CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31531	Soybean	mitochondrion	87.5	91.37
KRH58803	Soybean	mitochondrion	66.1	67.83
VIT_05s0062g01150.t01	Wine grape	plasma membrane	62.08	67.51
PGSC0003DMT400055694	Potato	extracellular, plasma membrane	50.21	64.23
HORVU4Hr1G012350.1	Barley	endoplasmic reticulum, plasma membrane	52.54	62.0
Solyc09g098380.1.1	Tomato	plasma membrane	57.63	61.54
CDY38090	Canola	plasma membrane	55.51	60.51
AT5G16740.1	Thale cress	plasma membrane	54.45	60.33
GSMUA_Achr6P06880_001	Banana	mitochondrion, plasma membrane, plastid	59.32	59.2
Bra023581.1-P	Field mustard	plasma membrane	38.56	57.78
TraesCS4A01G240700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	54.03	56.42
Zm00001d004633_P001	Maize	plasma membrane	55.08	56.03
TraesCS4D01G072600.1	Wheat	mitochondrion, plasma membrane	54.66	55.25
Os11t0298000-00	Rice	mitochondrion, plastid	55.72	54.45
TraesCS4B01G074300.1	Wheat	plasma membrane	53.6	53.49
CDX85489	Canola	vacuole	43.01	46.99
KRG99573	Soybean	cytosol, nucleus, plasma membrane	7.42	32.71
KRH30199	Soybean	extracellular, plasma membrane	24.79	31.37
KRG89633	Soybean	plasma membrane	26.48	30.71
KRH40411	Soybean	plasma membrane	17.37	30.48
KRH38592	Soybean	endoplasmic reticulum	15.04	29.71
KRH27948	Soybean	plasma membrane	10.81	29.48
KRH16006	Soybean	cytosol	21.19	29.33
KRG98240	Soybean	plasma membrane	26.69	28.83
KRH30194	Soybean	plasma membrane	26.27	28.38
KRH01177	Soybean	plasma membrane	25.42	27.97
KRH40095	Soybean	plasma membrane	25.21	27.93
KRH40094	Soybean	plasma membrane	25.0	27.63
KRG91942	Soybean	plasma membrane	31.36	27.21
KRH33248	Soybean	cytosol, nucleus, plasma membrane	30.72	26.75
KRH34828	Soybean	plasma membrane	31.36	26.38
KRH71649	Soybean	cytosol, nucleus, plasma membrane	30.08	26.2
KRG98784	Soybean	plasma membrane	20.13	25.82
KRH33027	Soybean	plasma membrane	28.81	23.33
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	22.03	23.32
KRH77523	Soybean	cytosol, nucleus, plasma membrane	23.09	23.04
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	22.46	23.04
KRH66774	Soybean	plasma membrane	12.92	22.85
KRG99991	Soybean	cytosol, nucleus, peroxisome	13.56	22.46
KRH75803	Soybean	mitochondrion	14.41	21.73
KRH39423	Soybean	plasma membrane	17.58	19.39
KRG96325	Soybean	plasma membrane	16.53	18.48
KRH68062	Soybean	plasma membrane	16.31	18.33
KRH28932	Soybean	cytosol, plasma membrane	12.08	15.83

Protein Annotations

EntrezGene:100790897	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	EMBL:ACUP02010794	EnsemblPlantsGene:GLYMA_18G004500	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171
GO:GO:0016020	GO:GO:0016021	UniProt:K7MP71	EnsemblPlants:KRG97383	ProteinID:KRG97383	ProteinID:KRG97383.1
PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF219	TMHMM:TMhelix	UniParc:UPI000233F583	SEG:seg

Description

hypothetical protein

Coordinates

chr18:-:359344..362912

Molecular Weight (calculated)

51299.7 Da

IEP (calculated)

8.997

GRAVY (calculated)

0.600

Length

472 amino acids

Sequence
(BLAST)

001: MWGKILKSIR KSLISLQQKC MNSRKSEVDS SVSVHGVQWA NCKCCIEESN CDHINAAEGA SNVDAQRDAN ANSSFTHAVI NMVGMLIGLG QLSTPYAVEN
101: GGWSSAFLLM GLGMMCAYSS HILGICLRKN PKLTSFVDIG KHAFGSKGRN VAATIIYMEI FMALVSYTIS LHDNLTTVFL GTNLNLHLPN FSSSQLLTVV
201: AVLIAMPSLW IRDLSSISFL SSVGILMSLL IFLCVAATAL LGYVQSNHTI PVLHLHNIPS VSGLYVFGYG GHIVFPELYT AMKDPSKFTK VSIVSFAVVT
301: AIYTTLGFMG AKMFGKDVKS QITLSMAPEH IVTKIALWAT VVAPMTKYAL EFTPFAIQLE HALPSSMSAR TKTIIRGCIG SFSLLVILTL ALSVPYFEHV
401: LSLTGSLVSV AVCLILPCAF YVKICWGQIS KPLLLLNLFL IIFGFVLAVM GTISSSQLLL KNLQSHNLRH KE

Best Arabidopsis Sequence Match ( AT5G16740.1 )
(BLAST)

001: MVCVACVEEN KGCECEHEKP VRELVLEAAS ENSSFLHSVI NMVGMLIGLG QLSMPYAVES GGWMSIFLLI SFGILTTYTS HILGKCIRRN PKSKSYSDIG
101: YSAFGRHGRL IVCLFIYLEI FMALVSYTIS LHDNISAAFP ATFSNHGHFP AAKLTAVAVA IALPSLWIRD LSSISFLSSG GILMSAIIFG SVVYTAIFGG
201: VIDDGKIPVL RLENIPTVSG IYLFSFGGHI VFPNLYTSMK DPSKFTKVSI VSFATVTALY GALAITGAKM FGPSVNSQIT LSLPKHLVVT KIALWATVLT
301: PMTKYALEFA PLAIQLERSL PSTMTDRTKL VARGLMGSAL LLVILALALT VPYFGYVLSL TGSLVSVTIA VTLPSAFYLK ICWDGMTKFT RAANLGFVVL
401: GCVLGVLGSF ESSKLLVKEL VRVHGG

Arabidopsis Description

AVT1HAmino acid transporter AVT1H [Source:UniProtKB/Swiss-Prot;Acc:Q9LFE3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.