Factsheet for Zm00001d037057_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89806	Sorghum	cytosol, nucleus, plasma membrane	77.19	71.1
Zm00001d043640_P001	Maize	plasma membrane	21.29	66.27
Solyc03g063030.2.1	Tomato	plasma membrane	28.71	64.26
Zm00001d048577_P001	Maize	cytosol, nucleus, plasma membrane	68.63	63.67
TraesCS6B01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	67.87	63.41
TraesCS6A01G002400.1	Wheat	cytosol, nucleus, plasma membrane	68.06	63.25
TraesCS6D01G003200.1	Wheat	cytosol, nucleus, plasma membrane	68.44	63.16
HORVU6Hr1G001480.1	Barley	plasma membrane	68.06	60.27
Zm00001d004340_P002	Maize	plasma membrane	64.07	59.12
PGSC0003DMT400036273	Potato	cytosol, nucleus, plasma membrane	44.68	52.93
Bra005061.1-P	Field mustard	cytosol, nucleus, plasma membrane	46.01	52.49
GSMUA_Achr1P03170_001	Banana	cytosol, nucleus, plasma membrane	53.23	49.73
GSMUA_Achr5P10650_001	Banana	cytosol, nucleus, plasma membrane	51.14	48.56
Bra007103.1-P	Field mustard	plasma membrane	36.31	48.48
CDY18351	Canola	plastid	46.2	47.74
VIT_13s0019g04660.t01	Wine grape	cytosol, nucleus, plasma membrane	50.38	47.07
Solyc11g008440.1.1	Tomato	cytosol, nucleus, plasma membrane	49.05	46.49
Bra017088.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.72	45.97
CDY44630	Canola	plasma membrane	47.91	45.9
CDX93284	Canola	cytosol, nucleus, plasma membrane	47.53	45.79
CDX74865	Canola	plasma membrane	47.91	45.65
AT2G39130.2	Thale cress	cytosol, nucleus, plasma membrane	47.53	45.45
CDX78269	Canola	plasma membrane	45.44	45.09
CDX73443	Canola	cytosol, nucleus, plasma membrane	46.01	45.07
AT3G54830.1	Thale cress	nucleus	45.44	43.77
PGSC0003DMT400019190	Potato	cytosol, nucleus, plasma membrane	49.05	42.86
Solyc03g063050.1.1	Tomato	extracellular, plasma membrane	19.96	39.47
Zm00001d044994_P001	Maize	cytosol, plasma membrane, vacuole	10.65	36.6
Zm00001d037229_P001	Maize	plasma membrane	27.57	36.34
Zm00001d018336_P002	Maize	plasma membrane	36.69	35.28
Zm00001d052063_P003	Maize	plasma membrane	36.12	35.19
Zm00001d041534_P002	Maize	plasma membrane	39.35	33.99
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	17.3	33.7
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	33.08	32.95
Zm00001d003422_P001	Maize	cytosol, plasma membrane, vacuole	28.52	32.75
Zm00001d030751_P001	Maize	plasma membrane	39.16	32.59
KRG99991	Soybean	cytosol, nucleus, peroxisome	17.3	31.93
Zm00001d004633_P001	Maize	plasma membrane	22.43	25.43
Zm00001d019225_P001	Maize	plasma membrane	17.11	21.03
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	6.65	19.44
Zm00001d017557_P001	Maize	plastid	15.4	18.75
Zm00001d026121_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	14.64	15.56
Zm00001d044387_P001	Maize	nucleus	24.71	15.19
Solyc03g063040.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	3.42	14.63

Protein Annotations

EnsemblPlants:Zm00001d037057_P001	EnsemblPlants:Zm00001d037057_T001	EnsemblPlantsGene:Zm00001d037057	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF240	PFAM:PF01490	ProteinID:AQK82741.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0008454F3A	UniProt:A0A1D6LTK4	MapMan:24.2.3.4.7	:	:

Description

Transmembrane amino acid transporter family protein

Coordinates

chr6:+:110845121..110851267

Molecular Weight (calculated)

57431.8 Da

IEP (calculated)

5.852

GRAVY (calculated)

0.139

Length

526 amino acids

Sequence
(BLAST)

001: MMSPASERSL IIQSDDDDDA RSGHDVEEPE QDSDSSSSSS SCATPRRGPS SPPYIQQWPQ SYRQSIDILS SVQSPNLSFL GTPTLSRLSN SFLAITDSFR
101: SKAPETISSF IKPLLGPTPS DEQQRQHEGT RKSSEYLVPS RRSSLQQIPE DQKPPVGGHG ASHDQNCSYT QGVMNGINVL CGVGILSTPY AIKQGGWIGL
201: AILCTFALLA WYTGVLLRHC LDSKEGLKTY PDIGHAAFGS TGRIVISIIL YVELYACCIE YLILEGDNLS KLFPNAHLTI GSMTLNSHVF FAILTTIIVM
301: PTTWLRDLSW LSYISAGGVI ASILVVICLF LVGVVNDFGF ENEGTALNAP GIPIAIGLYG YCYSGHGVFP NIYSSLKNRN QFPSILFTCT HICFLFLVSI
401: GLSTFLYAGA AVMGYKMFGE ATESQFTLNL PDNSVISKIA VWTTVANPIT KYPWTCDGLG WFFVCHACDL HFALRLFFGD PQDKSGVASD SSLLVHHSCR
501: GLLCLRGNIL VPVEDNPELR IAQLFL

Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)

001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN

Arabidopsis Description

AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.