Factsheet for HORVU5Hr1G020560.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G075350.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	28.04	96.51
TraesCS5A01G081500.1	Wheat	plasma membrane	94.59	93.8
TraesCS5B01G084900.1	Wheat	plasma membrane	94.26	93.16
TraesCS5D01G091100.1	Wheat	plasma membrane	93.58	92.95
HORVU4Hr1G022660.1	Barley	extracellular	34.46	92.31
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	75.84	77.95
Os12t0574000-01	Rice	plasma membrane	74.49	74.24
Zm00001d030751_P001	Maize	plasma membrane	75.84	71.04
Zm00001d041534_P002	Maize	plasma membrane	70.1	68.14
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	30.07	65.93
GSMUA_Achr6P34060_001	Banana	plasma membrane	49.49	53.08
Bra001315.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.71	45.64
AT3G09340.1	Thale cress	plasma membrane	40.54	45.45
CDY07919	Canola	cytosol, nucleus, plasma membrane	40.54	45.45
AT3G09330.1	Thale cress	cytosol, nucleus, plasma membrane	40.2	45.42
Solyc10g084830.1.1	Tomato	cytosol, peroxisome, plasma membrane	40.54	45.37
PGSC0003DMT400028760	Potato	cytosol, peroxisome, plasma membrane	40.2	44.99
AT5G02170.1	Thale cress	plasma membrane	39.86	44.87
HORVU2Hr1G008090.4	Barley	cytosol, peroxisome, plasma membrane	42.57	44.84
CDY55126	Canola	plasma membrane	38.68	44.55
CDY40336	Canola	plasma membrane	41.05	44.42
AT5G02180.1	Thale cress	plasma membrane	41.22	44.36
Bra009608.1-P	Field mustard	plasma membrane	40.88	44.24
Bra005712.1-P	Field mustard	plasma membrane	37.16	43.82
CDY10463	Canola	plasma membrane	40.37	43.77
HORVU7Hr1G038300.27	Barley	plasma membrane	29.39	43.5
CDX80808	Canola	plasma membrane	18.58	43.48
HORVU6Hr1G001480.1	Barley	plasma membrane	42.57	42.42
HORVU2Hr1G080390.1	Barley	plasma membrane	29.22	40.71
HORVU2Hr1G080420.1	Barley	plasma membrane	29.22	40.71
HORVU2Hr1G080350.5	Barley	mitochondrion, plasma membrane, vacuole	29.73	39.91
CDY55127	Canola	cytosol, plasma membrane, plastid	38.68	39.21
HORVU2Hr1G069080.4	Barley	cytosol, peroxisome, plasma membrane	26.69	38.82
HORVU2Hr1G080430.3	Barley	cytosol	28.38	38.18
CDX80809	Canola	plasma membrane	38.01	37.94
HORVU6Hr1G083720.2	Barley	plastid	35.47	36.08
HORVU4Hr1G012350.1	Barley	endoplasmic reticulum, plasma membrane	23.31	34.5
HORVU5Hr1G053550.1	Barley	plasma membrane	17.91	25.18
HORVU5Hr1G112210.1	Barley	plasma membrane	17.91	24.94
HORVU6Hr1G064740.1	Barley	plasma membrane	16.72	23.52
HORVU2Hr1G068460.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	6.08	22.93
HORVU2Hr1G068450.4	Barley	mitochondrion	14.7	20.57
HORVU5Hr1G112960.2	Barley	cytosol	11.66	19.71

Protein Annotations

EnsemblPlants:HORVU5Hr1G020560.3	EnsemblPlantsGene:HORVU5Hr1G020560	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF249	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B46BF0B
UniProt:A0A287QKS5	MapMan:24.2.3.4.7	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:95566866..95569852

Molecular Weight (calculated)

62864.0 Da

IEP (calculated)

5.212

GRAVY (calculated)

0.358

Length

592 amino acids

Sequence
(BLAST)

001: MDRDEEKGHG DRSLLFIGDE DDDLGVDRDG GSPPSSDAGS SFSDRSDDGD GADDATGSGS GSGSDDDADG DGGKEHAPNV ARQQAAWPQS YRQSIDMLSA
101: VQSPSVSGII AASPSITKFG NSFLKAGSSF FLKKVTTEGS LPITRPLLPP SLSQLSQQQE PAGPPSTDSL QPRPTAPHPP AVQQRPSASC LKSNYIELPP
201: PSTKCSSGQS VINGLNVLCG VGILTTCFGI KQAGWLSLLL LPLLGGCSCY TGLLLKRCID SSPTIETYPD IGRAAFGIPG RVFVSVVLYL ELYACCVEYI
301: TLLGDSLSSV FPSAHLAFTG IYLNSHNLFA ISMALAILPS VWLRNLSLLS YLSAGGVVAT LTVIVCLFWV GIGDGVGFHP SGSALNLTHL PVALGLYGYC
401: FSGHSVFPNI YSSMKERSQF PFVLLFCFIV VTIVYSGVAA TGFLMFGEST MSQFTLNMPQ QYVPSKIAIW MTIVNPYTKY ALTMTPVALS IEEALPKKMR
501: NYVAGMCVRT VLVLSTVVVA LSFPYFALVM ALLGSVFTML VALILPCACY LSIKRDSVPL WEVVFCITII FIGLGCACVG SYTSINQMIG GS

Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)

001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN

Arabidopsis Description

AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.