CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003422_P001	Maize	cytosol, plasma membrane, vacuole	90.04	90.83
TraesCS2A01G338600.1	Wheat	plasma membrane	74.03	77.73
TraesCS2D01G324400.2	Wheat	plasma membrane	74.03	77.73
TraesCS2B01G343300.2	Wheat	plasma membrane	73.81	77.5
TraesCS1B01G058900.1	Wheat	plasma membrane	69.7	75.23
HORVU2Hr1G080430.3	Barley	cytosol	69.48	72.95
VIT_01s0026g02500.t01	Wine grape	plasma membrane	52.38	58.88
Solyc05g050440.2.1	Tomato	extracellular, plasma membrane, vacuole	21.43	57.89
Solyc06g061270.1.1	Tomato	cytosol, plasma membrane	25.54	56.19
Solyc05g053970.2.1	Tomato	plasma membrane	42.64	55.97
PGSC0003DMT400019843	Potato	peroxisome, plasma membrane, plastid, vacuole	17.32	53.33
KXG19641	Sorghum	plasma membrane	45.67	52.88
EES01014	Sorghum	plasma membrane	48.48	51.61
KRG89633	Soybean	plasma membrane	45.24	51.35
OQU87120	Sorghum	peroxisome, plasma membrane, vacuole	48.92	51.02
Solyc06g061260.1.1	Tomato	plasma membrane	20.78	49.74
PGSC0003DMT400082135	Potato	plasma membrane	9.52	43.14
EES07655	Sorghum	plasma membrane	41.77	35.03
EES07657	Sorghum	plasma membrane	39.39	34.87
EES06091	Sorghum	plasma membrane	41.99	33.68
EER89806	Sorghum	cytosol, nucleus, plasma membrane	38.74	31.35
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	38.53	30.9
KXG25873	Sorghum	plasma membrane	40.48	28.42
EES07473	Sorghum	plasma membrane	23.16	25.12
EER93207	Sorghum	plasma membrane	22.73	24.65
EER98235	Sorghum	plastid	21.43	23.02
OQU82139	Sorghum	peroxisome	21.21	22.84
EES12671	Sorghum	plastid	22.73	21.17

Protein Annotations

MapMan:24.2.3.4.7	EntrezGene:8073431	InterPro:AA_transpt_TM	UniProt:C5Y9U5	EnsemblPlants:EES10943	ProteinID:EES10943
ProteinID:EES10943.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	PFAM:PF01490	PANTHER:PTHR22950
PANTHER:PTHR22950:SF465	EnsemblPlantsGene:SORBI_3006G106700	unigene:Sbi.12363	TMHMM:TMhelix	UniParc:UPI0001A86E7C	RefSeq:XP_002446615.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:47641062..47643877

Molecular Weight (calculated)

47906.4 Da

IEP (calculated)

8.566

GRAVY (calculated)

0.760

Length

462 amino acids

Sequence
(BLAST)

001: MANGGAASRG PPDGSPAALV QQPLLHAYEA RKEDPAACDG EAHGFGPAEP DGGASFVRTC FNGLNGLSGV GLLSIPYALS EGGWLSLALL LVVAAVCCYT
101: GLLLQRCMDA SPAVRGYPDI GALAFGRGGR LAASAFLYAE LYLVAIGFLI LEGDNLDKLF PGTSLSLGLG LGDGGAALLV VSGKKLFVVL VALVILPTTW
201: LRSLGVLAYV SASGVLASAV VVVCVLWTAV ADGVGFHARG RMLNVSGLPT ALGLYTFCYC GHAIFPTLCN SMKEKKRFSR VLVICFVLCT LNYGSMAILG
301: YLMYGDDVKS QVTLNLPEGK IGSKLAIYTT LINPFSKYAL MVTPLATAVE ERLQLAAGSG SGSGRGSSSK RSVNVLVRTL LVVSTVVVAI AVPFFGHLMA
401: LVGSLLSVMA AMLLPCIFYL KIFGVARCSR AEVALIATII VLGSVVAAAG TYASVKKIVL DY

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.