Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G075350.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 23.91 | 82.56 |
| HORVU4Hr1G022660.1 | Barley | extracellular | 29.63 | 79.64 |
| EES17245 | Sorghum | cytosol, peroxisome, plasma membrane | 73.06 | 75.35 |
| HORVU5Hr1G020560.3 | Barley | plasma membrane | 74.24 | 74.49 |
| TraesCS5D01G091100.1 | Wheat | plasma membrane | 74.58 | 74.33 |
| TraesCS5A01G081500.1 | Wheat | plasma membrane | 74.58 | 74.2 |
| TraesCS5B01G084900.1 | Wheat | plasma membrane | 74.75 | 74.12 |
| Zm00001d032325_P001 | Maize | mitochondrion, plasma membrane, vacuole | 30.98 | 68.15 |
| Zm00001d030751_P001 | Maize | plasma membrane | 71.72 | 67.41 |
| Zm00001d041534_P002 | Maize | plasma membrane | 68.52 | 66.83 |
| GSMUA_Achr6P34060_001 | Banana | plasma membrane | 47.47 | 51.09 |
| Solyc10g084830.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 40.74 | 45.75 |
| PGSC0003DMT400028760 | Potato | cytosol, peroxisome, plasma membrane | 40.24 | 45.18 |
| Os02t0101000-01 | Rice | cytosol, nucleus, plasma membrane | 42.59 | 44.31 |
| AT5G02170.1 | Thale cress | plasma membrane | 39.23 | 44.3 |
| CDY07919 | Canola | cytosol, nucleus, plasma membrane | 39.06 | 43.94 |
| Bra001315.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 39.06 | 43.94 |
| AT3G09340.1 | Thale cress | plasma membrane | 38.72 | 43.56 |
| Os04t0201800-00 | Rice | plasma membrane, plastid | 29.46 | 43.53 |
| AT3G09330.1 | Thale cress | cytosol, nucleus, plasma membrane | 38.38 | 43.51 |
| CDY40336 | Canola | plasma membrane | 40.07 | 43.51 |
| Bra009608.1-P | Field mustard | plasma membrane | 39.9 | 43.33 |
| AT5G02180.1 | Thale cress | plasma membrane | 40.07 | 43.27 |
| CDY10463 | Canola | plasma membrane | 39.73 | 43.22 |
| Bra005712.1-P | Field mustard | plasma membrane | 36.36 | 43.03 |
| CDY55126 | Canola | plasma membrane | 37.21 | 43.0 |
| Os06t0228500-01 | Rice | plasma membrane | 29.12 | 41.89 |
| Os04t0460200-01 | Rice | endoplasmic reticulum | 16.5 | 39.84 |
| CDX80808 | Canola | plasma membrane | 16.84 | 39.53 |
| CDY55127 | Canola | cytosol, plasma membrane, plastid | 38.05 | 38.7 |
| CDX80809 | Canola | plasma membrane | 38.38 | 38.45 |
| Os01t0597600-01 | Rice | peroxisome, plasma membrane, vacuole | 27.27 | 38.21 |
| Os05t0364700-00 | Rice | extracellular | 9.26 | 35.71 |
| Os01t0597400-00 | Rice | cytosol, peroxisome, plasma membrane | 25.93 | 34.76 |
| Os02t0788800-01 | Rice | cytosol, peroxisome, plasma membrane | 16.67 | 30.65 |
| Os11t0298000-00 | Rice | mitochondrion, plastid | 24.75 | 30.43 |
| Os03t0817200-01 | Rice | plasma membrane | 17.51 | 24.88 |
| Os07t0231400-01 | Rice | plasma membrane | 14.98 | 24.65 |
| Os04t0565500-01 | Rice | cytosol, plasma membrane, plastid | 16.5 | 23.06 |
| Os02t0670900-02 | Rice | endoplasmic reticulum, plasma membrane, plastid | 17.17 | 20.94 |
| Os04t0460300-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.3.4.7 | EntrezGene:4352600 | InterPro:AA_transpt_TM | ProteinID:ABA99689.2 | ProteinID:BAF30118.1 | ProteinID:BAT17764.1 |
| ProteinID:EEE53473.1 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:Os12g0574000 | EnsemblPlants:Os12t0574000-01 |
| PFAM:PF01490 | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF249 | UniProt:Q2QN95 | TMHMM:TMhelix | UniParc:UPI0000D89E51 |
| RefSeq:XP_015619537.1 | SEG:seg | : | : | : | : |
Description
amino acid transporter-like 10Amino acid transporter, transmembrane domain containing protein. (Os12t0574000-01)
Coordinates
chr12:-:23687585..23691107
Molecular Weight (calculated)
63411.0 Da
IEP (calculated)
4.630
GRAVY (calculated)
0.349
Length
594 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRDEEMGHG DRSLLFIGDE DDDLEADRDG GSTPSSDPGS FSDRSDPPSV DDIDEDDDDV VGDGRRAPRD DDDDQRGTWP QSFRQSIDMM SAVPSPAMSS
101: IITAASPNLG RLAAVGSSLL KRATSSAVGQ EGSSLPLSRP LLPPSSLSQL STASGPPVRD SADSLPPRAR PPPPPLQGES VVPPPLPRPS SACLRSNYID
201: LPPPSTRCGQ KQAILNGLNV LCGVGILTTS YGIKQGGWLS LILLPLLGCC SCYTGLLLKK CIDSSPSIDT YPDIGQAAFG IYGRIFVSVV LYLELYACGV
301: EYITLLGDSL SSVFPSADLA FGGIYLNAHN LFAITMALAI LPSVWLKNLR LLSYLSAGGV IATTTVIVCL FWVGIGEGVG FHPGGTALNL THFPVALGLY
401: GYCYSGHSVF PNIYSSMEER PKFTFVLLFC FIVVTFVYAG VAVAGFLMFG ESTMSQFTLN MPQQFIPSKI AIGMTIINPY TKYALTLTPV ALSIEEALPR
501: RMQTYQVGMC VRTALVASTV VVALTFPYFA LVMALLGSVF TMLVALILPC ACYLSIKKGS TPLWEVVLCI TIILLGILCA CVGSYTSVSQ MISR
101: IITAASPNLG RLAAVGSSLL KRATSSAVGQ EGSSLPLSRP LLPPSSLSQL STASGPPVRD SADSLPPRAR PPPPPLQGES VVPPPLPRPS SACLRSNYID
201: LPPPSTRCGQ KQAILNGLNV LCGVGILTTS YGIKQGGWLS LILLPLLGCC SCYTGLLLKK CIDSSPSIDT YPDIGQAAFG IYGRIFVSVV LYLELYACGV
301: EYITLLGDSL SSVFPSADLA FGGIYLNAHN LFAITMALAI LPSVWLKNLR LLSYLSAGGV IATTTVIVCL FWVGIGEGVG FHPGGTALNL THFPVALGLY
401: GYCYSGHSVF PNIYSSMEER PKFTFVLLFC FIVVTFVYAG VAVAGFLMFG ESTMSQFTLN MPQQFIPSKI AIGMTIINPY TKYALTLTPV ALSIEEALPR
501: RMQTYQVGMC VRTALVASTV VVALTFPYFA LVMALLGSVF TMLVALILPC ACYLSIKKGS TPLWEVVLCI TIILLGILCA CVGSYTSVSQ MISR
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.