Factsheet for VIT_14s0108g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0108g00630.t01	Wine grape	plasma membrane	98.32	95.79
VIT_06s0061g00570.t01	Wine grape	plasma membrane	55.4	89.88
VIT_14s0108g00620.t01	Wine grape	plasma membrane	83.21	81.07
VIT_06s0009g01140.t01	Wine grape	plasma membrane	66.67	66.03
PGSC0003DMT400076795	Potato	plasma membrane	51.32	63.69
KRH40411	Soybean	plasma membrane	41.01	63.57
PGSC0003DMT400076791	Potato	plasma membrane	63.07	62.62
KRH40095	Soybean	plasma membrane	63.79	62.44
KRH01177	Soybean	plasma membrane	64.03	62.24
AT3G28960.2	Thale cress	plasma membrane	59.95	61.73
Bra025369.1-P	Field mustard	plasma membrane	59.47	61.23
CDX86397	Canola	plasma membrane	59.47	61.23
CDX85233	Canola	plasma membrane	59.23	60.99
KRH40094	Soybean	plasma membrane	62.35	60.89
Bra033075.1-P	Field mustard	plasma membrane	58.99	60.74
CDY44419	Canola	plasma membrane	58.99	60.74
Solyc03g013440.2.1	Tomato	plasma membrane	50.12	60.4
PGSC0003DMT400008751	Potato	plasma membrane	61.15	59.86
KRH30199	Soybean	extracellular, plasma membrane	53.0	59.25
Solyc03g013160.2.1	Tomato	plasma membrane	60.19	58.92
VIT_01s0026g02500.t01	Wine grape	plasma membrane	56.12	56.93
KRG98784	Soybean	plasma membrane	49.64	56.25
KRG98240	Soybean	plasma membrane	57.79	55.15
VIT_19s0027g01890.t01	Wine grape	plasma membrane	45.56	54.76
KRH30194	Soybean	plasma membrane	57.31	54.69
VIT_19s0027g01860.t01	Wine grape	plasma membrane, plastid	51.32	52.97
VIT_19s0027g01880.t01	Wine grape	plasma membrane	50.84	52.09
VIT_19s0027g01870.t01	Wine grape	plasma membrane, plastid	50.12	51.35
CDY04048	Canola	plasma membrane	58.27	41.9
KRH75803	Soybean	mitochondrion	31.18	41.53
VIT_08s0007g05210.t01	Wine grape	plasma membrane	39.81	32.11
VIT_13s0019g04660.t01	Wine grape	cytosol, nucleus, plasma membrane	42.21	31.26
VIT_05s0062g01150.t01	Wine grape	plasma membrane	31.89	30.65
VIT_03s0038g03900.t01	Wine grape	plasma membrane	22.3	21.83
VIT_05s0062g01130.t01	Wine grape	plasma membrane	16.79	21.81
VIT_07s0031g02140.t01	Wine grape	plasma membrane	20.86	20.62

Protein Annotations

EntrezGene:100854125	wikigene:100854125	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	ProteinID:CBI22210	ProteinID:CBI22210.3
UniProt:D7SXB3	EMBL:FN595239	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100854125
wikigene:LOC100854125	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF280	TMHMM:TMhelix	UniParc:UPI00015C9FA1
ArrayExpress:VIT_14s0108g00690	EnsemblPlantsGene:VIT_14s0108g00690	EnsemblPlants:VIT_14s0108g00690.t01	RefSeq:XP_003633855	RefSeq:XP_003633855.1	SEG:seg

Description

No Description!

Coordinates

chr14:-:29390984..29392813

Molecular Weight (calculated)

45624.8 Da

IEP (calculated)

8.119

GRAVY (calculated)

0.727

Length

417 amino acids

Sequence
(BLAST)

001: MEAEQRDGFT LTKVEDIESN GGKQDVGSTS FFKTCFNGLN ALSGVGILSI PYALSSGGWL SLVLLLVIAT ATFYTGLLLR RCMDAHPNIR TYPDVGERAF
101: GKKGRLLVSV FMYTELYLVA TGFLILEGDN LHNLFPNMGL EIWGLMIDGR QSFIIIVGLV ILPSVWVNNL SILSYISASG VLACIIILGS ILWTGAFDGV
201: GFDEKGTSLN WQGIPTAVSL YAFCYCAHPV FPTLYTSMRK KHQFSNVLLV CFIFCTITYA AMAILGYLMF GSNVQSQITL NLPIEKLSSR IAIYTTLVNP
301: ISKYALMVTP IVNATENWLP YYYKKRPFSL IIRSTLVFST IIVALTVPFF GSLMSLVGAL LSVPASILLP CLCYLKISGI YHKFGVELVI IIGVVLMGIS
401: AGIMGTYTSI VEIIGQL

Best Arabidopsis Sequence Match ( AT3G28960.1 )
(BLAST)

001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV

Arabidopsis Description

AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.