CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	89.85	88.83
EES07655	Sorghum	plasma membrane	68.97	65.34
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	59.96	57.96
Bra000217.1-P	Field mustard	plasma membrane	55.56	55.77
CDY35425	Canola	plasma membrane	55.56	55.77
CDY22507	Canola	plasma membrane	54.98	55.19
PGSC0003DMT400080507	Potato	peroxisome	54.79	54.68
Solyc03g078150.2.1	Tomato	peroxisome	54.98	54.67
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	56.13	54.66
CDY06942	Canola	cytosol, peroxisome, plasma membrane	55.75	54.49
CDY23868	Canola	cytosol, nucleus, plasma membrane	55.17	54.44
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.56	54.31
CDX79951	Canola	cytosol, nucleus, plasma membrane	54.98	54.25
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	54.98	54.25
CDY67831	Canola	cytosol, peroxisome, plasma membrane	55.36	54.22
VIT_08s0007g05210.t01	Wine grape	plasma membrane	52.87	53.38
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	42.72	48.48
KRH16006	Soybean	cytosol	31.61	48.39
KRH33027	Soybean	plasma membrane	53.26	47.68
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	39.85	46.64
KRH77523	Soybean	cytosol, nucleus, plasma membrane	39.85	43.97
KRH66774	Soybean	plasma membrane	22.03	43.07
KXG19641	Sorghum	plasma membrane	32.57	42.61
EES10943	Sorghum	cytosol, peroxisome, plasma membrane	34.87	39.39
EER89806	Sorghum	cytosol, nucleus, plasma membrane	40.8	37.3
EES06091	Sorghum	plasma membrane	40.8	36.98
EES01014	Sorghum	plasma membrane	29.12	35.02
OQU87120	Sorghum	peroxisome, plasma membrane, vacuole	29.69	34.99
EES17245	Sorghum	cytosol, peroxisome, plasma membrane	38.12	34.55
KXG25873	Sorghum	plasma membrane	41.0	32.52
EER98235	Sorghum	plastid	19.92	24.19
EES07473	Sorghum	plasma membrane	19.73	24.18
EER93207	Sorghum	plasma membrane	18.97	23.24
OQU82139	Sorghum	peroxisome	18.58	22.61
EES12671	Sorghum	plastid	19.73	20.77

Protein Annotations

MapMan:24.2.3.4.7	EntrezGene:8081965	InterPro:AA_transpt_TM	UniProt:C5XUB9	EnsemblPlants:EES07657	ProteinID:EES07657
ProteinID:EES07657.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	PFAM:PF01490	PANTHER:PTHR22950
PANTHER:PTHR22950:SF358	EnsemblPlantsGene:SORBI_3004G325300	TMHMM:TMhelix	UniParc:UPI0001A8625E	RefSeq:XP_002454681.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:66066932..66070176

Molecular Weight (calculated)

56093.3 Da

IEP (calculated)

5.146

GRAVY (calculated)

0.495

Length

522 amino acids

Sequence
(BLAST)

001: MAAVKEERSV TTEEENGDIE DVPPPPLLGR NGGSEDEAET EEEAGSLKSQ RWPRSFREAT DTYTIAAPPG FGHLGGGDCS GLGSDLKLPL LSDKPEGKQD
101: SAKNLLAEAE PFGSVLSDGK LSDSLQQAPI TPGCNLTQTV FNGVNVLAGI GIFSAPYTIR EAGWASLVVL AFFAVVCCYT GVLLKYCFES KDGVKTFPDI
201: GEAAFGRIGR LLISIVLYTE LYSFCVEFII LEGDNLASIF TSTTFDWNGI HADGRHFFGV LFALVVLPSV WLRDLRVISY LSAGGVFATL LVFLSVGLVG
301: ATGNVGFHMA GKVVKWDGIP FAIGIYGFCY AGHSVFPNIY QSMSDRTKFN SALYICFAIC TAIYGAIAVI GYLMFGDKTL SQITLNLPKD SFASKVALWT
401: TVIIPFTKYS LVINPLARSI EELRPAGFLT DRVFSVMLRT TLVASSVCIA FLLPFFGLVM ALIGSLLSIL VALIMPALCF LKIARNKATR LQVIASVMTV
501: VLGAVCAVLG TYNSIAKIAE SY

Best Arabidopsis Sequence Match ( AT2G41190.1 )
(BLAST)

001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ

Arabidopsis Description

AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.