CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27948	Soybean	plasma membrane	27.86	54.91
KRH77523	Soybean	cytosol, nucleus, plasma membrane	70.38	50.74
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	56.6	43.27
KRH66774	Soybean	plasma membrane	32.55	41.57
KRH33027	Soybean	plasma membrane	67.74	39.62
PGSC0003DMT400080507	Potato	peroxisome	60.7	39.58
Solyc03g078150.2.1	Tomato	peroxisome	60.12	39.05
Bra000217.1-P	Field mustard	plasma membrane	58.94	38.65
CDY35425	Canola	plasma membrane	58.94	38.65
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	51.91	38.48
CDY22507	Canola	plasma membrane	58.36	38.27
AT2G41190.1	Thale cress	cytosol, peroxisome, plasma membrane	60.12	38.25
CDY06942	Canola	cytosol, peroxisome, plasma membrane	58.65	37.45
CDY67831	Canola	cytosol, peroxisome, plasma membrane	58.36	37.34
Bra016949.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.36	37.27
CDY23868	Canola	cytosol, nucleus, plasma membrane	57.48	37.05
VIT_08s0007g05210.t01	Wine grape	plasma membrane	55.72	36.75
TraesCS6A01G348300.2	Wheat	cytosol, plasma membrane, vacuole	51.32	36.69
CDX79951	Canola	cytosol, nucleus, plasma membrane	56.6	36.48
Bra004605.1-P	Field mustard	cytosol, nucleus, plasma membrane	56.6	36.48
KRH40411	Soybean	plasma membrane	28.45	36.06
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	55.13	34.81
TraesCS6D01G331300.1	Wheat	plasma membrane	51.61	34.17
TraesCS6A01G348400.1	Wheat	cytosol, peroxisome, plasma membrane	51.61	33.27
TraesCS6B01G381900.1	Wheat	plasma membrane	49.27	32.88
KRG89633	Soybean	plasma membrane	39.0	32.68
TraesCS6D01G331400.2	Wheat	cytosol, peroxisome, plasma membrane	51.32	32.59
TraesCS6B01G382000.2	Wheat	cytosol, peroxisome, plasma membrane	51.32	32.53
Zm00001d018336_P002	Maize	plasma membrane	51.91	32.36
EES07655	Sorghum	plasma membrane	51.91	32.12
Zm00001d052063_P003	Maize	plasma membrane	50.73	32.04
EES07657	Sorghum	plasma membrane	48.39	31.61
Zm00001d018340_P001	Maize	cytosol, peroxisome, plasma membrane	48.39	31.25
HORVU6Hr1G083720.2	Barley	plastid	52.2	30.58
KRH38592	Soybean	endoplasmic reticulum	21.41	30.54
KRH40095	Soybean	plasma membrane	38.12	30.52
KRH01177	Soybean	plasma membrane	36.95	29.37
KRH40094	Soybean	plasma membrane	36.36	29.04
KRH30199	Soybean	extracellular, plasma membrane	31.67	28.95
KRG98784	Soybean	plasma membrane	29.62	27.45
KRH33248	Soybean	cytosol, nucleus, plasma membrane	42.82	26.94
KRH71649	Soybean	cytosol, nucleus, plasma membrane	42.82	26.94
KRG91942	Soybean	plasma membrane	42.82	26.84
KRH34828	Soybean	plasma membrane	43.11	26.2
KRG98240	Soybean	plasma membrane	33.43	26.09
KRH30194	Soybean	plasma membrane	33.14	25.86
KRG99991	Soybean	cytosol, nucleus, peroxisome	20.82	24.91
Os02t0788800-01	Rice	cytosol, peroxisome, plasma membrane	22.58	23.84
KRG97383	Soybean	mitochondrion	29.33	21.19
KRH58803	Soybean	mitochondrion	28.45	21.09
KRH75803	Soybean	mitochondrion	19.35	21.09
KRH31531	Soybean	mitochondrion	27.57	20.8
KRH28932	Soybean	cytosol, plasma membrane	17.6	16.67
KRH68062	Soybean	plasma membrane	20.53	16.67
KRG96325	Soybean	plasma membrane	20.53	16.59
KRH39423	Soybean	plasma membrane	19.35	15.42
KRG99573	Soybean	cytosol, nucleus, plasma membrane	4.69	14.95

Protein Annotations

EMBL:ACUP02008752	EnsemblPlants:KRH16006	EnsemblPlantsGene:GLYMA_14G125800	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF457	PFAM:PF01490	ProteinID:KRH16006	ProteinID:KRH16006.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002961CD2	UniProt:K7M6D5	MapMan:24.2.3.4.7	:

Description

hypothetical protein

Coordinates

chr14:+:19921260..19924576

Molecular Weight (calculated)

37704.3 Da

IEP (calculated)

6.691

GRAVY (calculated)

0.536

Length

341 amino acids

Sequence
(BLAST)

001: MESRITQSTS GEQGSVQEHL HGELPTGQCS FLQTVFNATN VMTGVGILST PYALKEAGWM SMVYCFESRE GITSYPTIGE VAFGKYDRII VSSCCVELIT
101: LEGDNLTVLF PGTSLDLGSF KLDFVHLFGI LAALIIILTV WLKDLRIISI LSVLQHSIWR SFCNTVGTIN RVGFHHTGQL VKWSGIPLAI GIHGFCFAGH
201: AVFPNIYQSM ADKRQFIKAL IICFVLSATM YGGGAIMGFP MFGDGTLSQI TLNMPRGALA SKVTLWTTVI NPFTKYALLM NPLARSLEEL LPDRISNNYG
301: CFILLKTTLV VSTFCVVFLI FFWVCDDFNW VSLPCTFESF V

Best Arabidopsis Sequence Match ( AT2G41190.2 )
(BLAST)

001: MEDKNNDKEK KTDVTFEDDE DNEDLEDNSS KYENDSETDQ SDLGDLPGDA VDRDDDIDEP FISQVQWPQS FRETTDSYTI AASPIFGSLR SNPPSFYRAS
101: RSNLDVESKA PLLPERHDDS DKASATQSAW SHKGSFAEEL PIGGYGCSVI QTIFNAINVM AGVGLLSTPY TVKEAGWASM VILLLFAVIC CYTATLMKDC
201: FENKTGIITY PDIGEAAFGK YGRILICMLL YTELYSYCVE FIILEGDNLT GLFPGTSLDL LGFRLDSKHL FGILTALIVL PTVWLKDLRI ISYLSAGGVI
301: ATALIAVSVF FLGTTGGIGF HHTGQAVKWN GIPFAIGIYG FCYSGHSVFP NIYQSMADKT KFNKAVITCF IICVLLYGGV AIMGYLMFGE ATLSQITLNM
401: PQDQFFSKVA QWTTVVSPFT KYALLMNPLA RSIEELLPER MSENIWCFLL LRTALVASSV CSAFLIPFFG KNIKLERLRT HSCVVLLDLL LNGLFLQLVL
501: FSTQVL

Arabidopsis Description

AVT1AAmino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.