CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71649	Soybean	cytosol, nucleus, plasma membrane	94.65	94.65
KRG91942	Soybean	plasma membrane	70.48	70.22
KRH34828	Soybean	plasma membrane	69.0	66.67
KRG99573	Soybean	cytosol, nucleus, plasma membrane	12.36	62.62
KRH38592	Soybean	endoplasmic reticulum	21.4	48.54
KRH16006	Soybean	cytosol	26.94	42.82
KRH40411	Soybean	plasma membrane	21.22	42.75
KRH40095	Soybean	plasma membrane	32.1	40.85
KRH40094	Soybean	plasma membrane	31.18	39.58
KRH01177	Soybean	plasma membrane	31.0	39.16
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	33.03	38.91
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	31.92	38.79
KRH30199	Soybean	extracellular, plasma membrane	26.57	38.61
KRH33027	Soybean	plasma membrane	41.51	38.59
KRH77523	Soybean	cytosol, nucleus, plasma membrane	32.84	37.63
KRH27948	Soybean	plasma membrane	11.99	37.57
KRG89633	Soybean	plasma membrane	27.86	37.1
KRG98784	Soybean	plasma membrane	25.09	36.96
KRH66774	Soybean	plasma membrane	17.9	36.33
KRH30194	Soybean	plasma membrane	28.41	35.24
KRG98240	Soybean	plasma membrane	28.23	35.01
KRH75803	Soybean	mitochondrion	19.0	32.91
KRG99991	Soybean	cytosol, nucleus, peroxisome	16.97	32.28
KRG97383	Soybean	mitochondrion	26.75	30.72
KRH31531	Soybean	mitochondrion	24.72	29.65
KRH58803	Soybean	mitochondrion	24.91	29.35
KRG96325	Soybean	plasma membrane	18.27	23.46
KRH39423	Soybean	plasma membrane	17.53	22.2
KRH68062	Soybean	plasma membrane	17.16	22.14
KRH28932	Soybean	cytosol, plasma membrane	13.65	20.56

Protein Annotations

EntrezGene:100781123	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	EMBL:ACUP02006428	EnsemblPlantsGene:GLYMA_10G109500	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171
GO:GO:0016020	GO:GO:0016021	UniProt:K7LIG5	EnsemblPlants:KRH33248	ProteinID:KRH33248	ProteinID:KRH33248.1
ProteinID:KRH33249.1	ProteinID:KRH33250.1	ProteinID:KRH33251.1	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF240
TMHMM:TMhelix	UniParc:UPI000233D7D3	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:25381298..25408634

Molecular Weight (calculated)

59003.0 Da

IEP (calculated)

6.579

GRAVY (calculated)

0.442

Length

542 amino acids

Sequence
(BLAST)

001: MKNSASESGL YIIESDEDVE KDMQKDENDG NDSDYSNDSN GNLSMRKPSN YSIAWPQSYR QSIDLYGSVP SPNIGFLGTT SLSRLSSSFI SSSLTRRHTL
101: EVLQPEKKPL LQPTEEEQPR HTLLPPQISR KSSIKISKVS HEPHIPGQCT FGQAVLNGIN ALCGIGILST PYAAKEGGWI GLSILLLYAV FSFYTGLLLR
201: YCLDSAPGLE TYPDIGQAAF GTTGRVIISI ILYMELYACC IEYIIVESDN LSTLFPNAHI SLGGVELNAH ILFAILTAVA LLPTVWLRDL RILSYISACG
301: VIATILVVLC LFWVGLLDNA DIHTQGTTKT FNLATFPVAI GLYGYCYAGH AVFPNIYTAM ANRNQFPGVL LVCFAICTSM YCAVAIMGYT AFGKATLSQY
401: TLNMPQHLVA TKIAVWTTVV NPFTKYALSL SPVAMCLEEL IPANSPNFFI YSKLIRTALV VSTLLVGLSV PFFGLVMSLT GSLLTMFVSL ILPAACFLSI
501: RGGRITRFQV SICVTIIVVG IVSSCLGSYS ALSEIIQELF KS

Best Arabidopsis Sequence Match ( AT2G39130.1 )
(BLAST)

001: MNHVPSDQSF YIESEDEDDR KDYVEEDGGS HSDSSDDVYD ENQAHIKPSS YTTAWPQSYR QSIDLYSSVP SPGIGFLGNN SMTRFGSSFL SSGLIRRHTP
101: ESLPTVTKPL LEEQADEQAL PKHRLSSQGL LSPIPSRRGS MRKDEKSSMV SHEIPMSRNS SYGQAVLNGL NVLCGVGILS TPYAAKEGGW LGLMILFVYG
201: LLSFYTGILL RYCLDSESDL ETYPDIGQAA FGTTGRIFVS IVLYLELYAC CVEYIILESD NLSSLYPNAA LSIGGFQLDA RHLFALLTTL AVLPTVWLRD
301: LSVLSYISAG GVIASVLVVL CLFWIGLVDE VGIHSKGTTL NLSTLPVAIG LYGYCYSGHA VFPNIYTSMA KPSQYPAVLL TCFGICTLMY AGVAVMGYTM
401: FGESTQSQFT LNLPQDLIAT KIAVWTTVVN PFTKYALTIS PVAMSLEELI PSRHIRSHWY AIGIRTLLVF STLLVGLAIP FFGLVMSLIG SLLTMLVTLI
501: LPPACFLSIV RRKVTPTQMM LCVLIIIVGA ISSVIGSYSA LSKIVEKLTN

Arabidopsis Description

AVT1CAmino acid transporter AVT1C [Source:UniProtKB/Swiss-Prot;Acc:F4IUW3]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.