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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane, vacuole
Any Predictor:mitochondrion, plasma membrane, plastid
iPSORT:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES17245 Sorghum cytosol, peroxisome, plasma membrane 73.33 34.38
Zm00001d041534_P002 Maize plasma membrane 77.04 34.15
Os12t0574000-01 Rice plasma membrane 68.15 30.98
Zm00001d030751_P001 Maize plasma membrane 71.11 30.38
TraesCS5D01G091100.1 Wheat plasma membrane 66.67 30.2
HORVU5Hr1G020560.3 Barley plasma membrane 65.93 30.07
TraesCS5A01G081500.1 Wheat plasma membrane 66.3 29.98
TraesCS5B01G084900.1 Wheat plasma membrane 66.3 29.88
GSMUA_Achr6P34060_001 Banana plasma membrane 48.89 23.91
Zm00001d044994_P001 Maize cytosol, plasma membrane, vacuole 12.59 22.22
HORVU4Hr1G022660.1 Barley extracellular 18.15 22.17
Zm00001d037229_P001 Maize plasma membrane 32.22 21.8
CDY55126 Canola plasma membrane 41.48 21.79
AT5G02170.1 Thale cress plasma membrane 41.85 21.48
AT5G02180.1 Thale cress plasma membrane 43.33 21.27
CDY07919 Canola cytosol, nucleus, plasma membrane 41.48 21.21
Bra001315.1-P Field mustard cytosol, peroxisome, plasma membrane 41.11 21.02
AT3G09330.1 Thale cress cytosol, nucleus, plasma membrane 39.63 20.42
Zm00001d004340_P002 Maize plasma membrane 42.96 20.35
CDY40336 Canola plasma membrane 41.11 20.29
Zm00001d048577_P001 Maize cytosol, nucleus, plasma membrane 42.59 20.28
PGSC0003DMT400028760 Potato cytosol, peroxisome, plasma membrane 39.63 20.23
Bra009608.1-P Field mustard plasma membrane 40.74 20.11
Solyc10g084830.1.1 Tomato cytosol, peroxisome, plasma membrane 39.26 20.04
CDY10463 Canola plasma membrane 40.37 19.96
AT3G09340.1 Thale cress plasma membrane 38.52 19.7
Bra005712.1-P Field mustard plasma membrane 36.3 19.52
Zm00001d003422_P001 Maize cytosol, plasma membrane, vacuole 32.59 19.21
HORVU2Hr1G075350.2 Barley endoplasmic reticulum, plasma membrane, vacuole 12.22 19.19
CDX80808 Canola plasma membrane 17.41 18.58
CDX80809 Canola plasma membrane 40.74 18.55
CDY55127 Canola cytosol, plasma membrane, plastid 40.0 18.49
Zm00001d018340_P001 Maize cytosol, peroxisome, plasma membrane 34.44 17.61
Zm00001d052063_P003 Maize plasma membrane 34.81 17.41
Zm00001d037057_P001 Maize cytosol, nucleus, plasma membrane 33.7 17.3
Zm00001d018336_P002 Maize plasma membrane 34.44 17.0
Zm00001d004633_P001 Maize plasma membrane 28.15 16.38
Zm00001d043640_P001 Maize plasma membrane 8.52 13.61
Zm00001d031629_P001 Maize cytosol, plasma membrane, vacuole 8.89 13.33
Zm00001d017557_P001 Maize plastid 20.37 12.73
Zm00001d019225_P001 Maize plasma membrane 19.63 12.38
Zm00001d026121_P001 Maize cytosol, peroxisome, plasma membrane, plastid 18.89 10.3
Zm00001d044387_P001 Maize nucleus 29.26 9.23
Protein Annotations
EnsemblPlants:Zm00001d032325_P001EnsemblPlants:Zm00001d032325_T001EnsemblPlantsGene:Zm00001d032325GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF249PFAM:PF01490ProteinID:ONM04856.1SEG:seg
TMHMM:TMhelixUniParc:UPI0008444C89UniProt:A0A1D6KQ03MapMan:35.1::
Description
Transmembrane amino acid transporter family protein
Coordinates
chr1:-:222560485..222562767
Molecular Weight (calculated)
28406.2 Da
IEP (calculated)
6.462
GRAVY (calculated)
0.889
Length
270 amino acids
Sequence
(BLAST)
001: MSLASGLFGT NGGAFVVSQA VDQHAKRGAV ADGEHADGSE PKPATQACCS PCWVTRILTT SYGIKEGGWS SLLLLPLLGD SSCYTGLLMK RCIDSSPNIG
101: TYPDIGQAAF GVVCRIFVSV VLYLELYASC VEYITLLGDS MSSVFPLAHF DLNAHTLFAI TTALAILPTV CLRNLSLLSY LSAGGVMATI AVIVFLFWVG
201: SCSALVMALL GSVFTMLVAL ILPCACYLSI KKGAVPLWEI ILCIVIIMIG AVCACVGSYT SVSQMISSTR
Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)
001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN
Arabidopsis Description
AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.