Factsheet for Zm00001d003422_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10943	Sorghum	cytosol, peroxisome, plasma membrane	90.83	90.04
TraesCS2D01G324400.2	Wheat	plasma membrane	73.36	76.36
TraesCS2A01G338600.1	Wheat	plasma membrane	73.36	76.36
TraesCS2B01G343300.2	Wheat	plasma membrane	73.14	76.14
TraesCS1B01G058900.1	Wheat	plasma membrane	68.78	73.6
HORVU2Hr1G080430.3	Barley	cytosol	68.78	71.59
VIT_01s0026g02500.t01	Wine grape	plasma membrane	53.06	59.12
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	21.83	58.48
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	25.98	56.67
Solyc05g053970.2.1	Tomato	plasma membrane	42.79	55.68
Zm00001d037229_P001	Maize	plasma membrane	46.29	53.13
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	17.25	52.67
KRG89633	Soybean	plasma membrane	44.76	50.37
Solyc06g061260.1.1	Tomato	plasma membrane	20.31	48.19
PGSC0003DMT400082135	Potato	plasma membrane	9.83	44.12
Zm00001d044994_P001	Maize	cytosol, plasma membrane, vacuole	14.19	42.48
Zm00001d043640_P001	Maize	plasma membrane	13.54	36.69
Zm00001d018336_P002	Maize	plasma membrane	41.48	34.73
Zm00001d048577_P001	Maize	cytosol, nucleus, plasma membrane	42.58	34.39
Zm00001d052063_P003	Maize	plasma membrane	40.17	34.07
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	38.65	33.52
Zm00001d004340_P002	Maize	plasma membrane	41.27	33.16
Zm00001d032325_P001	Maize	mitochondrion, plasma membrane, vacuole	19.21	32.59
Zm00001d004633_P001	Maize	plasma membrane	31.22	30.82
Zm00001d031629_P001	Maize	cytosol, plasma membrane, vacuole	11.57	29.44
Zm00001d041534_P002	Maize	plasma membrane	38.43	28.9
Zm00001d037057_P001	Maize	cytosol, nucleus, plasma membrane	32.75	28.52
Zm00001d030751_P001	Maize	plasma membrane	39.08	28.32
Zm00001d044387_P001	Maize	nucleus	48.03	25.7
Zm00001d017557_P001	Maize	plastid	23.36	24.77
Zm00001d019225_P001	Maize	plasma membrane	22.71	24.3
Zm00001d026121_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	23.58	21.82

Protein Annotations

EnsemblPlants:Zm00001d003422_P001	EnsemblPlants:Zm00001d003422_T001	EnsemblPlantsGene:Zm00001d003422	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF465	PFAM:PF01490	ProteinID:ONM16928.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0008447C3D	UniProt:A0A1D6E953	MapMan:24.2.3.4.7	:	:

Description

Amino acid/polyamine transporter II

Coordinates

chr2:-:43834579..43837696

Molecular Weight (calculated)

47656.4 Da

IEP (calculated)

8.993

GRAVY (calculated)

0.769

Length

458 amino acids

Sequence
(BLAST)

001: MADGGAASRG PPDGSPPAAL LLLQQPLLHA YEARKDPAAC GREAHGHGFG PDPDGAGAGG GASFVRTCFN GLNGLSGVGL LSIPYALSEG GWLSLALLLL
101: VAAVCCYTGL LLQRCMDASP AVRGYPDIGA LAFGRGGRLA ASAFLYAELY LVAIGFLILE GDNLDKLFPG TSLSLGLRGA ALVVSGKQLF VVLVALVILP
201: TTWLRSLGVL AYVSASGVLA SAVVVVCVLW TALADGVGFR ARGRMLNVSG LPTALGLYTF CYCGHAIFPT LCISMKEKKR FSRVLVICFA ACTLNYASMA
301: ILGYLMYGDD VKSQVTLNLP EGKVVSKLAI YTTLINPFSK YALMVTPLST AVEEKLLAAG RGGKSSRSVS VLVRTLLVVT TVVVALAVPF FGHLMALVGS
401: LLSVMASMLL PCIFYLKIFG AARCGRAEVA LVATIIVLGS VVLATGTYAS VKKIVQDY

Best Arabidopsis Sequence Match ( AT5G15240.1 )
(BLAST)

001: MSEDKDYMSE PFIVKKIDDE ESLLDDYNPQ GNTSFSKTCF HGINALSGVG ILSVPYALAS GGWLSLIILF TVAITTFYCA ILIKRCMEMD PLLRSYPDIG
101: YKAFGNTGRV IVSIFMNLEL YLVATSFLIL EGDNLNKLFS NVGLNFMGLE FQGKQMFIIM VALIILPSVW LDNMRILSYV SASGVFASGV ILASIFSVGA
201: FEGVGFKNND SEVFRLNGVA TSVSLYAFCY CAHPVFPTLY TSMKNKRQFS NVMIICFTIC TFIYASVAVL GYLMYGSDVE SQITLNLPTD KLSSKVAIWT
301: TLVNPIAKFA LMVTPIIDAM RSRFSRVLPN KRASGFLLST ILVTSNVIVA LLLPFFGDLM SLVGAFLSAS ASVILPCLCY LKISGKYQRL GFETLVLIGI
401: TLTGIVVVIT GTYQAVKDIF GRF

Arabidopsis Description

AVT1JAmino acid transporter AVT1J [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.