Factsheet for Zm00001d037229_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19641	Sorghum	plasma membrane	94.74	94.74
TraesCS7A01G188100.1	Wheat	plasma membrane	79.7	79.7
TraesCS7B01G093100.1	Wheat	plasma membrane	79.45	79.45
TraesCS7D01G189100.1	Wheat	plasma membrane	79.2	79.2
HORVU7Hr1G038300.27	Barley	plasma membrane	79.2	79.0
Os06t0228500-01	Rice	plasma membrane	77.69	75.06
GSMUA_Achr7P18140_001	Banana	plasma membrane	62.16	58.35
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	30.08	57.14
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	24.31	56.73
Solyc05g053970.2.1	Tomato	plasma membrane	49.37	55.97
VIT_01s0026g02500.t01	Wine grape	plasma membrane	57.14	55.47
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	20.55	54.67
KRG89633	Soybean	plasma membrane	51.63	50.61
PGSC0003DMT400082135	Potato	plasma membrane	12.53	49.02
Solyc06g061260.1.1	Tomato	plasma membrane	23.56	48.7
Zm00001d003422_P001	Maize	cytosol, plasma membrane, vacuole	53.13	46.29
Zm00001d044994_P001	Maize	cytosol, plasma membrane, vacuole	16.29	42.48
Zm00001d043640_P001	Maize	plasma membrane	15.54	36.69
Zm00001d052063_P003	Maize	plasma membrane	45.86	33.89
Zm00001d018336_P002	Maize	plasma membrane	45.36	33.09
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	21.8	32.22
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	42.11	31.82
Zm00001d048577_P001	Maize	cytosol, nucleus, plasma membrane	45.11	31.75
Zm00001d004340_P002	Maize	plasma membrane	44.61	31.23
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	13.53	30.0
Zm00001d041534_P002	Maize	plasma membrane	42.36	27.75
Zm00001d037057_P001	Maize	cytosol, nucleus, plasma membrane	36.34	27.57
Zm00001d004633_P001	Maize	plasma membrane	31.83	27.37
Zm00001d030751_P001	Maize	plasma membrane	41.85	26.42
Zm00001d044387_P001	Maize	nucleus	46.12	21.5
Zm00001d017557_P001	Maize	plastid	22.06	20.37
Zm00001d019225_P001	Maize	plasma membrane	21.8	20.33
Zm00001d026121_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	22.81	18.38

Protein Annotations

EnsemblPlants:Zm00001d037229_P001	EnsemblPlants:Zm00001d037229_T001	EnsemblPlantsGene:Zm00001d037229	EntrezGene:103629935	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	PFAM:PF01490	ProteinID:AQK83357.1
TMHMM:TMhelix	UniParc:UPI0002213D82	UniProt:A0A1D6LVR9	MapMan:24.2.3.4.7	:	:

Description

Transmembrane amino acid transporter family protein

Coordinates

chr6:+:116920317..116926344

Molecular Weight (calculated)

43240.3 Da

IEP (calculated)

9.288

GRAVY (calculated)

0.853

Length

399 amino acids

Sequence
(BLAST)

001: MENNTPPKTG TGFLKTCFNG VNALSGVGIL SIPYALSQGG WLSLLIFLTI AIICFYTGIL LQRCIDSSSL VKTYPDIGEL AFGRKGKIIV AIFLYLELYL
101: VAIDFLILEG DNLEKLFPNA NFHAAGLKVG SKQGFVLMFS LLVLPTTWLQ SLNMLAYVAL GGVMASVILI ASVLWVGTFD GVGFHKKGVP VDWSGMPTAM
201: SLYAFCFSGH AVFPMIYTGM RNRKTFPTVL LICFIICTLS YGLTGVIGYL MFGKSLSSQV TLNLPANHFA SNIAIYTTLI NPFTKFALLI TPIAEAIEDK
301: LHVDKNKTVS ILIRTALVVS TTIVALAVPF FAYVVALTGS FLSSTVTILL PCVCYLKISS RTSRNLRLEL VVCLGIIMIG VGLVLVGTYS SLKKIVHSF

Best Arabidopsis Sequence Match ( AT5G15240.1 )
(BLAST)

001: MSEDKDYMSE PFIVKKIDDE ESLLDDYNPQ GNTSFSKTCF HGINALSGVG ILSVPYALAS GGWLSLIILF TVAITTFYCA ILIKRCMEMD PLLRSYPDIG
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF

Arabidopsis Description

AVT1JAmino acid transporter AVT1J [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.