGene:4336684 | InterPro:AA_transpt_TM | EMBL:AK071118 | EMBL:AK105902 | ProteinID:BAS90520.1 |
| ProteinID:CAE03099.2 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:Os04g0565500 | EnsemblPlants:Os04t0565500-01 | PFAM:PF01490 |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF259 | UniProt:Q7XQJ4 | TMHMM:TMhelix | UniParc:UPI000021C6E6 | RefSeq:XP_015636750.1 |
| SEG:seg | : | : | : | : | : |
Description
aromatic and neutral amino acid transporter 4, Functioning in Cesium Over-transport 8Similar to OSIGBa0158F05.8 protein. (Os04t0565500-01);Amino acid transporter, transmembrane domain containing protein. (Os04t0565500-03)
Coordinates
chr4:-:28341772..28343271
Molecular Weight (calculated)
44791.6 Da
IEP (calculated)
7.843
GRAVY (calculated)
0.801
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLHKEASSS SSRLDAAPLL PHHGHGGGGA GHHLSSQPKT FANVFIAVVG SGVLGLPYTF SRTGWVAGSV LLLAVAALTF HCMMLLVACR RRLAYDHPKI
101: ASFGDLGAAV CGPAGRHVVD AMLVLSQASF CVGYLIFISN TMAHLYPVGD SSPSSPLLTA KAIFIWVMLP FQLGLNSIKT LTLLAPLSIF ADVVDLGAMG
201: VVLGQDVSTW LANKPPVFAS AGPTEILYGL GVAVYAFEGI GMVLPLEAEA ADKRKFGGTL ALSMAFIAVM YGLFGAMGYL AFGAATRDII TTNLGTGWLS
301: VTVQLGLCIN LFFTMPVMMN PVYEVAERLL CRKRYAWWLR WLLVMVVGLM AMLVPNFADF LSLVGSSVCV LLGFVLPAAF HLKVFGAEVG WPGLAGDVAV
401: IVVGTALAVS GTWTSLAQIF SSSDV
101: ASFGDLGAAV CGPAGRHVVD AMLVLSQASF CVGYLIFISN TMAHLYPVGD SSPSSPLLTA KAIFIWVMLP FQLGLNSIKT LTLLAPLSIF ADVVDLGAMG
201: VVLGQDVSTW LANKPPVFAS AGPTEILYGL GVAVYAFEGI GMVLPLEAEA ADKRKFGGTL ALSMAFIAVM YGLFGAMGYL AFGAATRDII TTNLGTGWLS
301: VTVQLGLCIN LFFTMPVMMN PVYEVAERLL CRKRYAWWLR WLLVMVVGLM AMLVPNFADF LSLVGSSVCV LLGFVLPAAF HLKVFGAEVG WPGLAGDVAV
401: IVVGTALAVS GTWTSLAQIF SSSDV
001: MGFQNEASSS SYTLKIPPPA REDSPLLGKG PPLSSQFKTF ANVFIAVVGA GVLGLPYAFK RTGWLMGVLL LVSVSVLTHH CMMLLVYTRR KLDSFNAGIS
101: KIGSFGDLGF AVCGSLGRIV VDLFIILSQA GFCVGYLIFI GTTLANLSDP ESPTSLRHQF TRLGSEFLGV SSKSLYIWGC FPFQLGLNSI KTLTHLAPLS
201: IFADIVDLGA MAVVIVEDSM IILKQRPDVV AFGGMSLFLY GMGVAVYSFE GVGMVLPLES EMKDKDKFGK VLALGMGFIS LIYIAFGILG YLAFGEDTMD
301: IITANLGAGL VSTVVQLGLC INLFFTFPLM MNPVFEIVER RFSRGMYSAW LRWVLVLAVT LVALFVPNFA DFLSLVGSST CCVLGFVLPA LFHLLVFKEE
401: MGWLQWSSDT AIVVLGVVLA VSGTWSSLSE IFSVKV
101: KIGSFGDLGF AVCGSLGRIV VDLFIILSQA GFCVGYLIFI GTTLANLSDP ESPTSLRHQF TRLGSEFLGV SSKSLYIWGC FPFQLGLNSI KTLTHLAPLS
201: IFADIVDLGA MAVVIVEDSM IILKQRPDVV AFGGMSLFLY GMGVAVYSFE GVGMVLPLES EMKDKDKFGK VLALGMGFIS LIYIAFGILG YLAFGEDTMD
301: IITANLGAGL VSTVVQLGLC INLFFTFPLM MNPVFEIVER RFSRGMYSAW LRWVLVLAVT LVALFVPNFA DFLSLVGSST CCVLGFVLPA LFHLLVFKEE
401: MGWLQWSSDT AIVVLGVVLA VSGTWSSLSE IFSVKV
Arabidopsis Description
AVT3CAmino acid transporter AVT3C [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.