CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40094	Soybean	plasma membrane	89.95	77.52
KRH40411	Soybean	plasma membrane	52.99	72.49
KRH40095	Soybean	plasma membrane	77.72	67.14
KRH01177	Soybean	plasma membrane	76.36	65.5
PGSC0003DMT400076795	Potato	plasma membrane	47.55	52.08
VIT_14s0108g00690.t01	Wine grape	plasma membrane	56.25	49.64
VIT_14s0108g00630.t01	Wine grape	plasma membrane	57.61	49.53
Solyc03g013440.2.1	Tomato	plasma membrane	45.38	48.27
VIT_14s0108g00620.t01	Wine grape	plasma membrane	55.16	47.43
AT3G28960.2	Thale cress	plasma membrane	50.82	46.17
Bra033075.1-P	Field mustard	plasma membrane	50.54	45.93
CDY44419	Canola	plasma membrane	50.54	45.93
Bra025369.1-P	Field mustard	plasma membrane	50.27	45.68
CDX86397	Canola	plasma membrane	50.27	45.68
KRH30199	Soybean	extracellular, plasma membrane	46.2	45.58
PGSC0003DMT400076791	Potato	plasma membrane	51.9	45.48
CDX85233	Canola	plasma membrane	50.0	45.43
VIT_06s0061g00570.t01	Wine grape	plasma membrane	31.25	44.75
PGSC0003DMT400008751	Potato	plasma membrane	51.36	44.37
VIT_06s0009g01140.t01	Wine grape	plasma membrane	50.0	43.71
Solyc03g013160.2.1	Tomato	plasma membrane	49.73	42.96
KRH30194	Soybean	plasma membrane	49.18	41.42
KRG98240	Soybean	plasma membrane	48.91	41.19
KRG89633	Soybean	plasma membrane	40.76	36.85
KRH75803	Soybean	mitochondrion	29.62	34.82
KRG99573	Soybean	cytosol, nucleus, plasma membrane	9.24	31.78
CDY04048	Canola	plasma membrane	50.0	31.72
KRH16006	Soybean	cytosol	27.45	29.62
KRH27948	Soybean	plasma membrane	13.32	28.32
KRH38592	Soybean	endoplasmic reticulum	17.12	26.36
KRG91942	Soybean	plasma membrane	38.32	25.92
KRH71649	Soybean	cytosol, nucleus, plasma membrane	37.5	25.46
KRH33248	Soybean	cytosol, nucleus, plasma membrane	36.96	25.09
KRH66774	Soybean	plasma membrane	17.93	24.72
KRH34828	Soybean	plasma membrane	37.23	24.42
KRH33027	Soybean	plasma membrane	37.77	23.84
KRG95106	Soybean	cytosol, peroxisome, plasma membrane	28.8	23.04
KRG99991	Soybean	cytosol, nucleus, peroxisome	17.66	22.81
KRH71933	Soybean	cytosol, peroxisome, plasma membrane	27.17	22.42
KRH58803	Soybean	mitochondrion	26.63	21.3
KRH77523	Soybean	cytosol, nucleus, plasma membrane	27.17	21.14
KRG97383	Soybean	mitochondrion	25.82	20.13
KRH31531	Soybean	mitochondrion	22.55	18.36
KRH39423	Soybean	plasma membrane	18.21	15.65
KRG96325	Soybean	plasma membrane	17.66	15.4
KRH68062	Soybean	plasma membrane	17.39	15.24
KRH28932	Soybean	cytosol, plasma membrane	10.87	11.11

Protein Annotations

EMBL:ACUP02010920	EnsemblPlants:KRG98784	EnsemblPlantsGene:GLYMA_18G097700	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	PFAM:PF01490	ProteinID:KRG98784	ProteinID:KRG98784.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002964A38	UniProt:K7MQX7	MapMan:24.2.3.4.7	:

Description

hypothetical protein

Coordinates

chr18:-:10138776..10140456

Molecular Weight (calculated)

40348.0 Da

IEP (calculated)

7.461

GRAVY (calculated)

0.654

Length

368 amino acids

Sequence
(BLAST)

001: MSEELSCKSS LDVPLLPQWN HLDEKANIAS HHSTKNTIVS LFAPALMDSM QYQHVDERCM DKNSNIKTYP NIGELAFGKT GRLIISVSMY MELYLVSTGF
101: LILEGDNLSN LFPIGEIQIA GLAIGGKQLF VILVTLIILP TVWWDNLSLL SYVSTSGVFA SAFIILSISW TATFDGVGFH QKGTLVNWNG IPTAVSLYAF
201: CYRAHPVFPT LYNPMKNKHQ FSYVLFACFL LTTVGYASMA IICYLISKLA IYTTLVNPIS KFALMVTPIT DALKELLPST YRNKVTSILG STVLVMSTAI
301: VALIVPFFGD LMSLVGAFLS IMASILLPCL CYLEISGTYK KFGYEVVAIV AIIIIGIVMG ISGTTTTK

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.