Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- golgi 2
- extracellular 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G65990.1 | KRG97393 | AT1G27300.1 | 21798944 |
| AT5G65990.1 | KRH31520 | AT1G27300.1 | 21798944 |
| AT5G65990.1 | KRH76090 | AT1G27300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0031g02140.t01 | Wine grape | plasma membrane | 63.32 | 64.22 |
| KRH28932 | Soybean | cytosol, plasma membrane | 53.04 | 63.06 |
| Solyc03g032090.1.1 | Tomato | plasma membrane | 60.75 | 60.89 |
| PGSC0003DMT400045065 | Potato | plasma membrane, plastid | 59.81 | 60.81 |
| PGSC0003DMT400048045 | Potato | plasma membrane | 60.28 | 60.42 |
| PGSC0003DMT400086252 | Potato | plasma membrane | 59.81 | 60.24 |
| Solyc02g082510.1.1 | Tomato | plasma membrane | 59.11 | 59.53 |
| AT5G65990.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 59.35 | 59.48 |
| CDY42861 | Canola | peroxisome | 59.11 | 59.11 |
| Bra029326.1-P | Field mustard | peroxisome | 58.88 | 58.88 |
| CDY47026 | Canola | peroxisome, plastid | 58.88 | 58.47 |
| PGSC0003DMT400094217 | Potato | plasma membrane | 56.54 | 57.35 |
| TraesCS2A01G403800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 55.61 | 56.26 |
| Os04t0565500-01 | Rice | cytosol, plasma membrane, plastid | 55.84 | 56.24 |
| TraesCS2B01G421800.1 | Wheat | plasma membrane | 55.37 | 56.03 |
| GSMUA_Achr1P02810_001 | Banana | cytosol, plasma membrane, vacuole | 51.4 | 55.84 |
| TraesCS2D01G400900.1 | Wheat | plasma membrane | 55.14 | 55.79 |
| EES07473 | Sorghum | plasma membrane | 55.14 | 55.4 |
| Zm00001d017557_P001 | Maize | plastid | 55.84 | 55.32 |
| GSMUA_Achr5P11060_001 | Banana | plasma membrane | 51.17 | 55.3 |
| TraesCS6B01G271500.1 | Wheat | plasma membrane | 54.21 | 55.11 |
| GSMUA_Achr4P25490_001 | Banana | plasma membrane | 50.47 | 55.1 |
| TraesCS6A01G254100.1 | Wheat | plasma membrane | 53.97 | 54.87 |
| TraesCS6D01G235500.1 | Wheat | plasma membrane | 53.74 | 54.63 |
| Solyc02g082520.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 53.04 | 54.18 |
| HORVU6Hr1G064740.1 | Barley | plasma membrane | 53.04 | 53.92 |
| OQU82139 | Sorghum | peroxisome | 53.97 | 53.85 |
| GSMUA_AchrUn_... | Banana | plasma membrane, plastid, vacuole | 50.0 | 51.2 |
| EES12671 | Sorghum | plastid | 56.54 | 48.79 |
| Zm00001d026121_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 56.31 | 48.69 |
| Os02t0670900-02 | Rice | endoplasmic reticulum, plasma membrane, plastid | 54.67 | 48.05 |
| KRG96325 | Soybean | plasma membrane | 33.41 | 33.89 |
| KRH68062 | Soybean | plasma membrane | 32.48 | 33.1 |
| KRH30199 | Soybean | extracellular, plasma membrane | 18.93 | 21.72 |
| KRH40095 | Soybean | plasma membrane | 21.5 | 21.6 |
| KRH40094 | Soybean | plasma membrane | 20.56 | 20.61 |
| KRG99573 | Soybean | cytosol, nucleus, plasma membrane | 5.14 | 20.56 |
| KRH40411 | Soybean | plasma membrane | 12.85 | 20.45 |
| KRG98240 | Soybean | plasma membrane | 20.79 | 20.37 |
| KRH30194 | Soybean | plasma membrane | 20.79 | 20.37 |
| KRH01177 | Soybean | plasma membrane | 20.33 | 20.28 |
| KRG89633 | Soybean | plasma membrane | 18.93 | 19.9 |
| KRH16006 | Soybean | cytosol | 15.42 | 19.35 |
| KRG98784 | Soybean | plasma membrane | 15.65 | 18.21 |
| KRH71649 | Soybean | cytosol, nucleus, plasma membrane | 22.9 | 18.08 |
| KRG97383 | Soybean | mitochondrion | 19.39 | 17.58 |
