Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44419 | Canola | plasma membrane | 68.28 | 97.78 |
| CDX86397 | Canola | plasma membrane | 64.83 | 92.84 |
| CDX85233 | Canola | plasma membrane | 64.66 | 92.59 |
| AT3G28960.2 | Thale cress | plasma membrane | 61.03 | 87.41 |
| VIT_14s0108g00690.t01 | Wine grape | plasma membrane | 41.9 | 58.27 |
| VIT_14s0108g00630.t01 | Wine grape | plasma membrane | 41.55 | 56.31 |
| PGSC0003DMT400076795 | Potato | plasma membrane | 32.24 | 55.65 |
| KRH40411 | Soybean | plasma membrane | 25.69 | 55.39 |
| VIT_06s0061g00570.t01 | Wine grape | plasma membrane | 24.48 | 55.25 |
| VIT_14s0108g00620.t01 | Wine grape | plasma membrane | 40.34 | 54.67 |
| KRH40095 | Soybean | plasma membrane | 40.0 | 54.46 |
| KRH40094 | Soybean | plasma membrane | 39.31 | 53.4 |
| KRH30199 | Soybean | extracellular, plasma membrane | 34.31 | 53.35 |
| VIT_06s0009g01140.t01 | Wine grape | plasma membrane | 38.45 | 52.97 |
| KRH01177 | Soybean | plasma membrane | 39.14 | 52.91 |
| PGSC0003DMT400076791 | Potato | plasma membrane | 38.1 | 52.62 |
| PGSC0003DMT400008751 | Potato | plasma membrane | 37.93 | 51.64 |
| Solyc03g013160.2.1 | Tomato | plasma membrane | 37.76 | 51.41 |
| CDX85556 | Canola | plasma membrane | 37.93 | 51.28 |
| CDX91000 | Canola | plasma membrane | 37.93 | 51.16 |
| Solyc03g013440.2.1 | Tomato | plasma membrane | 30.0 | 50.29 |
| KRG98784 | Soybean | plasma membrane | 31.72 | 50.0 |
| KRG98240 | Soybean | plasma membrane | 36.21 | 48.05 |
| KRH30194 | Soybean | plasma membrane | 36.03 | 47.83 |
| KRH75803 | Soybean | mitochondrion | 20.52 | 38.02 |
| CDX80808 | Canola | plasma membrane | 14.14 | 32.41 |
| CDY35425 | Canola | plasma membrane | 28.62 | 31.92 |
| CDY22507 | Canola | plasma membrane | 28.45 | 31.73 |
| CDY67831 | Canola | cytosol, peroxisome, plasma membrane | 28.1 | 30.58 |
| CDY06942 | Canola | cytosol, peroxisome, plasma membrane | 28.1 | 30.52 |
| CDY23868 | Canola | cytosol, nucleus, plasma membrane | 27.76 | 30.43 |
| CDX79951 | Canola | cytosol, nucleus, plasma membrane | 27.59 | 30.25 |
| CDX73972 | Canola | extracellular, plastid | 6.72 | 29.77 |
| CDY38090 | Canola | plasma membrane | 21.38 | 28.64 |
| CDY18351 | Canola | plastid | 24.48 | 27.9 |
| CDY10463 | Canola | plasma membrane | 25.86 | 27.47 |
| CDY07919 | Canola | cytosol, nucleus, plasma membrane | 25.0 | 27.46 |
| CDY40336 | Canola | plasma membrane | 25.69 | 27.24 |
| CDY55126 | Canola | plasma membrane | 24.14 | 27.24 |
| CDY44630 | Canola | plasma membrane | 25.0 | 26.41 |
| CDX74865 | Canola | plasma membrane | 25.0 | 26.27 |
| CDX78269 | Canola | plasma membrane | 23.79 | 26.04 |
| CDX73443 | Canola | cytosol, nucleus, plasma membrane | 23.79 | 25.7 |
| CDX93284 | Canola | cytosol, nucleus, plasma membrane | 24.14 | 25.64 |
| CDY55127 | Canola | cytosol, plasma membrane, plastid | 25.69 | 25.51 |
| CDX73974 | Canola | cytosol, nucleus, plasma membrane | 17.93 | 25.43 |
| CDX80809 | Canola | plasma membrane | 25.52 | 24.96 |
| CDY70145 | Canola | plasma membrane | 16.21 | 23.33 |
