Factsheet for AT2G41190.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000217.1-P	Field mustard	plasma membrane	87.5	90.19
CDY35425	Canola	plasma membrane	87.5	90.19
CDY22507	Canola	plasma membrane	86.94	89.62
CDY06942	Canola	cytosol, peroxisome, plasma membrane	88.43	88.76
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	88.25	88.58
CDY67831	Canola	cytosol, peroxisome, plasma membrane	87.87	88.37
CDY23868	Canola	cytosol, nucleus, plasma membrane	83.77	84.88
CDX79951	Canola	cytosol, nucleus, plasma membrane	83.58	84.69
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	83.58	84.69
PGSC0003DMT400080507	Potato	peroxisome	62.5	64.05
Solyc03g078150.2.1	Tomato	peroxisome	61.01	62.29
VIT_08s0007g05210.t01	Wine grape	plasma membrane	58.77	60.93
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	53.54	60.17
KRH16006	Soybean	cytosol	38.25	60.12
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	57.84	58.6
TraesCS6D01G331300.1	Wheat	plasma membrane	55.6	57.86
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	58.21	57.78
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	57.65	57.54
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	57.28	57.06
Zm00001d052063_P003	Maize	plasma membrane	56.72	56.3
EES07657	Sorghum	plasma membrane	54.66	56.13
Zm00001d018336_P002	Maize	plasma membrane	57.28	56.12
KRH77523	Soybean	cytosol, nucleus, plasma membrane	49.44	56.03
TraesCS6B01G381900.1	Wheat	plasma membrane	52.99	55.58
EES07655	Sorghum	plasma membrane	57.09	55.54
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	47.57	55.43
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	53.54	54.36
HORVU6Hr1G083720.2	Barley	plastid	57.65	53.09
KRH66774	Soybean	plasma membrane	25.75	51.69
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	29.1	48.3
AT5G02170.1	Thale cress	plasma membrane	42.16	42.97
AT2G39130.2	Thale cress	cytosol, nucleus, plasma membrane	42.91	41.82
AT3G28960.2	Thale cress	plasma membrane	31.16	41.23
AT5G02180.1	Thale cress	plasma membrane	41.98	40.91
AT3G09340.1	Thale cress	plasma membrane	39.93	40.53
AT3G09330.1	Thale cress	cytosol, nucleus, plasma membrane	39.55	40.46
AT5G15240.1	Thale cress	plasma membrane	30.78	39.01
AT3G54830.1	Thale cress	nucleus	38.99	38.28
AT5G16740.1	Thale cress	plasma membrane	24.81	31.22
AT2G42005.1	Thale cress	plasma membrane	18.66	24.21
AT4G38250.1	Thale cress	plasma membrane	19.4	23.85
AT5G65990.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	18.1	22.72
AT3G11900.2	Thale cress	plasma membrane	17.91	22.22

Protein Annotations

MapMan:24.2.3.4.7	EntrezGene:818718	UniProt:A0A178VQ98	ProteinID:AAD11993.2	InterPro:AA_transpt_TM	ProteinID:AEC09942.1
ArrayExpress:AT2G41190	EnsemblPlantsGene:AT2G41190	RefSeq:AT2G41190	TAIR:AT2G41190	RefSeq:AT2G41190-TAIR-G	EnsemblPlants:AT2G41190.1
TAIR:AT2G41190.1	EMBL:AY039978	EMBL:AY079364	Unigene:At.12553	EMBL:BT000792	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0006865	GO:GO:0008150	GO:GO:0015171
GO:GO:0016020	GO:GO:0016021	RefSeq:NP_030664.1	UniProt:O80668	ProteinID:OAP07928.1	PFAM:PF01490
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR22950	PANTHER:PTHR22950:SF358	TMHMM:TMhelix	UniParc:UPI00000A8D5A
SEG:seg	:	:	:	:	:

Description

AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]

Coordinates

chr2:-:17167279..17170559

Molecular Weight (calculated)

58866.2 Da

IEP (calculated)

4.517

GRAVY (calculated)

0.290

Length

536 amino acids

Sequence
(BLAST)

001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG LMMALIGSLL SILVAIIMPA LCFIKIMGNK
501: ATRTQMILSS IIVAIGVVSG TLGTYSSVAK IIRNYQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.