| KRH33248 | Soybean | cytosol, nucleus, plasma membrane | 22.2 | 17.53 |
| KRG95106 | Soybean | cytosol, peroxisome, plasma membrane | 18.69 | 17.39 |
| KRH38592 | Soybean | endoplasmic reticulum | 9.35 | 16.74 |
| KRH31531 | Soybean | mitochondrion | 17.52 | 16.59 |
| KRG91942 | Soybean | plasma membrane | 20.79 | 16.36 |
| KRH58803 | Soybean | mitochondrion | 17.52 | 16.3 |
| KRH27948 | Soybean | plasma membrane | 6.54 | 16.18 |
| KRH33027 | Soybean | plasma membrane | 21.96 | 16.12 |
| KRH66774 | Soybean | plasma membrane | 10.05 | 16.1 |
| KRH34828 | Soybean | plasma membrane | 21.03 | 16.04 |
| KRH71933 | Soybean | cytosol, peroxisome, plasma membrane | 15.65 | 15.02 |
| KRH75803 | Soybean | mitochondrion | 10.98 | 15.02 |
| KRG99991 | Soybean | cytosol, nucleus, peroxisome | 9.81 | 14.74 |
| KRH77523 | Soybean | cytosol, nucleus, plasma membrane | 16.12 | 14.59 |
Protein Annotations
| EntrezGene:100791548 | MapMan:24.2.3.4.4 | InterPro:AA_transpt_TM | EMBL:ACUP02005935 | EnsemblPlantsGene:GLYMA_09G197800 | GO:GO:0003333 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 |
| GO:GO:0016021 | UniProt:I1L4Q1 | EnsemblPlants:KRH39423 | ProteinID:KRH39423 | ProteinID:KRH39423.1 | PFAM:PF01490 |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF464 | TMHMM:TMhelix | UniParc:UPI0002337CF9 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:-:42236583..42237869
Molecular Weight (calculated)
46998.1 Da
IEP (calculated)
6.497
GRAVY (calculated)
0.753
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFHNNNNNN NNNVETPFLS NAPPLSSKFK TLANIFISIV GSGVLGLPYS FKKTGWVTGM LMLFLVAFLT YHCMILLVHT RRKLEHSNDD VNVGFPKINS
101: FGDLGHAIVG PLGKLFVDVM IVFSHCGFCV SYLIFISTTL AYLAGDDDTS SASWSSLFWG FATPKVLFLW GCFPFQLGLN AIPTLTHLAP LSIFADFVDI
201: VAKSVVMVDD VFVFMKNRPP LKAFGGWSVF LYGLGVAVYA FEGIGLVLPL EAEAKDKEKF GGVLGVGMFL ISLLYASFAA LGYLAFGEGT QEIITTNLGQ
301: GVVSALVQLG LCINLFFTFP LMMNPVYEVV ERRLCDYKFC LWMRWLLVFG VSLVALMVPN FADFLSLVGS SVCVILSFVL PAMFHYLVFR EEIGWSKMVC
401: DGLLVVFGLV IAVTGTWSSL MNIFGPNA
101: FGDLGHAIVG PLGKLFVDVM IVFSHCGFCV SYLIFISTTL AYLAGDDDTS SASWSSLFWG FATPKVLFLW GCFPFQLGLN AIPTLTHLAP LSIFADFVDI
201: VAKSVVMVDD VFVFMKNRPP LKAFGGWSVF LYGLGVAVYA FEGIGLVLPL EAEAKDKEKF GGVLGVGMFL ISLLYASFAA LGYLAFGEGT QEIITTNLGQ
301: GVVSALVQLG LCINLFFTFP LMMNPVYEVV ERRLCDYKFC LWMRWLLVFG VSLVALMVPN FADFLSLVGS SVCVILSFVL PAMFHYLVFR EEIGWSKMVC
401: DGLLVVFGLV IAVTGTWSSL MNIFGPNA
001: MGFQNEASSS SYTLKIPPPA REDSPLLGKG PPLSSQFKTF ANVFIAVVGA GVLGLPYAFK RTGWLMGVLL LVSVSVLTHH CMMLLVYTRR KLDSFNAGIS
101: KIGSFGDLGF AVCGSLGRIV VDLFIILSQA GFCVGYLIFI GTTLANLSDP ESPTSLRHQF TRLGSEFLGV SSKSLYIWGC FPFQLGLNSI KTLTHLAPLS
201: IFADIVDLGA MAVVIVEDSM IILKQRPDVV AFGGMSLFLY GMGVAVYSFE GVGMVLPLES EMKDKDKFGK VLALGMGFIS LIYIAFGILG YLAFGEDTMD
301: IITANLGAGL VSTVVQLGLC INLFFTFPLM MNPVFEIVER RFSRGMYSAW LRWVLVLAVT LVALFVPNFA DFLSLVGSST CCVLGFVLPA LFHLLVFKEE
401: MGWLQWSSDT AIVVLGVVLA VSGTWSSLSE IFSVKV
101: KIGSFGDLGF AVCGSLGRIV VDLFIILSQA GFCVGYLIFI GTTLANLSDP ESPTSLRHQF TRLGSEFLGV SSKSLYIWGC FPFQLGLNSI KTLTHLAPLS
201: IFADIVDLGA MAVVIVEDSM IILKQRPDVV AFGGMSLFLY GMGVAVYSFE GVGMVLPLES EMKDKDKFGK VLALGMGFIS LIYIAFGILG YLAFGEDTMD
301: IITANLGAGL VSTVVQLGLC INLFFTFPLM MNPVFEIVER RFSRGMYSAW LRWVLVLAVT LVALFVPNFA DFLSLVGSST CCVLGFVLPA LFHLLVFKEE
401: MGWLQWSSDT AIVVLGVVLA VSGTWSSLSE IFSVKV
Arabidopsis Description
AVT3CAmino acid transporter AVT3C [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.