| CDY21456 | Canola | plasma membrane | 16.03 | 23.08 |
| CDX85489 | Canola | vacuole | 16.55 | 22.22 |
| CDY53922 | Canola | plasma membrane | 15.69 | 21.36 |
| CDX73848 | Canola | plasma membrane | 15.69 | 21.36 |
| CDY42861 | Canola | peroxisome | 15.69 | 21.26 |
| CDY47026 | Canola | peroxisome, plastid | 15.69 | 21.11 |
| CDY59097 | Canola | plastid | 16.03 | 20.99 |
| CDY54797 | Canola | plastid | 16.03 | 20.9 |
| CDY08487 | Canola | plasma membrane | 14.66 | 20.38 |
| CDY01068 | Canola | plasma membrane | 14.66 | 20.29 |
Protein Annotations
| EnsemblPlants:CDY04048 | EnsemblPlantsGene:GSBRNA2T00117648001 | Gene3D:1.10.238.200 | GO:A0A078EWZ7 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:AA_transpt_TM | InterPro:IPR005176 | InterPro:PONY_dom | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF280 |
| PFAM:PF01490 | PFAM:PF03556 | ProteinID:CDY04048 | ProteinID:CDY04048.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE50BB | MapMan:24.2.3.4.7 | : | : | : | : |
Description
BnaC02g37630D
Coordinates
chrLK031948:-:787713..794942
Molecular Weight (calculated)
64721.6 Da
IEP (calculated)
7.417
GRAVY (calculated)
0.522
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRNVKQFTY MSNHVYIANF DTIYMYIELI LSFGIGVDSV YLLPRVGFSE FTRFYEYLLY IECCVAVGRA ITAWELVLAG RFWLLNYWCD YIEKNQRHNI
101: TEDNTWQQVL AFSGCVHENL EGYDSEGTKS ILDFSLKQVC LCFGLFYYGL VFDSQVLGPV LIDEFVEHVY RKVSAMEEDN HEKQLDDGGS SSLFKTCFNA
201: LNAFSGIGIL SVPYSLARGG WMSLSLLLLL AAAAFYTSLL ITKCMNADRS VKTYPDIGER AFGRPGRIIV SVFMHLELYL VTTGFLILEG DNLHNLFPGF
301: NIKMIGLSLN GKQSFMASVA LVIMPTLWWD NLSVLSYVSM SGVLATVLTL GSISWVGAVD GIGFRQSGKL INWSGIPTAL SLYAFCYGAH PVLPTLYNSM
401: KSKHQFNNVL LISFILCTIG YTSMAVLGYL MYGSNTLSQI TLNLPTHKTS SKVAIYTTLV NPIAKYALMI TPTVNTIKDW FPSRYAKKTY LHLLISTLCI
501: ASSVVIAETF PFFGYMMSLV GALLSVTVSI ILPCLCYLKI SGSFKKFGFE TIMLFGMVAM CVPIGVLGTY IAIRELVISV
101: TEDNTWQQVL AFSGCVHENL EGYDSEGTKS ILDFSLKQVC LCFGLFYYGL VFDSQVLGPV LIDEFVEHVY RKVSAMEEDN HEKQLDDGGS SSLFKTCFNA
201: LNAFSGIGIL SVPYSLARGG WMSLSLLLLL AAAAFYTSLL ITKCMNADRS VKTYPDIGER AFGRPGRIIV SVFMHLELYL VTTGFLILEG DNLHNLFPGF
301: NIKMIGLSLN GKQSFMASVA LVIMPTLWWD NLSVLSYVSM SGVLATVLTL GSISWVGAVD GIGFRQSGKL INWSGIPTAL SLYAFCYGAH PVLPTLYNSM
401: KSKHQFNNVL LISFILCTIG YTSMAVLGYL MYGSNTLSQI TLNLPTHKTS SKVAIYTTLV NPIAKYALMI TPTVNTIKDW FPSRYAKKTY LHLLISTLCI
501: ASSVVIAETF PFFGYMMSLV GALLSVTVSI ILPCLCYLKI SGSFKKFGFE TIMLFGMVAM CVPIGVLGTY IAIRELVISV
001: MEEDNQEIQR DNVGSSSFFK TCFNALNALS GIGILSVPYS LARGGWLSLS LLLLLAVTAF YTSLLITKCM NADRNIKTYP DIGERAFGRP GRIIVSVFMH
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
101: LELYLVTTGF LILEGDNLHN LFPGFTIEMI GLRLNGKQAF MATVAFVIMP TLWWDNLSVL SYVSMSGVLA TTVTLGSISW IGAFDGIGFH QKGKLINWSG
201: IPTALSLYAF CYGAHPVLPT LYSSMKSKHQ FNNVLLICFI LCTIGYTSMA VLGYLMYGSQ TLSQITLNLP IHKTSSKVAI YTTLVNPVAK YALMITPTVN
301: TIKDWFPSRY SKKAYLHLLI STFFIISSVV IAETLPFFGY MMSLVGALLS VTVSILLPCL CYLKIFGNYK KIGCETIMLF GMVVMSVFVG VIGTYIALRD
401: IIGSV
Arabidopsis Description
AVT1IAmino acid transporter AVT1I [Source:UniProtKB/Swiss-Prot;Acc:F4J1Q9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.